Wall clock time and date at job start Mon Mar 30 2020 07:00:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.53008 * 109.47287 * 2 1 4 4 N 1.46501 * 109.47324 * 240.00034 * 2 1 3 5 5 C 1.46498 * 120.00085 * 65.69844 * 4 2 1 6 6 C 1.50702 * 109.46683 * 90.00166 * 5 4 2 7 7 H 1.07995 * 120.00452 * 0.02562 * 6 5 4 8 8 C 1.37877 * 119.99451 * 179.97438 * 6 5 4 9 9 N 1.31517 * 120.00432 * 0.02562 * 8 6 5 10 10 Si 1.86800 * 119.99709 * 180.02562 * 8 6 5 11 11 H 1.48504 * 109.47349 * 0.02562 * 10 8 6 12 12 H 1.48504 * 109.47185 * 120.00351 * 10 8 6 13 13 H 1.48505 * 109.47398 * 240.00462 * 10 8 6 14 14 C 1.39114 * 119.99854 * 245.70699 * 4 2 1 15 15 C 1.39493 * 120.14368 * 10.44160 * 14 4 2 16 16 C 1.38530 * 117.91513 * 180.02562 * 15 14 4 17 17 C 1.38958 * 118.02216 * 0.02562 * 16 15 14 18 18 Cl 1.73598 * 120.00544 * 179.97438 * 17 16 15 19 19 N 1.31869 * 119.98575 * 0.02562 * 17 16 15 20 20 N 1.28351 * 122.26636 * 359.70484 * 19 17 16 21 21 H 1.08995 * 109.47299 * 59.99939 * 1 2 3 22 22 H 1.09000 * 109.47192 * 179.97438 * 1 2 3 23 23 H 1.09003 * 109.47136 * 300.00076 * 1 2 3 24 24 H 1.09000 * 109.46883 * 119.99915 * 2 1 3 25 25 H 1.08996 * 109.46753 * 55.26685 * 3 2 1 26 26 H 1.08999 * 109.46775 * 175.26996 * 3 2 1 27 27 H 1.08999 * 109.46507 * 295.26809 * 3 2 1 28 28 H 1.09000 * 109.47617 * 210.00359 * 5 4 2 29 29 H 1.08998 * 109.47278 * 330.00685 * 5 4 2 30 30 H 0.96996 * 119.99657 * 179.97438 * 9 8 6 31 31 H 1.08004 * 121.04762 * 359.97438 * 15 14 4 32 32 H 1.07998 * 120.98989 * 180.02562 * 16 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 7 2.0183 -0.6906 -1.1962 5 6 1.7703 -0.1216 -2.5231 6 6 2.9061 0.7957 -2.8966 7 1 3.7305 0.9401 -2.2140 8 6 2.8933 1.4499 -4.1102 9 7 1.8897 1.2738 -4.9417 10 14 4.3016 2.5864 -4.5734 11 1 5.2995 2.6118 -3.4739 12 1 4.9476 2.0930 -5.8163 13 1 3.7776 3.9576 -4.7987 14 6 2.7175 -1.8868 -1.0719 15 6 2.7693 -2.5435 0.1577 16 6 3.4788 -3.7311 0.2293 17 6 4.0951 -4.1942 -0.9269 18 17 4.9981 -5.6765 -0.8953 19 7 3.9946 -3.5069 -2.0478 20 7 3.3344 -2.4087 -2.1213 21 1 -0.3633 0.5138 -0.8899 22 1 -0.3633 -1.0277 -0.0005 23 1 -0.3633 0.5139 0.8900 24 1 1.8932 -0.5138 0.8900 25 1 1.6091 1.9802 0.8445 26 1 3.1267 1.4436 0.0847 27 1 1.7475 1.9312 -0.9294 28 1 1.6968 -0.9256 -3.2554 29 1 0.8377 0.4425 -2.5081 30 1 1.8806 1.7344 -5.7953 31 1 2.2724 -2.1384 1.0269 32 1 3.5509 -4.2808 1.1562 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000042530252.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:00:45 Heat of formation + Delta-G solvation = 56.989534 kcal Electronic energy + Delta-G solvation = -16855.790236 eV Core-core repulsion = 14071.119675 eV Total energy + Delta-G solvation = -2784.670561 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.083 amu Computer time = 4.57 seconds Orbital eigenvalues (eV) -40.52551 -37.54540 -36.37308 -33.06691 -32.63296 -32.35701 -29.70606 -27.17721 -26.71002 -24.43185 -23.48180 -22.29994 -19.68185 -17.49809 -17.13686 -16.51197 -16.30509 -14.82109 -14.75481 -14.27531 -13.99841 -13.41298 -13.16359 -12.99538 -12.37830 -11.95975 -11.91256 -11.70049 -11.26624 -11.21495 -11.12792 -10.90839 -10.82615 -10.67296 -10.42172 -10.16897 -9.98880 -9.78804 -9.27748 -8.97732 -8.44125 -7.13120 -6.04278 -4.08753 1.18048 1.49171 2.06972 3.29474 3.38265 3.39987 3.50987 4.03191 4.43507 4.78328 4.84838 4.94231 5.06224 5.27225 5.29385 5.42125 5.53401 5.75654 5.90377 5.97627 6.06297 6.14952 6.24136 6.26972 6.50905 6.86672 6.97381 7.35507 7.75469 7.94489 8.03784 8.19992 8.93245 9.32412 9.55195 11.02476 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.019486 B = 0.006980 C = 0.005610 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1436.566638 B = 4010.556383 C = 4989.503039 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C 0.143 3.857 3 C -0.158 4.158 4 N -0.566 5.566 5 C 0.251 3.749 6 C -0.516 4.516 7 H 0.058 0.942 8 C 0.063 3.937 9 N -0.895 5.895 10 Si 0.894 3.106 11 H -0.274 1.274 12 H -0.283 1.283 13 H -0.285 1.285 14 C 0.354 3.646 15 C -0.188 4.188 16 C -0.069 4.069 17 C 0.030 3.970 18 Cl -0.041 7.041 19 N -0.185 5.185 20 N -0.259 5.259 21 H 0.068 0.932 22 H 0.053 0.947 23 H 0.062 0.938 24 H 0.075 0.925 25 H 0.052 0.948 26 H 0.054 0.946 27 H 0.086 0.914 28 H 0.045 0.955 29 H 0.036 0.964 30 H 0.262 0.738 31 H 0.148 0.852 32 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.810 -6.270 13.161 14.601 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.221 4.221 2 C 0.039 3.961 3 C -0.216 4.216 4 N -0.274 5.274 5 C 0.132 3.868 6 C -0.555 4.555 7 H 0.076 0.924 8 C -0.139 4.139 9 N -0.534 5.534 10 Si 0.722 3.278 11 H -0.199 1.199 12 H -0.209 1.209 13 H -0.211 1.211 14 C 0.112 3.888 15 C -0.223 4.223 16 C -0.098 4.098 17 C -0.146 4.146 18 Cl -0.014 7.014 19 N -0.031 5.031 20 N -0.113 5.113 21 H 0.087 0.913 22 H 0.072 0.928 23 H 0.080 0.920 24 H 0.093 0.907 25 H 0.071 0.929 26 H 0.074 0.926 27 H 0.105 0.895 28 H 0.063 0.937 29 H 0.054 0.946 30 H 0.072 0.928 31 H 0.166 0.834 32 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -0.582 -5.962 11.368 12.850 hybrid contribution 0.567 0.373 1.163 1.347 sum -0.014 -5.589 12.532 13.721 Atomic orbital electron populations 1.22198 0.95362 1.01920 1.02646 1.21051 0.93949 0.94017 0.87100 1.22158 1.01266 0.95006 1.03130 1.47387 1.52573 1.18173 1.09242 1.19386 0.96692 0.94382 0.76327 1.21405 1.06179 1.25594 1.02317 0.92367 1.24890 0.95976 0.96996 0.96056 1.69927 1.30795 1.43149 1.09502 0.86503 0.82425 0.80204 0.78650 1.19909 1.20856 1.21110 1.20257 0.89387 0.88505 0.90695 1.21870 1.04814 0.96695 0.98875 1.21769 0.94539 0.95323 0.98154 1.22966 1.03584 0.94139 0.93865 1.98345 1.73545 1.31010 1.98466 1.72756 1.08496 0.99923 1.21940 1.73517 1.09246 1.04378 1.24208 0.91283 0.92825 0.91955 0.90726 0.92918 0.92638 0.89541 0.93716 0.94596 0.92788 0.83425 0.83548 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.20 9.26 37.15 0.34 -1.85 16 2 C 0.14 2.20 3.11 -67.93 -0.21 1.99 16 3 C -0.16 -2.50 8.51 37.16 0.32 -2.19 16 4 N -0.57 -11.21 2.50 -167.45 -0.42 -11.63 16 5 C 0.25 6.10 4.39 -5.19 -0.02 6.08 16 6 C -0.52 -13.76 7.72 -34.44 -0.27 -14.03 16 7 H 0.06 1.59 7.69 -52.49 -0.40 1.18 16 8 C 0.06 1.73 5.46 -17.82 -0.10 1.63 16 9 N -0.89 -25.76 13.29 55.43 0.74 -25.03 16 10 Si 0.89 21.59 29.54 -169.99 -5.02 16.57 16 11 H -0.27 -6.59 7.11 56.52 0.40 -6.19 16 12 H -0.28 -6.91 7.11 56.52 0.40 -6.50 16 13 H -0.28 -6.72 7.11 56.52 0.40 -6.32 16 14 C 0.35 6.97 7.40 -154.74 -1.15 5.82 16 15 C -0.19 -2.83 9.32 -39.01 -0.36 -3.19 16 16 C -0.07 -0.96 9.99 -39.21 -0.39 -1.35 16 17 C 0.03 0.51 7.37 -17.27 -0.13 0.38 16 18 Cl -0.04 -0.58 29.13 -51.86 -1.51 -2.09 16 19 N -0.19 -3.86 11.48 32.90 0.38 -3.49 16 20 N -0.26 -5.87 10.44 31.24 0.33 -5.55 16 21 H 0.07 1.06 6.90 -51.93 -0.36 0.70 16 22 H 0.05 0.70 8.14 -51.93 -0.42 0.27 16 23 H 0.06 0.67 8.14 -51.93 -0.42 0.25 16 24 H 0.07 0.96 5.55 -51.93 -0.29 0.67 16 25 H 0.05 0.66 8.14 -51.93 -0.42 0.24 16 26 H 0.05 0.93 8.14 -51.93 -0.42 0.51 16 27 H 0.09 1.64 6.58 -51.93 -0.34 1.29 16 28 H 0.04 1.23 7.57 -51.93 -0.39 0.84 16 29 H 0.04 0.89 6.70 -51.93 -0.35 0.54 16 30 H 0.26 7.19 8.31 -40.82 -0.34 6.85 16 31 H 0.15 1.72 6.07 -52.48 -0.32 1.40 16 32 H 0.15 1.46 8.06 -52.49 -0.42 1.03 16 LS Contribution 286.24 15.07 4.31 4.31 Total: -1.00 -29.96 286.24 -6.86 -36.83 By element: Atomic # 1 Polarization: 0.48 SS G_CDS: -3.70 Total: -3.22 kcal Atomic # 6 Polarization: -4.74 SS G_CDS: -1.97 Total: -6.70 kcal Atomic # 7 Polarization: -46.71 SS G_CDS: 1.02 Total: -45.69 kcal Atomic # 14 Polarization: 21.59 SS G_CDS: -5.02 Total: 16.57 kcal Atomic # 17 Polarization: -0.58 SS G_CDS: -1.51 Total: -2.09 kcal Total LS contribution 4.31 Total: 4.31 kcal Total: -29.96 -6.86 -36.83 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000042530252.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 93.817 kcal (2) G-P(sol) polarization free energy of solvation -29.965 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 63.853 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.863 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.828 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.990 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 4.57 seconds