Wall clock time and date at job start Mon Mar 30 2020 06:25:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 H 1.08991 * 109.47637 * 2 1 4 4 N 1.46906 * 109.46843 * 239.99926 * 2 1 3 5 5 C 1.53007 * 109.47206 * 120.00652 * 2 1 3 6 6 C 1.50698 * 109.47175 * 184.99819 * 5 2 1 7 7 C 1.38110 * 120.02594 * 265.27433 * 6 5 2 8 8 C 1.38391 * 120.05295 * 180.30242 * 7 6 5 9 9 Cl 1.73604 * 119.94164 * 179.70209 * 8 7 6 10 10 C 1.38424 * 120.11217 * 359.67436 * 8 7 6 11 11 C 1.38065 * 120.05819 * 0.04309 * 10 8 7 12 12 C 1.38847 * 120.02994 * 84.99969 * 6 5 2 13 13 O 1.35769 * 120.05832 * 359.97438 * 12 6 5 14 14 C 1.34816 * 117.00251 * 185.33054 * 13 12 6 15 15 H 1.07999 * 120.00013 * 354.93794 * 14 13 12 16 16 C 1.38655 * 120.00238 * 174.93820 * 14 13 12 17 17 N 1.31559 * 119.99467 * 359.72167 * 16 14 13 18 18 Si 1.86798 * 120.00258 * 180.02562 * 16 14 13 19 19 H 1.48498 * 109.47325 * 359.97438 * 18 16 14 20 20 H 1.48494 * 109.47208 * 119.99867 * 18 16 14 21 21 H 1.48499 * 109.46945 * 240.00076 * 18 16 14 22 22 H 1.09008 * 109.46587 * 299.99920 * 1 2 3 23 23 H 1.09001 * 109.46763 * 59.99290 * 1 2 3 24 24 H 1.08997 * 109.47242 * 179.97438 * 1 2 3 25 25 H 1.00899 * 110.99958 * 176.04779 * 4 2 1 26 26 H 1.00900 * 110.99969 * 300.00482 * 4 2 1 27 27 H 1.08997 * 109.47168 * 64.99317 * 5 2 1 28 28 H 1.09000 * 109.46558 * 304.99597 * 5 2 1 29 29 H 1.08000 * 119.97361 * 359.97438 * 7 6 5 30 30 H 1.08006 * 119.97055 * 180.02562 * 10 8 7 31 31 H 1.07994 * 120.02922 * 179.97438 * 11 10 8 32 32 H 0.97001 * 119.99928 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0275 0.0000 4 7 2.0196 -0.6926 -1.1995 5 6 2.0401 -0.7214 1.2492 6 6 3.5420 -0.6151 1.3127 7 6 4.3287 -1.6288 0.8019 8 6 5.7080 -1.5347 0.8655 9 17 6.6941 -2.8141 0.2296 10 6 6.3025 -0.4218 1.4348 11 6 5.5205 0.5970 1.9416 12 6 4.1360 0.5046 1.8795 13 8 3.3648 1.5053 2.3767 14 6 4.0022 2.6107 2.8118 15 1 5.0816 2.6391 2.8317 16 6 3.2719 3.7113 3.2337 17 7 1.9570 3.6786 3.2043 18 14 4.1550 5.2432 3.8359 19 1 5.6227 5.0288 3.7647 20 1 3.7810 6.3984 2.9810 21 1 3.7633 5.5201 5.2413 22 1 -0.3633 0.5139 0.8901 23 1 -0.3633 0.5140 -0.8899 24 1 -0.3633 -1.0276 -0.0005 25 1 3.0262 -0.6502 -1.2560 26 1 1.6960 -1.6480 -1.2228 27 1 1.7516 -1.7716 1.2055 28 1 1.6055 -0.2619 2.1369 29 1 3.8672 -2.4981 0.3573 30 1 7.3792 -0.3505 1.4829 31 1 5.9849 1.4648 2.3860 32 1 1.4461 4.4487 3.4991 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000037725710.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:25:51 Heat of formation + Delta-G solvation = -28.589563 kcal Electronic energy + Delta-G solvation = -16782.433759 eV Core-core repulsion = 13961.759459 eV Total energy + Delta-G solvation = -2820.674300 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -39.51250 -36.98196 -36.28068 -35.31407 -32.43642 -31.10572 -29.13651 -28.52503 -25.96511 -25.45138 -21.83337 -21.30366 -19.94919 -18.17032 -17.05442 -15.88945 -15.28474 -15.04575 -14.62494 -14.20622 -13.99045 -13.64295 -13.32357 -13.00416 -12.69201 -12.40673 -11.93830 -11.74961 -11.62290 -11.44221 -11.19871 -11.01200 -10.79589 -10.54264 -10.46684 -10.36892 -10.30715 -9.47127 -8.94473 -8.51902 -8.17007 -7.27795 -6.59953 -4.17760 1.90421 2.00846 2.76242 3.04296 3.06659 3.11841 3.84809 4.26406 4.92419 5.03007 5.03356 5.26981 5.46894 5.54639 5.64359 5.75747 5.94810 6.01840 6.10905 6.26851 6.33128 6.39646 6.57507 6.61238 6.74488 6.83017 6.91311 7.07524 7.21065 7.49778 7.58674 7.83254 7.85302 8.85380 9.50454 10.56757 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.017568 B = 0.007615 C = 0.005522 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1593.409139 B = 3676.216479 C = 5069.684517 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.139 4.139 2 C 0.093 3.907 3 H 0.088 0.912 4 N -0.844 5.844 5 C -0.093 4.093 6 C -0.149 4.149 7 C -0.067 4.067 8 C -0.123 4.123 9 Cl -0.107 7.107 10 C -0.063 4.063 11 C -0.224 4.224 12 C 0.159 3.841 13 O -0.161 6.161 14 C -0.395 4.395 15 H 0.094 0.906 16 C 0.044 3.956 17 N -0.853 5.853 18 Si 0.941 3.059 19 H -0.266 1.266 20 H -0.274 1.274 21 H -0.275 1.275 22 H 0.062 0.938 23 H 0.057 0.943 24 H 0.045 0.955 25 H 0.341 0.659 26 H 0.329 0.671 27 H 0.056 0.944 28 H 0.082 0.918 29 H 0.118 0.882 30 H 0.117 0.883 31 H 0.136 0.864 32 H 0.272 0.728 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.630 -6.907 -3.565 8.206 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.197 4.197 2 C -0.019 4.019 3 H 0.106 0.894 4 N -0.372 5.372 5 C -0.132 4.132 6 C -0.150 4.150 7 C -0.086 4.086 8 C -0.150 4.150 9 Cl -0.079 7.079 10 C -0.081 4.081 11 C -0.243 4.243 12 C 0.104 3.896 13 O -0.063 6.063 14 C -0.471 4.471 15 H 0.111 0.889 16 C -0.162 4.162 17 N -0.487 5.487 18 Si 0.765 3.235 19 H -0.190 1.190 20 H -0.200 1.200 21 H -0.200 1.200 22 H 0.081 0.919 23 H 0.076 0.924 24 H 0.064 0.936 25 H 0.154 0.846 26 H 0.140 0.860 27 H 0.075 0.925 28 H 0.100 0.900 29 H 0.136 0.864 30 H 0.135 0.865 31 H 0.153 0.847 32 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges 1.829 -6.252 -3.937 7.611 hybrid contribution 1.240 -0.001 1.040 1.619 sum 3.069 -6.253 -2.897 7.544 Atomic orbital electron populations 1.21753 0.94920 1.00948 1.02068 1.21384 0.94704 0.98964 0.86799 0.89402 1.59057 1.16625 1.20234 1.41329 1.21092 0.91272 0.99909 1.00954 1.18845 0.95421 0.94606 1.06176 1.20384 0.91088 0.97825 0.99302 1.20278 0.90873 0.92682 1.11125 1.98281 1.71182 1.51902 1.86493 1.20626 0.99190 0.91897 0.96435 1.21111 0.93400 1.01234 1.08580 1.19196 0.89794 0.89461 0.91169 1.83968 1.33703 1.22446 1.66225 1.21411 0.92321 0.89941 1.43451 0.88899 1.25294 0.95690 0.98492 0.96729 1.70032 1.04961 1.30889 1.42809 0.85645 0.79179 0.80045 0.78606 1.19027 1.19979 1.20040 0.91873 0.92438 0.93572 0.84555 0.85977 0.92485 0.89963 0.86400 0.86469 0.84674 0.91839 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.13 9.49 37.16 0.35 -1.78 16 2 C 0.09 1.60 3.40 -67.70 -0.23 1.37 16 3 H 0.09 1.84 8.14 -51.93 -0.42 1.42 16 4 N -0.84 -12.83 9.17 -4.66 -0.04 -12.88 16 5 C -0.09 -1.65 4.72 -27.88 -0.13 -1.78 16 6 C -0.15 -2.86 4.61 -104.44 -0.48 -3.34 16 7 C -0.07 -1.14 8.52 -39.57 -0.34 -1.48 16 8 C -0.12 -2.11 6.32 -39.46 -0.25 -2.36 16 9 Cl -0.11 -1.61 28.95 -51.86 -1.50 -3.11 16 10 C -0.06 -1.12 9.82 -39.58 -0.39 -1.51 16 11 C -0.22 -4.58 9.17 -39.40 -0.36 -4.94 16 12 C 0.16 3.54 6.62 -39.11 -0.26 3.28 16 13 O -0.16 -4.20 8.90 0.03 0.00 -4.20 16 14 C -0.40 -10.33 9.49 30.89 0.29 -10.03 16 15 H 0.09 2.26 5.20 -52.49 -0.27 1.99 16 16 C 0.04 1.13 5.49 -17.51 -0.10 1.03 16 17 N -0.85 -23.47 13.67 55.48 0.76 -22.71 16 18 Si 0.94 19.57 29.55 -169.99 -5.02 14.54 16 19 H -0.27 -5.32 7.11 56.52 0.40 -4.92 16 20 H -0.27 -5.63 7.11 56.52 0.40 -5.23 16 21 H -0.27 -5.63 7.11 56.52 0.40 -5.23 16 22 H 0.06 1.01 8.14 -51.92 -0.42 0.59 16 23 H 0.06 0.86 8.14 -51.93 -0.42 0.44 16 24 H 0.05 0.61 8.14 -51.93 -0.42 0.19 16 25 H 0.34 5.37 7.57 -39.29 -0.30 5.07 16 26 H 0.33 4.31 9.00 -39.29 -0.35 3.95 16 27 H 0.06 0.87 8.05 -51.93 -0.42 0.45 16 28 H 0.08 1.65 7.69 -51.93 -0.40 1.25 16 29 H 0.12 1.75 8.06 -52.49 -0.42 1.33 16 30 H 0.12 1.83 8.06 -52.48 -0.42 1.41 16 31 H 0.14 2.75 5.64 -52.49 -0.30 2.46 16 32 H 0.27 6.88 8.31 -40.82 -0.34 6.54 16 LS Contribution 289.36 15.07 4.36 4.36 Total: -1.00 -26.76 289.36 -7.05 -33.81 By element: Atomic # 1 Polarization: 15.42 SS G_CDS: -3.71 Total: 11.71 kcal Atomic # 6 Polarization: -19.64 SS G_CDS: -1.89 Total: -21.53 kcal Atomic # 7 Polarization: -36.31 SS G_CDS: 0.72 Total: -35.59 kcal Atomic # 8 Polarization: -4.20 SS G_CDS: 0.00 Total: -4.20 kcal Atomic # 14 Polarization: 19.57 SS G_CDS: -5.02 Total: 14.54 kcal Atomic # 17 Polarization: -1.61 SS G_CDS: -1.50 Total: -3.11 kcal Total LS contribution 4.36 Total: 4.36 kcal Total: -26.76 -7.05 -33.81 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000037725710.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.220 kcal (2) G-P(sol) polarization free energy of solvation -26.763 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.543 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.046 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.809 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.590 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds