Wall clock time and date at job start Mon Mar 30 2020 06:31:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.36029 * 117.00025 * 2 1 4 4 C 1.38495 * 120.07181 * 359.73015 * 3 2 1 5 5 C 1.38275 * 120.03014 * 179.71714 * 4 3 2 6 6 C 1.38361 * 120.17244 * 0.55831 * 5 4 3 7 7 Cl 1.73594 * 119.93621 * 179.74313 * 6 5 4 8 8 C 1.38322 * 120.12797 * 359.72017 * 6 5 4 9 9 C 1.38724 * 119.96911 * 359.97438 * 8 6 5 10 10 N 1.39963 * 120.08278 * 180.02562 * 9 8 6 11 11 C 1.46504 * 119.99783 * 359.97438 * 10 9 8 12 12 H 1.09001 * 109.47274 * 34.99496 * 11 10 9 13 13 C 1.52999 * 109.46889 * 274.99839 * 11 10 9 14 14 C 1.50700 * 109.47103 * 154.99841 * 11 10 9 15 15 H 1.07997 * 119.99867 * 5.45978 * 14 11 10 16 16 C 1.37873 * 120.00173 * 185.45414 * 14 11 10 17 17 N 1.31520 * 119.99893 * 9.56649 * 16 14 11 18 18 Si 1.86796 * 120.00185 * 189.55769 * 16 14 11 19 19 H 1.48504 * 109.46824 * 85.00230 * 18 16 14 20 20 H 1.48495 * 109.47493 * 204.99719 * 18 16 14 21 21 H 1.48498 * 109.47323 * 325.00000 * 18 16 14 22 22 H 1.08999 * 109.47550 * 179.97438 * 1 2 3 23 23 H 1.09003 * 109.46998 * 299.99516 * 1 2 3 24 24 H 1.09000 * 109.47472 * 59.99162 * 1 2 3 25 25 H 1.08003 * 119.97750 * 359.97438 * 4 3 2 26 26 H 1.08001 * 119.91375 * 180.27778 * 5 4 3 27 27 H 1.08002 * 120.01213 * 180.02562 * 8 6 5 28 28 H 0.96996 * 120.00259 * 179.97438 * 10 9 8 29 29 H 1.09003 * 109.47277 * 303.65987 * 13 11 10 30 30 H 1.09000 * 109.47287 * 63.65812 * 13 11 10 31 31 H 1.09000 * 109.46910 * 183.66232 * 13 11 10 32 32 H 0.97000 * 119.99960 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0466 1.2120 0.0000 4 6 1.2937 2.3745 -0.0056 5 6 1.9223 3.6061 0.0003 6 6 3.3039 3.6817 0.0002 7 17 4.0867 5.2311 0.0009 8 6 4.0625 2.5250 0.0000 9 6 3.4377 1.2865 0.0005 10 7 4.2030 0.1146 0.0008 11 6 5.6658 0.1951 0.0002 12 1 5.9826 1.0560 0.5889 13 6 6.1674 0.3477 -1.4372 14 6 6.2383 -1.0627 0.6012 15 1 5.5845 -1.8799 0.8676 16 6 7.5968 -1.1702 0.8108 17 7 8.3700 -0.1162 0.6654 18 14 8.3391 -2.8125 1.3015 19 1 8.6073 -3.6182 0.0832 20 1 9.6110 -2.5823 2.0325 21 1 7.3892 -3.5428 2.1787 22 1 -0.3634 -1.0276 -0.0005 23 1 -0.3633 0.5138 0.8901 24 1 -0.3634 0.5140 -0.8899 25 1 0.2151 2.3189 -0.0105 26 1 1.3334 4.5114 0.0004 27 1 5.1408 2.5862 0.0004 28 1 3.7649 -0.7508 0.0015 29 1 5.7962 -0.4800 -2.0415 30 1 5.8062 1.2896 -1.8500 31 1 7.2574 0.3423 -1.4440 32 1 9.3257 -0.1917 0.8132 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000032014890.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:31:19 Heat of formation + Delta-G solvation = -23.647087 kcal Electronic energy + Delta-G solvation = -16598.405711 eV Core-core repulsion = 13777.945732 eV Total energy + Delta-G solvation = -2820.459978 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -39.86776 -37.39055 -36.22599 -35.22229 -32.74823 -30.07674 -29.64623 -27.59147 -26.81366 -25.19720 -22.35751 -21.70685 -20.03700 -18.09361 -17.01845 -16.06030 -15.81463 -15.50011 -14.81591 -14.47166 -13.96404 -13.77351 -13.31580 -13.09038 -12.44483 -12.19129 -12.10660 -11.67461 -11.47424 -11.27766 -11.16738 -10.94318 -10.74542 -10.55387 -10.40102 -10.32605 -10.07271 -9.42072 -9.11143 -8.48579 -8.05000 -6.48978 -6.18030 -4.22598 1.65168 1.92451 2.56002 3.24379 3.31070 3.33196 3.54267 4.13983 4.24737 4.50242 5.04926 5.15778 5.19468 5.24869 5.43422 5.53796 5.68996 5.93443 6.11303 6.29897 6.55423 6.63019 6.74531 6.85925 6.96743 7.01257 7.26882 7.59453 7.65111 7.75569 8.02184 8.30527 8.68866 8.90022 9.42992 10.90021 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.019547 B = 0.006591 C = 0.005143 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1432.073501 B = 4247.183632 C = 5442.813727 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.318 6.318 3 C 0.033 3.967 4 C -0.150 4.150 5 C -0.162 4.162 6 C -0.008 4.008 7 Cl -0.087 7.087 8 C -0.174 4.174 9 C 0.234 3.766 10 N -0.713 5.713 11 C 0.264 3.736 12 H 0.048 0.952 13 C -0.147 4.147 14 C -0.533 4.533 15 H 0.061 0.939 16 C 0.069 3.931 17 N -0.884 5.884 18 Si 0.898 3.102 19 H -0.278 1.278 20 H -0.286 1.286 21 H -0.274 1.274 22 H 0.093 0.907 23 H 0.050 0.950 24 H 0.049 0.951 25 H 0.127 0.873 26 H 0.122 0.878 27 H 0.144 0.856 28 H 0.398 0.602 29 H 0.032 0.968 30 H 0.018 0.982 31 H 0.073 0.927 32 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.781 4.724 -1.903 13.759 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 O -0.232 6.232 3 C -0.015 4.015 4 C -0.170 4.170 5 C -0.184 4.184 6 C -0.035 4.035 7 Cl -0.058 7.058 8 C -0.198 4.198 9 C 0.123 3.877 10 N -0.335 5.335 11 C 0.162 3.838 12 H 0.066 0.934 13 C -0.206 4.206 14 C -0.571 4.571 15 H 0.080 0.920 16 C -0.135 4.135 17 N -0.521 5.521 18 Si 0.726 3.274 19 H -0.204 1.204 20 H -0.211 1.211 21 H -0.199 1.199 22 H 0.112 0.888 23 H 0.068 0.932 24 H 0.068 0.932 25 H 0.145 0.855 26 H 0.140 0.860 27 H 0.162 0.838 28 H 0.232 0.768 29 H 0.051 0.949 30 H 0.037 0.963 31 H 0.092 0.908 32 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -12.161 4.698 -1.884 13.172 hybrid contribution 0.138 -0.867 0.241 0.911 sum -12.022 3.830 -1.643 12.724 Atomic orbital electron populations 1.22915 0.79261 1.03247 1.00766 1.86010 1.20506 1.26655 1.90036 1.18498 0.90581 0.84654 1.07797 1.20727 0.99089 0.91262 1.05910 1.20298 0.92016 0.97322 1.08762 1.20441 0.92270 0.85558 1.05240 1.98326 1.81440 1.28928 1.97118 1.20450 1.00876 0.88636 1.09868 1.17235 0.86920 0.88654 0.94879 1.45525 1.07387 1.03924 1.76686 1.18789 0.73459 0.98569 0.93024 0.93429 1.22128 1.02750 0.97392 0.98356 1.21142 0.92528 1.00788 1.42637 0.92049 1.24865 0.96957 0.96783 0.94858 1.69953 1.05358 1.28236 1.48568 0.86511 0.78577 0.83741 0.78616 1.20405 1.21135 1.19889 0.88819 0.93154 0.93198 0.85549 0.85973 0.83812 0.76811 0.94919 0.96272 0.90816 0.92517 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.36 9.81 101.05 0.99 1.35 16 2 O -0.32 -5.04 9.74 -19.83 -0.19 -5.23 16 3 C 0.03 0.57 6.70 -39.09 -0.26 0.31 16 4 C -0.15 -2.19 9.04 -39.47 -0.36 -2.55 16 5 C -0.16 -2.43 9.82 -39.52 -0.39 -2.81 16 6 C -0.01 -0.13 6.32 -39.51 -0.25 -0.38 16 7 Cl -0.09 -1.34 28.95 -51.86 -1.50 -2.85 16 8 C -0.17 -3.35 8.66 -39.37 -0.34 -3.69 16 9 C 0.23 4.59 6.65 -83.57 -0.56 4.04 16 10 N -0.71 -15.28 5.24 -53.15 -0.28 -15.56 16 11 C 0.26 6.44 2.12 -69.08 -0.15 6.29 16 12 H 0.05 1.27 6.43 -51.93 -0.33 0.94 16 13 C -0.15 -3.45 9.31 37.16 0.35 -3.10 16 14 C -0.53 -14.12 8.66 -34.44 -0.30 -14.42 16 15 H 0.06 1.61 7.74 -52.49 -0.41 1.20 16 16 C 0.07 1.84 5.17 -17.82 -0.09 1.75 16 17 N -0.88 -24.50 12.16 55.43 0.67 -23.83 16 18 Si 0.90 20.69 29.55 -169.99 -5.02 15.66 16 19 H -0.28 -6.34 7.11 56.52 0.40 -5.94 16 20 H -0.29 -6.55 7.11 56.52 0.40 -6.15 16 21 H -0.27 -6.26 7.11 56.52 0.40 -5.86 16 22 H 0.09 0.80 8.14 -51.93 -0.42 0.38 16 23 H 0.05 0.48 7.68 -51.93 -0.40 0.08 16 24 H 0.05 0.47 7.65 -51.93 -0.40 0.07 16 25 H 0.13 1.44 6.30 -52.48 -0.33 1.11 16 26 H 0.12 1.53 8.06 -52.49 -0.42 1.11 16 27 H 0.14 2.99 6.06 -52.49 -0.32 2.67 16 28 H 0.40 8.29 7.89 -40.82 -0.32 7.97 16 29 H 0.03 0.73 8.14 -51.93 -0.42 0.31 16 30 H 0.02 0.40 7.68 -51.93 -0.40 0.00 16 31 H 0.07 1.86 6.83 -51.93 -0.35 1.51 16 32 H 0.27 7.00 8.31 -40.82 -0.34 6.66 16 LS Contribution 286.13 15.07 4.31 4.31 Total: -1.00 -27.61 286.13 -7.03 -34.64 By element: Atomic # 1 Polarization: 9.72 SS G_CDS: -3.66 Total: 6.06 kcal Atomic # 6 Polarization: -11.87 SS G_CDS: -1.35 Total: -13.22 kcal Atomic # 7 Polarization: -39.78 SS G_CDS: 0.40 Total: -39.38 kcal Atomic # 8 Polarization: -5.04 SS G_CDS: -0.19 Total: -5.23 kcal Atomic # 14 Polarization: 20.69 SS G_CDS: -5.02 Total: 15.66 kcal Atomic # 17 Polarization: -1.34 SS G_CDS: -1.50 Total: -2.85 kcal Total LS contribution 4.31 Total: 4.31 kcal Total: -27.61 -7.03 -34.64 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000032014890.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.991 kcal (2) G-P(sol) polarization free energy of solvation -27.614 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.622 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.025 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.639 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.647 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds