Wall clock time and date at job start Mon Mar 30 2020 06:25:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 H 1.08997 * 109.47012 * 2 1 4 4 N 1.46897 * 109.46851 * 239.99988 * 2 1 3 5 5 C 1.52996 * 109.47337 * 119.99605 * 2 1 3 6 6 C 1.50702 * 109.47222 * 184.99972 * 5 2 1 7 7 C 1.38320 * 119.92441 * 90.00137 * 6 5 2 8 8 C 1.38098 * 120.08866 * 179.97438 * 7 6 5 9 9 C 1.38864 * 119.94691 * 0.02562 * 8 7 6 10 10 O 1.35763 * 120.07668 * 180.02562 * 9 8 7 11 11 C 1.34834 * 116.99621 * 354.39506 * 10 9 8 12 12 H 1.08001 * 119.99914 * 5.06697 * 11 10 9 13 13 C 1.38645 * 119.99650 * 185.06841 * 11 10 9 14 14 N 1.31565 * 120.00615 * 359.97438 * 13 11 10 15 15 Si 1.86800 * 119.99773 * 180.02562 * 13 11 10 16 16 H 1.48506 * 109.47246 * 60.00166 * 15 13 11 17 17 H 1.48505 * 109.47372 * 179.97438 * 15 13 11 18 18 H 1.48500 * 109.47433 * 299.99785 * 15 13 11 19 19 C 1.38973 * 119.85203 * 359.97438 * 9 8 7 20 20 Cl 1.73601 * 120.04651 * 180.02562 * 19 9 8 21 21 C 1.38226 * 119.90630 * 359.74996 * 19 9 8 22 22 H 1.08996 * 109.47134 * 60.00152 * 1 2 3 23 23 H 1.09006 * 109.46720 * 299.99900 * 1 2 3 24 24 H 1.09000 * 109.46772 * 180.02562 * 1 2 3 25 25 H 1.00899 * 111.00530 * 296.03919 * 4 2 1 26 26 H 1.00901 * 111.00406 * 59.99970 * 4 2 1 27 27 H 1.09001 * 109.47379 * 305.00459 * 5 2 1 28 28 H 1.09004 * 109.46962 * 65.00250 * 5 2 1 29 29 H 1.07991 * 119.95446 * 0.02562 * 7 6 5 30 30 H 1.08002 * 120.02360 * 180.02562 * 8 7 6 31 31 H 0.96998 * 120.00471 * 180.02562 * 14 13 11 32 32 H 1.07994 * 119.97408 * 180.27533 * 21 19 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 7 2.0196 -0.6925 -1.1994 5 6 2.0401 -0.7211 1.2492 6 6 3.5420 -0.6148 1.3127 7 6 4.1312 0.4508 1.9690 8 6 5.5072 0.5513 2.0296 9 6 6.3002 -0.4185 1.4304 10 8 7.6531 -0.3225 1.4889 11 6 8.1641 0.7963 2.0415 12 1 7.5059 1.5279 2.4864 13 6 9.5344 1.0074 2.0384 14 7 10.3362 0.1159 1.4968 15 14 10.2423 2.5570 2.8045 16 1 9.8742 2.6111 4.2422 17 1 11.7214 2.5430 2.6730 18 1 9.6942 3.7485 2.1080 19 6 5.7057 -1.4880 0.7717 20 17 6.6922 -2.7036 0.0214 21 6 4.3279 -1.5857 0.7196 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3633 0.5139 0.8901 24 1 -0.3633 -1.0277 0.0005 25 1 1.7503 -1.6648 -1.1909 26 1 1.6961 -0.2350 -2.0386 27 1 1.6054 -0.2616 2.1370 28 1 1.7517 -1.7714 1.2056 29 1 3.5143 1.2046 2.4352 30 1 5.9661 1.3835 2.5427 31 1 11.2949 0.2635 1.4950 32 1 3.8648 -2.4187 0.2118 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000043491836.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:25:32 Heat of formation + Delta-G solvation = -22.838469 kcal Electronic energy + Delta-G solvation = -16351.274517 eV Core-core repulsion = 13530.849603 eV Total energy + Delta-G solvation = -2820.424914 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -39.16278 -37.38107 -35.84192 -35.20752 -32.31920 -30.44460 -29.93061 -28.71227 -26.11010 -24.86852 -21.99766 -21.26620 -20.12840 -17.99653 -17.07711 -16.05765 -15.29922 -14.68957 -14.48986 -14.33941 -13.86932 -13.68208 -13.33545 -13.05445 -12.91308 -12.55477 -12.05789 -11.82707 -11.62743 -11.50561 -11.00394 -10.95444 -10.78056 -10.70407 -10.48772 -10.21462 -9.86467 -9.38868 -8.79937 -8.57258 -7.96195 -7.09185 -6.42600 -4.01481 2.10100 2.30666 3.14012 3.15624 3.18235 3.23433 3.97176 4.43540 4.59673 4.96096 5.06207 5.09055 5.22815 5.30155 5.46542 5.57066 5.75033 5.80610 5.88434 5.92973 5.99103 6.22472 6.26905 6.66490 6.72159 6.93363 7.14457 7.25207 7.30583 7.37059 7.51868 7.71913 7.98730 9.00975 9.68625 10.74133 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.026624 B = 0.005762 C = 0.004959 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1051.444615 B = 4858.045195 C = 5644.494314 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 C 0.090 3.910 3 H 0.080 0.920 4 N -0.835 5.835 5 C -0.055 4.055 6 C -0.159 4.159 7 C -0.068 4.068 8 C -0.227 4.227 9 C 0.156 3.844 10 O -0.160 6.160 11 C -0.395 4.395 12 H 0.092 0.908 13 C 0.042 3.958 14 N -0.855 5.855 15 Si 0.941 3.059 16 H -0.270 1.270 17 H -0.278 1.278 18 H -0.270 1.270 19 C -0.107 4.107 20 Cl -0.084 7.084 21 C -0.038 4.038 22 H 0.051 0.949 23 H 0.059 0.941 24 H 0.052 0.948 25 H 0.335 0.665 26 H 0.336 0.664 27 H 0.067 0.933 28 H 0.061 0.939 29 H 0.108 0.892 30 H 0.132 0.868 31 H 0.271 0.729 32 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.364 -0.176 -1.397 15.429 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.247 4.247 2 C -0.021 4.021 3 H 0.098 0.902 4 N -0.364 5.364 5 C -0.092 4.092 6 C -0.161 4.161 7 C -0.086 4.086 8 C -0.246 4.246 9 C 0.100 3.900 10 O -0.062 6.062 11 C -0.471 4.471 12 H 0.109 0.891 13 C -0.163 4.163 14 N -0.488 5.488 15 Si 0.765 3.235 16 H -0.195 1.195 17 H -0.203 1.203 18 H -0.195 1.195 19 C -0.135 4.135 20 Cl -0.056 7.056 21 C -0.057 4.057 22 H 0.070 0.930 23 H 0.078 0.922 24 H 0.071 0.929 25 H 0.148 0.852 26 H 0.148 0.852 27 H 0.085 0.915 28 H 0.079 0.921 29 H 0.126 0.874 30 H 0.149 0.851 31 H 0.081 0.919 32 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges -14.065 -0.281 -1.302 14.128 hybrid contribution -0.624 0.619 0.096 0.884 sum -14.689 0.338 -1.206 14.742 Atomic orbital electron populations 1.22693 0.98456 1.01642 1.01932 1.21490 0.90765 0.98918 0.90954 0.90184 1.58790 1.67585 1.06211 1.03767 1.20380 0.92546 0.99997 0.96321 1.18960 0.93922 0.97528 1.05660 1.20652 0.93997 0.96516 0.97456 1.21031 0.93450 1.02250 1.07897 1.19033 0.85666 0.92418 0.92841 1.84059 1.13471 1.39395 1.69294 1.21297 0.91373 0.97270 1.37173 0.89093 1.25285 0.95007 0.99000 0.97023 1.70052 1.04255 1.33893 1.40638 0.85795 0.78187 0.80178 0.79335 1.19506 1.20265 1.19491 1.19947 0.90882 0.94630 1.08052 1.98295 1.71196 1.54766 1.81313 1.20279 0.89936 0.98290 0.97221 0.93007 0.92221 0.92901 0.85229 0.85183 0.91488 0.92071 0.87385 0.85074 0.91926 0.86465 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.19 -1.62 9.48 37.16 0.35 -1.26 16 2 C 0.09 1.00 3.35 -67.71 -0.23 0.78 16 3 H 0.08 1.00 8.14 -51.93 -0.42 0.58 16 4 N -0.83 -9.40 8.64 -4.67 -0.04 -9.44 16 5 C -0.05 -0.68 4.96 -27.88 -0.14 -0.82 16 6 C -0.16 -2.66 4.95 -104.58 -0.52 -3.18 16 7 C -0.07 -1.21 9.69 -39.60 -0.38 -1.60 16 8 C -0.23 -4.90 9.17 -39.40 -0.36 -5.26 16 9 C 0.16 3.84 6.64 -39.08 -0.26 3.58 16 10 O -0.16 -4.59 9.22 0.00 0.00 -4.59 16 11 C -0.40 -11.05 9.49 30.88 0.29 -10.76 16 12 H 0.09 2.33 5.21 -52.49 -0.27 2.06 16 13 C 0.04 1.16 5.49 -17.52 -0.10 1.06 16 14 N -0.85 -25.21 13.67 55.48 0.76 -24.45 16 15 Si 0.94 20.51 29.55 -169.99 -5.02 15.49 16 16 H -0.27 -5.69 7.11 56.52 0.40 -5.28 16 17 H -0.28 -5.93 7.11 56.52 0.40 -5.53 16 18 H -0.27 -5.70 7.11 56.52 0.40 -5.30 16 19 C -0.11 -2.38 6.34 -39.31 -0.25 -2.63 16 20 Cl -0.08 -1.83 28.51 -51.86 -1.48 -3.31 16 21 C -0.04 -0.71 9.09 -39.57 -0.36 -1.07 16 22 H 0.05 0.41 8.14 -51.93 -0.42 -0.01 16 23 H 0.06 0.49 8.14 -51.93 -0.42 0.06 16 24 H 0.05 0.43 8.14 -51.93 -0.42 0.00 16 25 H 0.34 3.33 8.98 -39.29 -0.35 2.98 16 26 H 0.34 3.23 9.04 -39.29 -0.36 2.88 16 27 H 0.07 0.75 8.08 -51.93 -0.42 0.33 16 28 H 0.06 0.71 8.08 -51.93 -0.42 0.29 16 29 H 0.11 1.61 8.06 -52.49 -0.42 1.19 16 30 H 0.13 2.81 5.64 -52.49 -0.30 2.51 16 31 H 0.27 7.34 8.31 -40.82 -0.34 7.01 16 32 H 0.12 1.92 8.06 -52.49 -0.42 1.49 16 LS Contribution 291.60 15.07 4.39 4.39 Total: -1.00 -30.69 291.60 -7.12 -37.82 By element: Atomic # 1 Polarization: 9.04 SS G_CDS: -3.79 Total: 5.25 kcal Atomic # 6 Polarization: -19.20 SS G_CDS: -1.95 Total: -21.15 kcal Atomic # 7 Polarization: -34.61 SS G_CDS: 0.72 Total: -33.89 kcal Atomic # 8 Polarization: -4.59 SS G_CDS: 0.00 Total: -4.59 kcal Atomic # 14 Polarization: 20.51 SS G_CDS: -5.02 Total: 15.49 kcal Atomic # 17 Polarization: -1.83 SS G_CDS: -1.48 Total: -3.31 kcal Total LS contribution 4.39 Total: 4.39 kcal Total: -30.69 -7.12 -37.82 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000043491836.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.978 kcal (2) G-P(sol) polarization free energy of solvation -30.692 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.714 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.125 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.817 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.838 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds