Wall clock time and date at job start Mon Mar 30 2020 06:46:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46895 * 1 3 3 C 1.46896 * 111.00550 * 2 1 4 4 H 1.08994 * 109.47490 * 184.14741 * 3 2 1 5 5 C 1.50705 * 109.46725 * 64.14470 * 3 2 1 6 6 H 1.08001 * 120.00071 * 244.12212 * 5 3 2 7 7 C 1.37874 * 119.99970 * 64.12913 * 5 3 2 8 8 N 1.31521 * 120.00002 * 359.97438 * 7 5 3 9 9 Si 1.86798 * 120.00196 * 179.97438 * 7 5 3 10 10 H 1.48500 * 109.47294 * 89.99722 * 9 7 5 11 11 H 1.48503 * 109.47155 * 209.99901 * 9 7 5 12 12 H 1.48505 * 109.47032 * 329.99399 * 9 7 5 13 13 C 1.50699 * 109.47175 * 304.15106 * 3 2 1 14 14 C 1.38265 * 119.95263 * 101.63401 * 13 3 2 15 15 C 1.38127 * 120.07123 * 179.97438 * 14 13 3 16 16 C 1.38771 * 119.96705 * 0.02562 * 15 14 13 17 17 O 1.35902 * 120.04624 * 179.97438 * 16 15 14 18 18 C 1.42902 * 116.99713 * 179.97438 * 17 16 15 19 19 C 1.38688 * 119.90287 * 359.97438 * 16 15 14 20 20 C 1.38285 * 119.92958 * 359.75405 * 19 16 15 21 21 Cl 1.73601 * 119.98358 * 180.24993 * 20 19 16 22 22 H 1.09004 * 109.46715 * 295.59096 * 1 2 3 23 23 H 1.09002 * 109.47472 * 55.58929 * 1 2 3 24 24 H 1.09000 * 109.47708 * 175.59274 * 1 2 3 25 25 H 1.00906 * 110.99598 * 236.04701 * 2 1 3 26 26 H 0.97001 * 120.00263 * 179.97438 * 8 7 5 27 27 H 1.08001 * 119.96706 * 359.96063 * 14 13 3 28 28 H 1.07992 * 120.02015 * 179.97438 * 15 14 13 29 29 H 1.09001 * 109.46815 * 299.99528 * 18 17 16 30 30 H 1.09000 * 109.47333 * 59.99743 * 18 17 16 31 31 H 1.09002 * 109.47042 * 180.02562 * 18 17 16 32 32 H 1.07995 * 120.03024 * 180.02562 * 19 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4689 0.0000 0.0000 3 6 1.9955 1.3713 0.0000 4 1 3.0825 1.3432 -0.0743 5 6 1.5971 2.0623 1.2787 6 1 0.9407 2.9194 1.2474 7 6 2.0706 1.6004 2.4883 8 7 2.8696 0.5564 2.5264 9 14 1.5774 2.4573 4.0732 10 1 0.3364 1.8388 4.6049 11 1 2.6675 2.3169 5.0718 12 1 1.3362 3.8975 3.8029 13 6 1.4310 2.1262 -1.1758 14 6 0.3897 3.0165 -0.9891 15 6 -0.1292 3.7101 -2.0650 16 6 0.3946 3.5128 -3.3347 17 8 -0.1151 4.1940 -4.3945 18 6 0.4735 3.9412 -5.6719 19 6 1.4391 2.6195 -3.5207 20 6 1.9592 1.9315 -2.4397 21 17 3.2709 0.8178 -2.6698 22 1 -0.3633 0.4439 0.9269 23 1 -0.3634 0.5808 -0.8478 24 1 -0.3634 -1.0246 -0.0790 25 1 1.8305 -0.5262 -0.7814 26 1 3.2031 0.2317 3.3774 27 1 -0.0185 3.1697 -0.0010 28 1 -0.9428 4.4050 -1.9182 29 1 1.5326 4.1974 -5.6410 30 1 0.3621 2.8859 -5.9210 31 1 -0.0247 4.5480 -6.4280 32 1 1.8486 2.4646 -4.5079 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259591518.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:46:46 Heat of formation + Delta-G solvation = -8.756827 kcal Electronic energy + Delta-G solvation = -16968.304295 eV Core-core repulsion = 14148.490007 eV Total energy + Delta-G solvation = -2819.814288 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -39.91669 -37.85950 -35.90488 -34.85016 -31.90690 -30.51455 -29.89404 -27.49715 -26.21306 -24.47159 -22.35327 -21.96119 -19.90343 -18.02759 -16.56305 -15.71913 -15.63945 -15.18869 -14.62238 -14.55672 -14.03966 -13.65682 -13.38610 -13.25946 -12.49855 -12.11006 -11.98652 -11.84626 -11.63873 -10.96247 -10.86864 -10.74244 -10.69917 -10.56723 -10.32465 -10.19092 -9.72856 -8.97207 -8.43631 -8.39332 -7.66450 -6.89076 -5.89224 -4.01468 1.59010 1.82147 2.60477 3.33688 3.41060 3.41307 3.42562 4.10800 4.46921 5.02217 5.11712 5.12832 5.35903 5.40676 5.42224 5.64904 5.74092 5.97447 6.10347 6.18588 6.43736 6.46896 6.56849 6.80052 6.93861 7.07332 7.13550 7.56555 7.58453 7.88281 8.17284 8.53742 8.86384 9.12875 9.66176 11.17175 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.025646 B = 0.007263 C = 0.006280 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1091.533868 B = 3854.067808 C = 4457.483982 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.043 3.957 2 N -0.647 5.647 3 C 0.251 3.749 4 H 0.060 0.940 5 C -0.534 4.534 6 H 0.061 0.939 7 C 0.085 3.915 8 N -0.848 5.848 9 Si 0.881 3.119 10 H -0.281 1.281 11 H -0.287 1.287 12 H -0.275 1.275 13 C -0.102 4.102 14 C -0.053 4.053 15 C -0.155 4.155 16 C 0.113 3.887 17 O -0.319 6.319 18 C 0.028 3.972 19 C -0.208 4.208 20 C -0.008 4.008 21 Cl -0.073 7.073 22 H 0.068 0.932 23 H 0.000 1.000 24 H 0.034 0.966 25 H 0.302 0.698 26 H 0.257 0.743 27 H 0.152 0.848 28 H 0.127 0.873 29 H 0.053 0.947 30 H 0.053 0.947 31 H 0.095 0.905 32 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.619 3.651 -12.533 13.546 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.107 4.107 2 N -0.274 5.274 3 C 0.144 3.856 4 H 0.077 0.923 5 C -0.572 4.572 6 H 0.079 0.921 7 C -0.121 4.121 8 N -0.483 5.483 9 Si 0.709 3.291 10 H -0.207 1.207 11 H -0.213 1.213 12 H -0.200 1.200 13 C -0.105 4.105 14 C -0.071 4.071 15 C -0.174 4.174 16 C 0.068 3.932 17 O -0.233 6.233 18 C -0.067 4.067 19 C -0.227 4.227 20 C -0.036 4.036 21 Cl -0.044 7.044 22 H 0.086 0.914 23 H 0.018 0.982 24 H 0.053 0.947 25 H 0.118 0.882 26 H 0.066 0.934 27 H 0.169 0.831 28 H 0.145 0.855 29 H 0.072 0.928 30 H 0.071 0.929 31 H 0.114 0.886 32 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -3.473 3.454 -11.737 12.718 hybrid contribution -0.149 0.458 -0.318 0.577 sum -3.621 3.912 -12.055 13.182 Atomic orbital electron populations 1.21962 0.90635 0.98049 1.00022 1.60974 1.05421 1.15084 1.45904 1.18326 0.95672 0.83414 0.88190 0.92255 1.20973 1.31915 1.13934 0.90424 0.92121 1.24911 0.94438 0.94299 0.98501 1.70067 1.30766 1.22411 1.25070 0.86804 0.78254 0.80029 0.84048 1.20733 1.21311 1.19977 1.21464 0.95831 0.97815 0.95405 1.21351 0.94275 0.92734 0.98759 1.20622 1.03024 1.03842 0.89898 1.18752 0.93782 0.93000 0.87667 1.86046 1.58763 1.63253 1.15286 1.22986 0.98845 1.01661 0.83204 1.20891 1.00799 1.02118 0.98901 1.20696 0.92716 0.95603 0.94559 1.98339 1.47617 1.61319 1.97098 0.91372 0.98211 0.94685 0.88188 0.93352 0.83064 0.85514 0.92830 0.92882 0.88614 0.85476 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.92 9.97 60.06 0.60 1.52 16 2 N -0.65 -15.19 6.34 -116.50 -0.74 -15.93 16 3 C 0.25 6.06 1.96 -70.02 -0.14 5.92 16 4 H 0.06 1.60 7.41 -51.93 -0.38 1.21 16 5 C -0.53 -13.88 7.03 -34.44 -0.24 -14.12 16 6 H 0.06 1.52 5.29 -52.49 -0.28 1.24 16 7 C 0.09 2.30 5.41 -17.82 -0.10 2.21 16 8 N -0.85 -24.15 12.95 55.43 0.72 -23.43 16 9 Si 0.88 20.71 29.54 -169.99 -5.02 15.69 16 10 H -0.28 -6.61 7.11 56.52 0.40 -6.20 16 11 H -0.29 -6.80 7.11 56.52 0.40 -6.39 16 12 H -0.27 -6.35 7.11 56.52 0.40 -5.95 16 13 C -0.10 -2.12 4.00 -104.57 -0.42 -2.54 16 14 C -0.05 -1.01 8.07 -39.61 -0.32 -1.33 16 15 C -0.16 -2.63 9.99 -39.43 -0.39 -3.02 16 16 C 0.11 1.85 6.69 -39.22 -0.26 1.59 16 17 O -0.32 -4.61 10.50 -19.43 -0.20 -4.82 16 18 C 0.03 0.29 9.81 101.05 0.99 1.28 16 19 C -0.21 -3.41 8.82 -39.40 -0.35 -3.76 16 20 C -0.01 -0.16 6.31 -39.52 -0.25 -0.41 16 21 Cl -0.07 -1.29 26.64 -51.86 -1.38 -2.67 16 22 H 0.07 1.55 7.37 -51.93 -0.38 1.16 16 23 H 0.00 -0.01 6.23 -51.93 -0.32 -0.33 16 24 H 0.03 0.67 8.14 -51.93 -0.42 0.25 16 25 H 0.30 6.67 7.96 -39.29 -0.31 6.36 16 26 H 0.26 7.02 8.31 -40.82 -0.34 6.68 16 27 H 0.15 2.97 5.68 -52.49 -0.30 2.67 16 28 H 0.13 1.87 8.06 -52.49 -0.42 1.45 16 29 H 0.05 0.51 7.66 -51.93 -0.40 0.11 16 30 H 0.05 0.50 7.66 -51.93 -0.40 0.10 16 31 H 0.10 0.71 8.14 -51.93 -0.42 0.29 16 32 H 0.13 1.77 6.30 -52.49 -0.33 1.44 16 LS Contribution 279.57 15.07 4.21 4.21 Total: -1.00 -28.75 279.57 -6.80 -35.55 By element: Atomic # 1 Polarization: 7.59 SS G_CDS: -3.51 Total: 4.08 kcal Atomic # 6 Polarization: -11.80 SS G_CDS: -0.88 Total: -12.67 kcal Atomic # 7 Polarization: -39.34 SS G_CDS: -0.02 Total: -39.36 kcal Atomic # 8 Polarization: -4.61 SS G_CDS: -0.20 Total: -4.82 kcal Atomic # 14 Polarization: 20.71 SS G_CDS: -5.02 Total: 15.69 kcal Atomic # 17 Polarization: -1.29 SS G_CDS: -1.38 Total: -2.67 kcal Total LS contribution 4.21 Total: 4.21 kcal Total: -28.75 -6.80 -35.55 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259591518.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.792 kcal (2) G-P(sol) polarization free energy of solvation -28.750 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.958 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.799 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.549 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.757 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds