Wall clock time and date at job start Mon Mar 30 2020 07:01:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53005 * 109.47183 * 2 1 4 4 N 1.46902 * 109.47157 * 240.00060 * 2 1 3 5 5 C 1.46896 * 110.99986 * 307.73601 * 4 2 1 6 6 C 1.50696 * 109.47097 * 302.01286 * 5 4 2 7 7 H 1.08000 * 120.00286 * 355.56420 * 6 5 4 8 8 C 1.37882 * 119.99814 * 175.56380 * 6 5 4 9 9 N 1.31514 * 119.99990 * 0.02562 * 8 6 5 10 10 Si 1.86801 * 119.99883 * 180.02562 * 8 6 5 11 11 H 1.48496 * 109.47393 * 359.97438 * 10 8 6 12 12 H 1.48497 * 109.47296 * 120.00203 * 10 8 6 13 13 H 1.48503 * 109.47020 * 239.99634 * 10 8 6 14 14 C 1.38605 * 111.00100 * 183.78465 * 4 2 1 15 15 N 1.32962 * 120.53798 * 20.30864 * 14 4 2 16 16 C 1.31763 * 120.70431 * 179.97438 * 15 14 4 17 17 N 1.31780 * 121.85416 * 0.02805 * 16 15 14 18 18 C 1.32557 * 121.01654 * 359.97206 * 17 16 15 19 19 C 1.38200 * 119.18685 * 359.74920 * 18 17 16 20 20 Cl 1.73603 * 120.84600 * 180.24966 * 19 18 17 21 21 H 1.08999 * 109.46963 * 66.46157 * 1 2 3 22 22 H 1.09005 * 109.46824 * 186.45801 * 1 2 3 23 23 H 1.08995 * 109.46797 * 306.45433 * 1 2 3 24 24 H 1.08999 * 109.47544 * 120.00385 * 2 1 3 25 25 H 1.08995 * 109.46988 * 54.22706 * 3 2 1 26 26 H 1.08994 * 109.47183 * 174.23183 * 3 2 1 27 27 H 1.09003 * 109.46758 * 294.23046 * 3 2 1 28 28 H 1.09000 * 109.46852 * 62.01685 * 5 4 2 29 29 H 1.09005 * 109.46888 * 182.01413 * 5 4 2 30 30 H 0.97001 * 119.99837 * 180.02562 * 9 8 6 31 31 H 1.07997 * 119.07476 * 179.97438 * 16 15 14 32 32 H 1.08000 * 120.40108 * 180.02562 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 2.0197 -0.6925 -1.1995 5 6 1.4038 -2.0198 -1.3293 6 6 1.7014 -2.8343 -0.0969 7 1 2.3481 -2.4358 0.6708 8 6 1.1479 -4.0886 0.0507 9 7 0.3608 -4.5741 -0.8843 10 14 1.5161 -5.0980 1.5788 11 1 2.4224 -4.3321 2.4715 12 1 0.2489 -5.3932 2.2943 13 1 2.1703 -6.3717 1.1848 14 6 3.4026 -0.7854 -1.1896 15 7 4.0798 -0.6639 -0.0518 16 6 5.3944 -0.7522 -0.0386 17 7 6.0884 -0.9618 -1.1390 18 6 5.4855 -1.0936 -2.3122 19 6 4.1072 -1.0141 -2.3743 20 17 3.2729 -1.1869 -3.8868 21 1 -0.3633 0.4104 -0.9422 22 1 -0.3633 -1.0212 0.1156 23 1 -0.3633 0.6106 0.8266 24 1 1.8934 -0.5139 0.8899 25 1 1.5948 1.9853 0.8338 26 1 3.1251 1.4443 0.1033 27 1 1.7635 1.9256 -0.9372 28 1 0.3251 -1.9104 -1.4410 29 1 1.8105 -2.5248 -2.2056 30 1 -0.0289 -5.4563 -0.7802 31 1 5.9179 -0.6491 0.9004 32 1 6.0641 -1.2655 -3.2078 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000097847475.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:01:05 Heat of formation + Delta-G solvation = 50.877917 kcal Electronic energy + Delta-G solvation = -17450.803946 eV Core-core repulsion = 14665.868366 eV Total energy + Delta-G solvation = -2784.935580 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.083 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -40.74588 -37.70379 -36.15716 -33.03250 -32.78720 -31.84436 -29.96702 -27.29330 -25.99796 -24.08231 -23.40669 -22.17114 -19.64859 -17.42926 -17.08151 -16.12747 -15.63254 -15.42770 -14.60233 -14.40738 -13.97127 -13.65070 -13.10947 -12.59202 -12.06213 -11.83238 -11.67083 -11.52873 -11.24075 -11.17146 -10.94007 -10.78477 -10.64788 -10.44941 -10.28157 -10.15869 -9.92211 -9.73408 -8.79558 -8.77519 -8.52250 -7.64292 -6.16079 -4.23699 1.22857 1.49888 2.51911 3.21275 3.30045 3.34995 4.02215 4.28893 4.33811 4.49321 4.64255 5.18052 5.23398 5.41587 5.65406 5.71396 5.75209 6.01836 6.21023 6.36012 6.37794 6.49020 6.58906 6.90371 6.94603 7.06331 7.23301 7.34994 7.65074 7.79945 7.96920 8.07085 8.49974 8.85405 9.43429 10.90577 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.017353 B = 0.009433 C = 0.008891 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1613.135759 B = 2967.727928 C = 3148.544728 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.089 3.911 3 C -0.144 4.144 4 N -0.478 5.478 5 C 0.191 3.809 6 C -0.554 4.554 7 H 0.069 0.931 8 C 0.069 3.931 9 N -0.887 5.887 10 Si 0.890 3.110 11 H -0.272 1.272 12 H -0.282 1.282 13 H -0.284 1.284 14 C 0.409 3.591 15 N -0.534 5.534 16 C 0.307 3.693 17 N -0.542 5.542 18 C 0.160 3.840 19 C -0.151 4.151 20 Cl -0.039 7.039 21 H 0.051 0.949 22 H 0.075 0.925 23 H 0.049 0.951 24 H 0.075 0.925 25 H 0.054 0.946 26 H 0.051 0.949 27 H 0.050 0.950 28 H 0.055 0.945 29 H 0.042 0.958 30 H 0.263 0.737 31 H 0.191 0.809 32 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.408 8.305 -1.466 10.019 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.200 4.200 2 C -0.018 4.018 3 C -0.201 4.201 4 N -0.197 5.197 5 C 0.069 3.931 6 C -0.593 4.593 7 H 0.087 0.913 8 C -0.134 4.134 9 N -0.525 5.525 10 Si 0.718 3.282 11 H -0.196 1.196 12 H -0.208 1.208 13 H -0.210 1.210 14 C 0.168 3.832 15 N -0.254 5.254 16 C 0.017 3.983 17 N -0.259 5.259 18 C -0.004 4.004 19 C -0.186 4.186 20 Cl -0.011 7.011 21 H 0.070 0.930 22 H 0.094 0.906 23 H 0.068 0.932 24 H 0.093 0.907 25 H 0.073 0.927 26 H 0.070 0.930 27 H 0.069 0.931 28 H 0.073 0.927 29 H 0.060 0.940 30 H 0.073 0.927 31 H 0.208 0.792 32 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 5.446 8.495 -1.214 10.164 hybrid contribution -0.146 -1.277 0.525 1.388 sum 5.300 7.218 -0.690 8.982 Atomic orbital electron populations 1.21855 0.94497 1.03126 1.00566 1.21403 0.95034 0.92900 0.92475 1.21891 1.00921 0.96374 1.00953 1.60044 0.99257 1.22694 1.37662 1.20071 0.95995 0.79301 0.97716 1.21824 1.30457 1.01434 1.05599 0.91263 1.24906 0.94638 0.97488 0.96377 1.69946 1.31414 1.17919 1.33206 0.86555 0.78280 0.80168 0.83228 1.19624 1.20772 1.20975 1.20032 0.92290 0.84389 0.86448 1.68746 1.10020 1.18719 1.27868 1.24733 0.86908 0.89961 0.96676 1.68444 1.40986 1.17600 0.98860 1.22904 0.89603 0.91212 0.96647 1.22314 0.94365 1.12343 0.89541 1.98347 1.78370 1.95978 1.28398 0.92991 0.90628 0.93244 0.90687 0.92721 0.93032 0.93077 0.92660 0.93995 0.92679 0.79197 0.81579 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.57 8.45 37.16 0.31 -2.26 16 2 C 0.09 1.71 1.83 -67.71 -0.12 1.59 16 3 C -0.14 -2.34 8.98 37.16 0.33 -2.01 16 4 N -0.48 -9.97 4.19 -166.77 -0.70 -10.66 16 5 C 0.19 4.64 4.32 -4.98 -0.02 4.62 16 6 C -0.55 -14.61 7.52 -34.44 -0.26 -14.87 16 7 H 0.07 1.87 5.97 -52.49 -0.31 1.55 16 8 C 0.07 1.88 5.46 -17.82 -0.10 1.79 16 9 N -0.89 -25.05 13.29 55.43 0.74 -24.31 16 10 Si 0.89 21.21 29.54 -169.99 -5.02 16.19 16 11 H -0.27 -6.47 7.11 56.52 0.40 -6.07 16 12 H -0.28 -6.62 7.11 56.52 0.40 -6.22 16 13 H -0.28 -6.78 7.11 56.52 0.40 -6.38 16 14 C 0.41 8.24 4.49 -154.70 -0.69 7.55 16 15 N -0.53 -10.28 7.07 -13.78 -0.10 -10.38 16 16 C 0.31 5.11 12.28 -92.19 -1.13 3.97 16 17 N -0.54 -8.98 10.43 -14.64 -0.15 -9.13 16 18 C 0.16 2.59 11.11 -17.25 -0.19 2.40 16 19 C -0.15 -2.77 6.19 -39.04 -0.24 -3.02 16 20 Cl -0.04 -0.68 27.11 -51.86 -1.41 -2.09 16 21 H 0.05 0.89 8.14 -51.93 -0.42 0.47 16 22 H 0.07 1.56 6.51 -51.93 -0.34 1.22 16 23 H 0.05 0.76 8.14 -51.93 -0.42 0.34 16 24 H 0.08 1.61 6.08 -51.93 -0.32 1.30 16 25 H 0.05 0.78 8.14 -51.93 -0.42 0.35 16 26 H 0.05 0.86 6.55 -51.93 -0.34 0.52 16 27 H 0.05 0.81 8.14 -51.93 -0.42 0.39 16 28 H 0.06 1.42 6.47 -51.93 -0.34 1.08 16 29 H 0.04 1.09 6.58 -51.93 -0.34 0.75 16 30 H 0.26 7.08 8.31 -40.82 -0.34 6.74 16 31 H 0.19 2.45 8.06 -52.49 -0.42 2.03 16 32 H 0.17 2.11 8.06 -52.49 -0.42 1.69 16 LS Contribution 278.71 15.07 4.20 4.20 Total: -1.00 -28.46 278.71 -8.21 -36.66 By element: Atomic # 1 Polarization: 3.43 SS G_CDS: -3.66 Total: -0.23 kcal Atomic # 6 Polarization: 1.87 SS G_CDS: -2.11 Total: -0.24 kcal Atomic # 7 Polarization: -54.28 SS G_CDS: -0.21 Total: -54.49 kcal Atomic # 14 Polarization: 21.21 SS G_CDS: -5.02 Total: 16.19 kcal Atomic # 17 Polarization: -0.68 SS G_CDS: -1.41 Total: -2.09 kcal Total LS contribution 4.20 Total: 4.20 kcal Total: -28.46 -8.21 -36.66 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000097847475.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 87.543 kcal (2) G-P(sol) polarization free energy of solvation -28.456 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 59.087 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.209 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.665 kcal (6) G-S(sol) free energy of system = (1) + (5) 50.878 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds