Wall clock time and date at job start Mon Mar 30 2020 07:11:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 O 1.21275 * 119.99408 * 2 1 4 4 N 1.34773 * 120.00106 * 179.97438 * 2 1 3 5 5 C 1.46492 * 119.99923 * 179.97438 * 4 2 1 6 6 H 1.08998 * 109.47478 * 35.00035 * 5 4 2 7 7 C 1.50703 * 109.47393 * 275.00333 * 5 4 2 8 8 H 1.07995 * 120.00100 * 120.00029 * 7 5 4 9 9 C 1.37884 * 119.99823 * 300.00097 * 7 5 4 10 10 N 1.31518 * 119.99999 * 0.02562 * 9 7 5 11 11 Si 1.86799 * 119.99830 * 179.97438 * 9 7 5 12 12 H 1.48494 * 109.47143 * 90.00252 * 11 9 7 13 13 H 1.48507 * 109.46801 * 210.00138 * 11 9 7 14 14 H 1.48499 * 109.47373 * 329.99905 * 11 9 7 15 15 C 1.50707 * 109.47017 * 155.00351 * 5 4 2 16 16 C 1.38209 * 120.00120 * 25.23881 * 15 5 4 17 17 C 1.38417 * 119.99787 * 180.29260 * 16 15 5 18 18 F 1.35104 * 119.99973 * 179.70090 * 17 16 15 19 19 C 1.38475 * 120.00521 * 359.72633 * 17 16 15 20 20 C 1.38165 * 119.99479 * 0.02562 * 19 17 16 21 21 C 1.38430 * 119.99883 * 204.99989 * 15 5 4 22 22 F 1.35104 * 119.99956 * 359.97438 * 21 15 5 23 23 H 1.09011 * 109.47008 * 240.00187 * 1 2 3 24 24 H 1.09000 * 109.47144 * 0.02562 * 1 2 3 25 25 H 1.08997 * 109.47416 * 120.00290 * 1 2 3 26 26 H 0.96999 * 119.99684 * 0.02562 * 4 2 1 27 27 H 0.96999 * 119.99553 * 180.02562 * 10 9 7 28 28 H 1.07999 * 119.99955 * 359.97438 * 16 15 5 29 29 H 1.07991 * 120.00557 * 179.97438 * 19 17 16 30 30 H 1.08000 * 119.99806 * 179.97438 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 8 2.1133 1.0503 0.0000 4 7 2.1809 -1.1672 0.0005 5 6 3.6459 -1.1671 0.0000 6 1 4.0095 -0.3249 0.5887 7 6 4.1477 -1.0441 -1.4157 8 1 4.7685 -0.2066 -1.6977 9 6 3.8143 -2.0009 -2.3509 10 7 3.0579 -3.0206 -2.0076 11 14 4.4358 -1.8481 -4.1059 12 1 5.7440 -2.5397 -4.2297 13 1 3.4571 -2.4704 -5.0334 14 1 4.6001 -0.4128 -4.4496 15 6 4.1485 -2.4545 0.6010 16 6 3.3581 -3.5878 0.5674 17 6 3.8173 -4.7686 1.1248 18 9 3.0423 -5.8749 1.0973 19 6 5.0709 -4.8160 1.7112 20 6 5.8630 -3.6844 1.7403 21 6 5.4038 -2.5032 1.1825 22 9 6.1786 -1.3967 1.2106 23 1 -0.3633 -0.5139 0.8901 24 1 -0.3633 1.0277 -0.0005 25 1 -0.3634 -0.5139 -0.8899 26 1 1.6959 -2.0072 0.0005 27 1 2.8237 -3.6938 -2.6654 28 1 2.3801 -3.5507 0.1107 29 1 5.4290 -5.7371 2.1465 30 1 6.8406 -3.7211 2.1980 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259765130.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:11:18 Heat of formation + Delta-G solvation = -104.831183 kcal Electronic energy + Delta-G solvation = -19126.852070 eV Core-core repulsion = 15751.075005 eV Total energy + Delta-G solvation = -3375.777065 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 255.081 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -48.26735 -48.08996 -38.86345 -37.76271 -34.65292 -32.08351 -30.70092 -29.49684 -28.81026 -26.69029 -23.52554 -22.21525 -20.82695 -19.43421 -17.15627 -16.88148 -16.46403 -16.39379 -15.47809 -15.17243 -14.82744 -14.57333 -14.52367 -14.12638 -13.72947 -13.32629 -12.82495 -12.75900 -12.58810 -12.06565 -11.82773 -11.66684 -11.54392 -11.24575 -11.04028 -10.82898 -10.38830 -10.03019 -9.82877 -9.05230 -8.76339 -8.19493 -7.91064 -7.60144 -6.26982 -4.41237 1.73310 1.87638 3.17918 3.25430 3.31547 3.68021 4.15867 4.25091 4.39076 4.86848 4.96353 5.07589 5.34814 5.48005 5.62805 5.81355 5.89143 5.95754 6.00132 6.31933 6.41237 6.63674 6.71161 6.77912 6.91613 7.20602 7.56818 7.63293 7.78040 7.91973 8.56274 8.78653 9.28734 9.37860 10.70000 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.014885 B = 0.010226 C = 0.008783 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1880.644591 B = 2737.591722 C = 3187.037012 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C 0.503 3.497 3 O -0.568 6.568 4 N -0.696 5.696 5 C 0.295 3.705 6 H 0.063 0.937 7 C -0.509 4.509 8 H 0.069 0.931 9 C 0.075 3.925 10 N -0.881 5.881 11 Si 0.901 3.099 12 H -0.278 1.278 13 H -0.284 1.284 14 H -0.271 1.271 15 C -0.045 4.045 16 C -0.070 4.070 17 C 0.067 3.933 18 F -0.149 7.149 19 C -0.153 4.153 20 C -0.144 4.144 21 C 0.085 3.915 22 F -0.139 7.139 23 H 0.076 0.924 24 H 0.080 0.920 25 H 0.080 0.920 26 H 0.391 0.609 27 H 0.267 0.733 28 H 0.152 0.848 29 H 0.128 0.872 30 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.651 -4.105 5.705 7.220 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.232 4.232 2 C 0.288 3.712 3 O -0.449 6.449 4 N -0.346 5.346 5 C 0.193 3.807 6 H 0.081 0.919 7 C -0.547 4.547 8 H 0.087 0.913 9 C -0.130 4.130 10 N -0.518 5.518 11 Si 0.728 3.272 12 H -0.204 1.204 13 H -0.210 1.210 14 H -0.196 1.196 15 C -0.048 4.048 16 C -0.090 4.090 17 C 0.048 3.952 18 F -0.128 7.128 19 C -0.172 4.172 20 C -0.163 4.163 21 C 0.066 3.934 22 F -0.117 7.117 23 H 0.094 0.906 24 H 0.099 0.901 25 H 0.099 0.901 26 H 0.227 0.773 27 H 0.077 0.923 28 H 0.169 0.831 29 H 0.146 0.854 30 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -1.297 -3.525 5.616 6.756 hybrid contribution 0.155 -0.716 -1.273 1.469 sum -1.142 -4.241 4.342 6.176 Atomic orbital electron populations 1.21900 0.94031 1.04029 1.03277 1.20401 0.89586 0.84314 0.76868 1.90617 1.70832 1.31711 1.51724 1.46568 1.08620 1.07463 1.71903 1.17446 0.78071 0.89454 0.95713 0.91903 1.21379 1.31856 1.08739 0.92686 0.91330 1.25008 0.94191 0.94365 0.99395 1.69741 1.35858 1.11551 1.34659 0.86432 0.78661 0.78677 0.83447 1.20411 1.20979 1.19579 1.20248 0.92428 0.98859 0.93235 1.20885 1.02625 0.89646 0.95876 1.17754 0.90489 0.83712 1.03272 1.91426 1.74645 1.51647 1.95100 1.20625 0.93649 0.99001 1.03918 1.20657 1.00731 0.91487 1.03474 1.17454 0.90279 0.83311 1.02404 1.91448 1.74075 1.51440 1.94777 0.90552 0.90132 0.90149 0.77339 0.92287 0.83059 0.85396 0.85133 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.63 10.32 36.01 0.37 -2.26 16 2 C 0.50 10.71 7.90 -10.98 -0.09 10.62 16 3 O -0.57 -14.47 16.75 5.56 0.09 -14.38 16 4 N -0.70 -15.01 4.40 -56.07 -0.25 -15.26 16 5 C 0.30 7.08 2.18 -70.23 -0.15 6.93 16 6 H 0.06 1.61 7.22 -51.93 -0.38 1.23 16 7 C -0.51 -13.43 8.86 -34.44 -0.31 -13.74 16 8 H 0.07 1.90 7.81 -52.49 -0.41 1.49 16 9 C 0.07 1.89 5.23 -17.82 -0.09 1.80 16 10 N -0.88 -21.54 9.20 55.43 0.51 -21.03 16 11 Si 0.90 20.57 29.54 -169.99 -5.02 15.55 16 12 H -0.28 -6.37 7.11 56.52 0.40 -5.97 16 13 H -0.28 -6.40 7.11 56.52 0.40 -6.00 16 14 H -0.27 -6.33 7.11 56.52 0.40 -5.93 16 15 C -0.05 -0.99 4.64 -104.56 -0.49 -1.48 16 16 C -0.07 -1.44 7.31 -39.53 -0.29 -1.73 16 17 C 0.07 1.26 7.30 -39.43 -0.29 0.97 16 18 F -0.15 -2.72 17.27 2.25 0.04 -2.68 16 19 C -0.15 -2.55 10.02 -39.52 -0.40 -2.94 16 20 C -0.14 -2.48 10.02 -39.52 -0.40 -2.88 16 21 C 0.09 1.75 7.24 -39.43 -0.29 1.46 16 22 F -0.14 -2.93 16.57 2.25 0.04 -2.90 16 23 H 0.08 0.96 8.14 -51.92 -0.42 0.54 16 24 H 0.08 1.16 8.12 -51.93 -0.42 0.74 16 25 H 0.08 1.14 8.14 -51.93 -0.42 0.72 16 26 H 0.39 7.76 5.93 -40.82 -0.24 7.52 16 27 H 0.27 6.38 8.31 -40.82 -0.34 6.04 16 28 H 0.15 3.11 5.07 -52.49 -0.27 2.85 16 29 H 0.13 1.74 8.06 -52.49 -0.42 1.32 16 30 H 0.13 1.84 8.06 -52.49 -0.42 1.42 16 LS Contribution 270.93 15.07 4.08 4.08 Total: -1.00 -28.44 270.93 -5.45 -33.90 By element: Atomic # 1 Polarization: 8.50 SS G_CDS: -2.54 Total: 5.96 kcal Atomic # 6 Polarization: -0.84 SS G_CDS: -2.41 Total: -3.24 kcal Atomic # 7 Polarization: -36.55 SS G_CDS: 0.26 Total: -36.29 kcal Atomic # 8 Polarization: -14.47 SS G_CDS: 0.09 Total: -14.38 kcal Atomic # 9 Polarization: -5.65 SS G_CDS: 0.08 Total: -5.57 kcal Atomic # 14 Polarization: 20.57 SS G_CDS: -5.02 Total: 15.55 kcal Total LS contribution 4.08 Total: 4.08 kcal Total: -28.44 -5.45 -33.90 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259765130.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -70.935 kcal (2) G-P(sol) polarization free energy of solvation -28.443 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.378 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.453 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.896 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.831 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds