Wall clock time and date at job start Mon Mar 30 2020 06:08:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34719 * 116.99899 * 2 1 4 4 O 1.21473 * 120.00259 * 359.97438 * 3 2 1 5 5 C 1.47664 * 119.99494 * 180.02562 * 3 2 1 6 6 C 1.39534 * 120.12168 * 0.02562 * 5 3 2 7 7 C 1.38744 * 119.76501 * 179.97438 * 6 5 3 8 8 N 1.39372 * 119.99589 * 180.02562 * 7 6 5 9 9 C 1.36846 * 119.99839 * 179.97438 * 8 7 6 10 10 H 1.07997 * 119.99965 * 0.02562 * 9 8 7 11 11 C 1.38782 * 119.99646 * 179.97438 * 9 8 7 12 12 N 1.31603 * 120.00224 * 0.02562 * 11 9 8 13 13 Si 1.86796 * 120.00079 * 180.02562 * 11 9 8 14 14 H 1.48500 * 109.47344 * 59.99592 * 13 11 9 15 15 H 1.48498 * 109.47694 * 179.97438 * 13 11 9 16 16 H 1.48502 * 109.47214 * 299.99973 * 13 11 9 17 17 C 1.39235 * 120.01014 * 0.02562 * 7 6 5 18 18 C 1.38093 * 120.23337 * 359.96148 * 17 7 6 19 19 C 1.38227 * 120.24095 * 0.03939 * 18 17 7 20 20 Cl 1.73603 * 120.00785 * 180.25458 * 19 18 17 21 21 H 1.09002 * 109.47368 * 300.00392 * 1 2 3 22 22 H 1.08998 * 109.47356 * 59.99931 * 1 2 3 23 23 H 1.08997 * 109.47629 * 180.02562 * 1 2 3 24 24 H 1.08003 * 120.11579 * 359.95545 * 6 5 3 25 25 H 0.96994 * 119.99567 * 359.97438 * 8 7 6 26 26 H 0.97006 * 119.99962 * 180.02562 * 12 11 9 27 27 H 1.07996 * 119.88110 * 180.02562 * 17 7 6 28 28 H 1.08004 * 119.88026 * 180.02562 * 18 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0636 1.2004 0.0000 4 8 1.4020 2.2191 -0.0005 5 6 3.5382 1.2775 -0.0006 6 6 4.3005 0.1089 -0.0017 7 6 5.6856 0.1900 -0.0027 8 7 6.4518 -0.9742 -0.0043 9 6 7.8179 -0.8943 -0.0059 10 1 8.3023 0.0710 -0.0055 11 6 8.5808 -2.0536 -0.0070 12 7 7.9905 -3.2298 -0.0070 13 14 10.4456 -1.9446 -0.0084 14 1 10.8999 -1.2172 1.2039 15 1 11.0216 -3.3133 -0.0088 16 1 10.8979 -1.2163 -1.2210 17 6 6.3103 1.4344 -0.0022 18 6 5.5560 2.5911 -0.0014 19 6 4.1755 2.5219 -0.0003 20 17 3.2331 3.9799 -0.0060 21 1 -0.3634 0.5139 0.8900 22 1 -0.3634 0.5138 -0.8899 23 1 -0.3634 -1.0276 0.0005 24 1 3.8142 -0.8554 -0.0013 25 1 6.0166 -1.8411 -0.0043 26 1 8.5238 -4.0401 -0.0074 27 1 7.3886 1.4951 -0.0034 28 1 6.0465 3.5533 -0.0014 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000308914322.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:08:40 Heat of formation + Delta-G solvation = -59.824968 kcal Electronic energy + Delta-G solvation = -16007.672654 eV Core-core repulsion = 13049.810791 eV Total energy + Delta-G solvation = -2957.861863 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 255.045 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -40.04103 -38.40265 -36.24341 -35.63620 -34.80728 -32.06424 -30.85437 -28.18284 -27.42639 -24.90842 -23.31776 -21.68379 -20.12608 -18.15519 -17.47050 -16.71013 -15.99900 -15.61428 -15.45349 -14.76233 -14.25899 -13.50537 -13.38921 -13.33841 -12.89284 -12.55400 -12.02890 -11.88911 -11.69786 -11.32847 -11.12089 -11.07867 -10.79887 -10.53628 -10.51245 -10.28328 -9.98561 -9.30321 -8.86397 -8.40538 -6.94039 -6.78981 -3.94675 1.35754 2.17154 2.98610 3.00738 3.05837 3.07110 3.15497 3.19223 3.87908 4.38800 4.91468 4.97990 5.22594 5.24874 5.30998 5.50776 5.62412 6.02697 6.10548 6.33431 6.48862 6.66735 6.73702 6.94985 7.11930 7.16708 7.38320 7.63882 8.18190 8.51811 9.06274 9.26643 10.36273 Molecular weight = 255.04amu Principal moments of inertia in cm(-1) A = 0.029103 B = 0.005547 C = 0.004670 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 961.876590 B = 5046.999040 C = 5993.729959 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.038 3.962 2 O -0.357 6.357 3 C 0.505 3.495 4 O -0.495 6.495 5 C -0.061 4.061 6 C -0.169 4.169 7 C 0.191 3.809 8 N -0.544 5.544 9 C -0.304 4.304 10 H 0.106 0.894 11 C 0.024 3.976 12 N -0.882 5.882 13 Si 0.935 3.065 14 H -0.270 1.270 15 H -0.281 1.281 16 H -0.270 1.270 17 C -0.189 4.189 18 C -0.056 4.056 19 C -0.113 4.113 20 Cl -0.083 7.083 21 H 0.059 0.941 22 H 0.059 0.941 23 H 0.097 0.903 24 H 0.127 0.873 25 H 0.403 0.597 26 H 0.279 0.721 27 H 0.128 0.872 28 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.412 4.382 0.007 7.766 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.056 4.056 2 O -0.274 6.274 3 C 0.350 3.650 4 O -0.383 6.383 5 C -0.064 4.064 6 C -0.194 4.194 7 C 0.067 3.933 8 N -0.143 5.143 9 C -0.434 4.434 10 H 0.124 0.876 11 C -0.181 4.181 12 N -0.517 5.517 13 Si 0.761 3.239 14 H -0.195 1.195 15 H -0.206 1.206 16 H -0.195 1.195 17 C -0.214 4.214 18 C -0.076 4.076 19 C -0.144 4.144 20 Cl -0.055 7.055 21 H 0.078 0.922 22 H 0.078 0.922 23 H 0.115 0.885 24 H 0.145 0.855 25 H 0.238 0.762 26 H 0.089 0.911 27 H 0.146 0.854 28 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -6.331 4.393 0.005 7.705 hybrid contribution 0.441 -0.353 0.000 0.564 sum -5.890 4.040 0.006 7.142 Atomic orbital electron populations 1.23168 0.77023 1.03182 1.02210 1.86598 1.22694 1.33362 1.84703 1.21420 0.89473 0.81138 0.72972 1.90862 1.66831 1.35386 1.45208 1.18249 0.87737 0.93010 1.07381 1.20462 0.91863 0.96884 1.10165 1.17717 0.89818 0.87904 0.97847 1.41103 1.05612 1.04704 1.62930 1.19765 0.80881 0.94939 1.47824 0.87632 1.25379 1.01489 0.94523 0.96724 1.69675 1.37464 0.97862 1.46748 0.85829 0.80902 0.77852 0.79324 1.19497 1.20565 1.19490 1.20551 0.99742 0.90116 1.10962 1.20441 0.90659 0.98232 0.98296 1.20003 0.91172 0.85161 1.18086 1.98295 1.73349 1.36370 1.97440 0.92196 0.92189 0.88468 0.85547 0.76184 0.91062 0.85410 0.86090 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.45 10.56 101.05 1.07 1.52 15 2 O -0.36 -5.81 9.81 -40.54 -0.40 -6.20 15 3 C 0.50 9.38 7.89 34.58 0.27 9.65 15 4 O -0.49 -9.72 13.75 -19.24 -0.26 -9.98 15 5 C -0.06 -1.18 5.87 -104.98 -0.62 -1.80 15 6 C -0.17 -3.31 9.46 -38.91 -0.37 -3.67 15 7 C 0.19 3.98 6.61 -83.87 -0.55 3.42 15 8 N -0.54 -12.36 5.44 -9.63 -0.05 -12.41 15 9 C -0.30 -7.20 9.55 -15.11 -0.14 -7.35 15 10 H 0.11 2.36 5.67 -52.49 -0.30 2.06 15 11 C 0.02 0.57 5.50 -17.45 -0.10 0.47 15 12 N -0.88 -22.06 13.05 55.49 0.72 -21.33 15 13 Si 0.94 18.50 29.55 -169.99 -5.02 13.48 15 14 H -0.27 -5.27 7.11 56.52 0.40 -4.87 15 15 H -0.28 -5.57 7.11 56.52 0.40 -5.16 15 16 H -0.27 -5.27 7.11 56.52 0.40 -4.87 15 17 C -0.19 -3.69 9.30 -39.26 -0.37 -4.05 15 18 C -0.06 -1.02 9.80 -39.64 -0.39 -1.41 15 19 C -0.11 -2.16 6.36 -39.00 -0.25 -2.40 15 20 Cl -0.08 -1.51 26.01 -51.86 -1.35 -2.86 15 21 H 0.06 0.69 8.14 -51.93 -0.42 0.26 15 22 H 0.06 0.69 8.14 -51.93 -0.42 0.26 15 23 H 0.10 0.85 8.14 -51.93 -0.42 0.43 15 24 H 0.13 2.32 7.61 -52.48 -0.40 1.92 15 25 H 0.40 9.28 7.89 -40.82 -0.32 8.96 15 26 H 0.28 6.62 8.31 -40.82 -0.34 6.28 15 27 H 0.13 2.42 5.94 -52.49 -0.31 2.11 15 28 H 0.12 1.89 8.06 -52.48 -0.42 1.46 15 LS Contribution 267.74 15.07 4.03 4.03 Total: -1.00 -26.10 267.74 -5.92 -32.03 By element: Atomic # 1 Polarization: 11.01 SS G_CDS: -2.16 Total: 8.86 kcal Atomic # 6 Polarization: -4.17 SS G_CDS: -1.44 Total: -5.61 kcal Atomic # 7 Polarization: -34.41 SS G_CDS: 0.67 Total: -33.74 kcal Atomic # 8 Polarization: -15.52 SS G_CDS: -0.66 Total: -16.18 kcal Atomic # 14 Polarization: 18.50 SS G_CDS: -5.02 Total: 13.48 kcal Atomic # 17 Polarization: -1.51 SS G_CDS: -1.35 Total: -2.86 kcal Total LS contribution 4.03 Total: 4.03 kcal Total: -26.10 -5.92 -32.03 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000308914322.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.799 kcal (2) G-P(sol) polarization free energy of solvation -26.101 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.900 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.925 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.026 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.825 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds