Wall clock time and date at job start Mon Mar 30 2020 06:25:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 H 1.08994 * 109.47229 * 2 1 4 4 N 1.46901 * 109.47016 * 239.99748 * 2 1 3 5 5 C 1.52998 * 109.46952 * 120.00318 * 2 1 3 6 6 C 1.50704 * 109.46845 * 185.00163 * 5 2 1 7 7 C 1.38235 * 120.04570 * 89.99979 * 6 5 2 8 8 Cl 1.73603 * 119.97757 * 359.94977 * 7 6 5 9 9 C 1.38395 * 120.04478 * 179.97438 * 7 6 5 10 10 C 1.38307 * 120.12264 * 359.97438 * 9 7 6 11 11 C 1.38077 * 120.08437 * 0.04106 * 10 9 7 12 12 C 1.38835 * 120.03679 * 269.71662 * 6 5 2 13 13 O 1.35751 * 120.06421 * 0.02606 * 12 6 5 14 14 C 1.34832 * 116.99941 * 174.15029 * 13 12 6 15 15 H 1.07996 * 120.00376 * 5.06548 * 14 13 12 16 16 C 1.38653 * 119.99742 * 185.06295 * 14 13 12 17 17 N 1.31564 * 120.00069 * 0.02562 * 16 14 13 18 18 Si 1.86803 * 120.00035 * 180.02562 * 16 14 13 19 19 H 1.48498 * 109.46952 * 59.99806 * 18 16 14 20 20 H 1.48500 * 109.47424 * 179.97438 * 18 16 14 21 21 H 1.48494 * 109.47130 * 300.00361 * 18 16 14 22 22 H 1.08994 * 109.47229 * 179.97438 * 1 2 3 23 23 H 1.08998 * 109.46971 * 300.00185 * 1 2 3 24 24 H 1.08995 * 109.46880 * 59.99799 * 1 2 3 25 25 H 1.00904 * 111.00018 * 60.00460 * 4 2 1 26 26 H 1.00899 * 110.99989 * 183.95191 * 4 2 1 27 27 H 1.08999 * 109.47365 * 64.99936 * 5 2 1 28 28 H 1.09003 * 109.47025 * 304.99518 * 5 2 1 29 29 H 1.08000 * 119.93763 * 179.97438 * 9 7 6 30 30 H 1.08003 * 119.95408 * 180.02562 * 10 9 7 31 31 H 1.07995 * 120.02064 * 180.02562 * 11 10 9 32 32 H 0.97002 * 119.99551 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 7 2.0197 -0.6926 -1.1994 5 6 2.0400 -0.7213 1.2492 6 6 3.5419 -0.6149 1.3127 7 6 4.1334 0.4489 1.9680 8 17 3.1453 1.6638 2.7173 9 6 5.5126 0.5463 2.0268 10 6 6.3027 -0.4200 1.4309 11 6 5.7174 -1.4846 0.7747 12 6 4.3333 -1.5884 0.7181 13 8 3.7557 -2.6371 0.0782 14 6 4.5767 -3.4800 -0.5802 15 1 5.6471 -3.3525 -0.5146 16 6 4.0466 -4.5105 -1.3414 17 7 2.7426 -4.6656 -1.4217 18 14 5.1840 -5.6788 -2.2530 19 1 6.0676 -6.3695 -1.2797 20 1 4.3753 -6.6849 -2.9872 21 1 6.0134 -4.9111 -3.2163 22 1 -0.3633 -1.0276 -0.0005 23 1 -0.3633 0.5139 0.8900 24 1 -0.3633 0.5138 -0.8899 25 1 1.6962 -0.2350 -2.0386 26 1 3.0262 -0.7626 -1.1909 27 1 1.7516 -1.7716 1.2055 28 1 1.6054 -0.2618 2.1370 29 1 5.9729 1.3783 2.5389 30 1 7.3788 -0.3415 1.4787 31 1 6.3353 -2.2387 0.3101 32 1 2.3719 -5.3864 -1.9546 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000128553297.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:25:40 Heat of formation + Delta-G solvation = -19.315626 kcal Electronic energy + Delta-G solvation = -17099.123181 eV Core-core repulsion = 14278.851029 eV Total energy + Delta-G solvation = -2820.272152 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -39.40487 -36.88570 -35.76912 -35.54992 -32.31469 -31.00089 -28.91107 -28.52259 -25.87538 -25.30242 -21.71286 -21.19796 -19.57782 -18.05290 -16.92216 -15.48813 -15.13493 -15.00015 -14.66935 -14.34146 -14.00359 -13.47874 -13.27460 -12.86340 -12.47400 -12.04507 -11.77714 -11.54952 -11.35445 -11.25203 -11.11588 -10.99563 -10.69298 -10.51648 -10.45966 -10.41533 -10.22826 -9.34437 -8.84220 -8.04258 -7.73463 -7.27675 -6.42996 -4.02114 1.90797 2.19643 2.64784 3.12723 3.13377 3.16042 3.95425 4.37148 5.07204 5.17957 5.27083 5.36729 5.58976 5.63843 5.79096 5.89676 5.94987 6.15122 6.21875 6.35077 6.38696 6.49669 6.51348 6.72190 6.91015 6.95953 7.10013 7.22557 7.33186 7.60431 7.95432 8.00701 8.29790 8.99100 9.66251 10.71049 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.023075 B = 0.007904 C = 0.006166 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1213.128513 B = 3541.848805 C = 4539.684973 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C 0.101 3.899 3 H 0.021 0.979 4 N -0.824 5.824 5 C -0.061 4.061 6 C -0.156 4.156 7 C 0.016 3.984 8 Cl -0.093 7.093 9 C -0.213 4.213 10 C -0.064 4.064 11 C -0.237 4.237 12 C 0.161 3.839 13 O -0.141 6.141 14 C -0.399 4.399 15 H 0.089 0.911 16 C 0.048 3.952 17 N -0.836 5.836 18 Si 0.936 3.064 19 H -0.271 1.271 20 H -0.278 1.278 21 H -0.271 1.271 22 H 0.065 0.935 23 H 0.051 0.949 24 H 0.046 0.954 25 H 0.323 0.677 26 H 0.348 0.652 27 H 0.087 0.913 28 H 0.065 0.935 29 H 0.114 0.886 30 H 0.115 0.885 31 H 0.131 0.869 32 H 0.270 0.730 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.280 7.959 2.896 8.566 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C -0.010 4.010 3 H 0.039 0.961 4 N -0.356 5.356 5 C -0.098 4.098 6 C -0.159 4.159 7 C -0.011 4.011 8 Cl -0.064 7.064 9 C -0.233 4.233 10 C -0.083 4.083 11 C -0.256 4.256 12 C 0.105 3.895 13 O -0.042 6.042 14 C -0.475 4.475 15 H 0.107 0.893 16 C -0.159 4.159 17 N -0.468 5.468 18 Si 0.760 3.240 19 H -0.197 1.197 20 H -0.203 1.203 21 H -0.196 1.196 22 H 0.084 0.916 23 H 0.070 0.930 24 H 0.065 0.935 25 H 0.134 0.866 26 H 0.163 0.837 27 H 0.105 0.895 28 H 0.084 0.916 29 H 0.132 0.868 30 H 0.133 0.867 31 H 0.149 0.851 32 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges 0.340 7.171 3.088 7.815 hybrid contribution 1.227 0.447 -0.573 1.426 sum 1.566 7.618 2.515 8.174 Atomic orbital electron populations 1.21791 0.95393 1.02398 1.00348 1.21150 0.94353 0.94070 0.91473 0.96085 1.58620 1.17547 1.57061 1.02325 1.20394 0.90188 1.02734 0.96506 1.18710 0.95924 0.95092 1.06132 1.20313 0.90782 0.90874 0.99132 1.98292 1.71382 1.55430 1.81319 1.20397 0.91144 1.02594 1.09127 1.20650 0.98516 0.93349 0.95751 1.21246 0.94857 1.01728 1.07782 1.18924 0.90454 0.87884 0.92227 1.84079 1.34625 1.29641 1.55897 1.21255 0.89840 1.08553 1.27817 0.89338 1.25232 0.96459 0.97484 0.96761 1.70079 1.10220 1.29969 1.36568 0.85875 0.79208 0.79485 0.79391 1.19653 1.20325 1.19600 0.91637 0.93034 0.93506 0.86550 0.83691 0.89463 0.91620 0.86810 0.86749 0.85097 0.92042 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.22 9.49 37.16 0.35 -1.87 16 2 C 0.10 1.82 3.42 -67.71 -0.23 1.59 16 3 H 0.02 0.38 8.14 -51.93 -0.42 -0.05 16 4 N -0.82 -16.43 8.84 -4.67 -0.04 -16.48 16 5 C -0.06 -1.18 4.41 -27.88 -0.12 -1.31 16 6 C -0.16 -3.21 4.73 -104.40 -0.49 -3.70 16 7 C 0.02 0.29 6.31 -39.52 -0.25 0.04 16 8 Cl -0.09 -1.49 27.29 -51.86 -1.42 -2.90 16 9 C -0.21 -3.72 9.83 -39.50 -0.39 -4.11 16 10 C -0.06 -1.13 10.04 -39.62 -0.40 -1.53 16 11 C -0.24 -4.87 9.17 -39.39 -0.36 -5.23 16 12 C 0.16 3.65 5.49 -39.11 -0.21 3.43 16 13 O -0.14 -3.67 7.62 0.04 0.00 -3.67 16 14 C -0.40 -10.41 9.49 30.89 0.29 -10.12 16 15 H 0.09 2.15 5.20 -52.49 -0.27 1.88 16 16 C 0.05 1.24 5.49 -17.51 -0.10 1.15 16 17 N -0.84 -23.27 13.67 55.48 0.76 -22.51 16 18 Si 0.94 19.75 29.55 -169.99 -5.02 14.73 16 19 H -0.27 -5.60 7.11 56.52 0.40 -5.20 16 20 H -0.28 -5.81 7.11 56.52 0.40 -5.40 16 21 H -0.27 -5.57 7.11 56.52 0.40 -5.17 16 22 H 0.06 1.11 8.14 -51.93 -0.42 0.69 16 23 H 0.05 0.71 8.14 -51.93 -0.42 0.29 16 24 H 0.05 0.66 8.14 -51.93 -0.42 0.24 16 25 H 0.32 5.65 9.04 -39.29 -0.36 5.29 16 26 H 0.35 7.57 6.37 -39.29 -0.25 7.32 16 27 H 0.09 1.97 7.53 -51.93 -0.39 1.57 16 28 H 0.07 1.17 6.90 -51.93 -0.36 0.81 16 29 H 0.11 1.73 8.06 -52.49 -0.42 1.30 16 30 H 0.11 1.67 8.06 -52.48 -0.42 1.24 16 31 H 0.13 2.67 5.64 -52.49 -0.30 2.37 16 32 H 0.27 7.01 8.31 -40.82 -0.34 6.67 16 LS Contribution 283.84 15.07 4.28 4.28 Total: -1.00 -27.40 283.84 -6.95 -34.35 By element: Atomic # 1 Polarization: 17.45 SS G_CDS: -3.60 Total: 13.86 kcal Atomic # 6 Polarization: -19.74 SS G_CDS: -1.91 Total: -21.65 kcal Atomic # 7 Polarization: -39.70 SS G_CDS: 0.72 Total: -38.98 kcal Atomic # 8 Polarization: -3.67 SS G_CDS: 0.00 Total: -3.67 kcal Atomic # 14 Polarization: 19.75 SS G_CDS: -5.02 Total: 14.73 kcal Atomic # 17 Polarization: -1.49 SS G_CDS: -1.42 Total: -2.90 kcal Total LS contribution 4.28 Total: 4.28 kcal Total: -27.40 -6.95 -34.35 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000128553297.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.035 kcal (2) G-P(sol) polarization free energy of solvation -27.401 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.366 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.949 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.351 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.316 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds