Wall clock time and date at job start Mon Mar 30 2020 06:22:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09002 * 110.87141 * 2 1 4 4 C 1.54450 * 110.95248 * 123.76097 * 2 1 3 5 5 C 1.51444 * 104.99921 * 143.71018 * 4 2 1 6 6 O 1.34817 * 141.52696 * 163.45566 * 5 4 2 7 7 C 1.34195 * 109.55155 * 180.02562 * 6 5 4 8 8 Cl 1.73596 * 125.79844 * 179.89330 * 7 6 5 9 9 C 1.34585 * 108.39953 * 359.63196 * 7 6 5 10 10 C 1.34266 * 110.25231 * 343.11797 * 5 4 2 11 11 C 1.51195 * 110.58822 * 0.02562 * 10 5 4 12 12 C 1.50694 * 110.34862 * 135.80803 * 11 10 5 13 13 H 1.08006 * 119.99996 * 123.76939 * 12 11 10 14 14 C 1.37882 * 120.00203 * 303.76690 * 12 11 10 15 15 N 1.31513 * 119.99598 * 5.30306 * 14 12 11 16 16 Si 1.86799 * 120.00140 * 185.30584 * 14 12 11 17 17 H 1.48504 * 109.47082 * 359.97438 * 16 14 12 18 18 H 1.48489 * 109.47275 * 120.00220 * 16 14 12 19 19 H 1.48501 * 109.47001 * 240.00296 * 16 14 12 20 20 C 1.52997 * 110.35323 * 257.98056 * 11 10 5 21 21 N 1.46900 * 109.46935 * 297.98062 * 20 11 10 22 22 H 1.08993 * 109.47088 * 183.75970 * 1 2 3 23 23 H 1.09000 * 109.46658 * 303.75883 * 1 2 3 24 24 H 1.08996 * 109.47099 * 63.75828 * 1 2 3 25 25 H 1.09004 * 110.33128 * 262.59007 * 4 2 1 26 26 H 1.09004 * 110.33516 * 24.82268 * 4 2 1 27 27 H 1.07996 * 126.60174 * 180.24518 * 9 7 6 28 28 H 0.97007 * 119.99816 * 179.97438 * 15 14 12 29 29 H 1.09006 * 109.47182 * 57.97075 * 20 11 10 30 30 H 1.08992 * 109.47231 * 177.97702 * 20 11 10 31 31 H 1.00894 * 111.00273 * 56.04217 * 21 20 11 32 32 H 1.00906 * 111.00068 * 180.02562 * 21 20 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.9183 1.0185 0.0000 4 6 2.0823 -0.8016 1.1991 5 6 3.3236 -1.4905 0.6717 6 8 4.4418 -2.1165 1.0904 7 6 5.1606 -2.5102 0.0279 8 17 6.6773 -3.3529 0.0838 9 6 4.5031 -2.1458 -1.0885 10 6 3.3208 -1.4893 -0.6709 11 6 2.0824 -0.8016 -1.1994 12 6 2.4409 0.1256 -2.3320 13 1 1.9641 0.0119 -3.2945 14 6 3.3774 1.1190 -2.1396 15 7 4.0336 1.1927 -1.0023 16 14 3.7142 2.3602 -3.4944 17 1 2.8515 2.0610 -4.6655 18 1 3.4184 3.7278 -2.9975 19 1 5.1411 2.2779 -3.8976 20 6 1.0565 -1.8368 -1.6650 21 7 1.6234 -2.6271 -2.7659 22 1 -0.3633 -1.0254 0.0674 23 1 -0.3632 0.5711 0.8544 24 1 -0.3633 0.4544 -0.9217 25 1 2.3408 -0.1293 2.0173 26 1 1.3514 -1.5392 1.5306 27 1 4.8171 -2.3209 -2.1069 28 1 4.6928 1.8914 -0.8670 29 1 0.8050 -2.4977 -0.8354 30 1 0.1566 -1.3272 -2.0092 31 1 2.4934 -3.0578 -2.4912 32 1 0.9643 -3.3183 -3.0916 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259981485.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:22:25 Heat of formation + Delta-G solvation = 30.349476 kcal Electronic energy + Delta-G solvation = -17769.296216 eV Core-core repulsion = 14951.177705 eV Total energy + Delta-G solvation = -2818.118512 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -41.75060 -37.77977 -36.33623 -32.98696 -32.22531 -31.54966 -29.14002 -27.65945 -24.87365 -24.02681 -22.27166 -20.31957 -19.19365 -18.40188 -16.86764 -15.73034 -15.10224 -14.98029 -14.57131 -14.00299 -13.95259 -13.26779 -13.00574 -12.27151 -12.14543 -12.11736 -11.67471 -11.47923 -11.29016 -11.00954 -10.82678 -10.67259 -10.46635 -10.28337 -10.08711 -9.92020 -9.49989 -8.80619 -8.60335 -8.23059 -7.72161 -7.13655 -5.87637 -3.95974 1.86033 2.55028 3.33705 3.43532 3.48018 3.76870 4.05792 4.50457 5.28673 5.51519 5.69461 5.84261 5.97753 6.00831 6.13327 6.21962 6.26956 6.36369 6.41545 6.54228 6.58432 6.76831 6.82530 6.98992 7.27674 7.32668 7.56539 7.63438 7.98686 8.06772 8.14750 8.26606 8.48668 9.07726 9.66880 11.12385 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.017591 B = 0.010316 C = 0.008399 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1591.378668 B = 2713.633993 C = 3333.070920 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C -0.074 4.074 3 H 0.105 0.895 4 C -0.006 4.006 5 C -0.060 4.060 6 O -0.174 6.174 7 C -0.007 4.007 8 Cl -0.010 7.010 9 C -0.128 4.128 10 C -0.083 4.083 11 C 0.131 3.869 12 C -0.484 4.484 13 H 0.066 0.934 14 C 0.064 3.936 15 N -0.876 5.876 16 Si 0.885 3.115 17 H -0.273 1.273 18 H -0.288 1.288 19 H -0.288 1.288 20 C 0.086 3.914 21 N -0.835 5.835 22 H 0.045 0.955 23 H 0.040 0.960 24 H 0.061 0.939 25 H 0.062 0.938 26 H 0.064 0.936 27 H 0.141 0.859 28 H 0.256 0.744 29 H -0.001 1.001 30 H 0.066 0.934 31 H 0.336 0.664 32 H 0.319 0.681 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.698 -6.196 2.788 7.311 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.195 4.195 2 C -0.093 4.093 3 H 0.123 0.877 4 C -0.043 4.043 5 C -0.109 4.109 6 O -0.074 6.074 7 C -0.082 4.082 8 Cl 0.019 6.981 9 C -0.148 4.148 10 C -0.085 4.085 11 C 0.130 3.870 12 C -0.522 4.522 13 H 0.084 0.916 14 C -0.139 4.139 15 N -0.514 5.514 16 Si 0.714 3.286 17 H -0.198 1.198 18 H -0.214 1.214 19 H -0.215 1.215 20 C -0.044 4.044 21 N -0.363 5.363 22 H 0.064 0.936 23 H 0.059 0.941 24 H 0.080 0.920 25 H 0.080 0.920 26 H 0.082 0.918 27 H 0.159 0.841 28 H 0.066 0.934 29 H 0.017 0.983 30 H 0.084 0.916 31 H 0.149 0.851 32 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges -2.316 -5.498 2.786 6.584 hybrid contribution 0.878 -0.113 -0.028 0.886 sum -1.438 -5.611 2.758 6.415 Atomic orbital electron populations 1.21814 0.96329 1.00340 1.01032 1.22053 0.92956 1.01796 0.92496 0.87736 1.20743 0.87832 0.96326 0.99417 1.22900 0.89327 1.02890 0.95808 1.83544 1.29363 1.60203 1.34263 1.21845 0.91077 1.09193 0.86066 1.98338 1.26134 1.75376 1.98300 1.20703 0.95095 1.02084 0.96968 1.21198 0.97213 0.96991 0.93099 1.17364 0.86001 0.90281 0.93310 1.20945 1.22414 1.12103 0.96760 0.91574 1.24958 0.95789 0.97775 0.95329 1.70033 1.24624 1.32852 1.23859 0.86641 0.77893 0.81383 0.82712 1.19789 1.21403 1.21474 1.21860 0.97936 0.94615 0.90033 1.58601 1.07812 1.29942 1.39991 0.93605 0.94071 0.92005 0.91962 0.91807 0.84113 0.93418 0.98318 0.91599 0.85098 0.87101 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.31 7.98 37.16 0.30 -2.02 16 2 C -0.07 -1.52 2.74 -89.08 -0.24 -1.76 16 3 H 0.10 2.50 6.43 -51.93 -0.33 2.16 16 4 C -0.01 -0.12 6.35 -26.76 -0.17 -0.29 16 5 C -0.06 -1.35 8.21 -35.34 -0.29 -1.64 16 6 O -0.17 -3.91 10.66 4.57 0.05 -3.86 16 7 C -0.01 -0.14 7.93 29.44 0.23 0.09 16 8 Cl -0.01 -0.17 29.30 -51.86 -1.52 -1.69 16 9 C -0.13 -2.83 10.04 -39.62 -0.40 -3.22 16 10 C -0.08 -1.90 3.26 -104.52 -0.34 -2.24 16 11 C 0.13 2.92 0.39 -155.80 -0.06 2.86 16 12 C -0.48 -12.28 7.79 -34.44 -0.27 -12.55 16 13 H 0.07 1.75 7.75 -52.48 -0.41 1.35 16 14 C 0.06 1.66 4.90 -17.82 -0.09 1.57 16 15 N -0.88 -23.67 10.69 55.43 0.59 -23.08 16 16 Si 0.89 20.97 29.54 -169.99 -5.02 15.95 16 17 H -0.27 -6.46 7.11 56.52 0.40 -6.06 16 18 H -0.29 -6.81 7.11 56.52 0.40 -6.41 16 19 H -0.29 -6.99 7.11 56.52 0.40 -6.59 16 20 C 0.09 1.66 4.47 -3.83 -0.02 1.64 16 21 N -0.84 -15.38 9.22 -10.37 -0.10 -15.47 16 22 H 0.04 0.70 6.60 -51.93 -0.34 0.35 16 23 H 0.04 0.60 8.14 -51.93 -0.42 0.18 16 24 H 0.06 1.05 7.80 -51.93 -0.41 0.65 16 25 H 0.06 1.17 8.14 -51.93 -0.42 0.75 16 26 H 0.06 1.08 7.83 -51.93 -0.41 0.68 16 27 H 0.14 2.99 8.06 -52.49 -0.42 2.56 16 28 H 0.26 6.86 8.31 -40.82 -0.34 6.52 16 29 H 0.00 -0.02 7.65 -51.93 -0.40 -0.42 16 30 H 0.07 1.24 6.90 -51.93 -0.36 0.89 16 31 H 0.34 6.27 7.33 -39.29 -0.29 5.99 16 32 H 0.32 4.84 9.08 -39.29 -0.36 4.48 16 LS Contribution 274.81 15.07 4.14 4.14 Total: -1.00 -27.60 274.81 -6.90 -34.50 By element: Atomic # 1 Polarization: 10.77 SS G_CDS: -3.70 Total: 7.07 kcal Atomic # 6 Polarization: -16.21 SS G_CDS: -1.35 Total: -17.56 kcal Atomic # 7 Polarization: -39.05 SS G_CDS: 0.50 Total: -38.55 kcal Atomic # 8 Polarization: -3.91 SS G_CDS: 0.05 Total: -3.86 kcal Atomic # 14 Polarization: 20.97 SS G_CDS: -5.02 Total: 15.95 kcal Atomic # 17 Polarization: -0.17 SS G_CDS: -1.52 Total: -1.69 kcal Total LS contribution 4.14 Total: 4.14 kcal Total: -27.60 -6.90 -34.50 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259981485.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 64.848 kcal (2) G-P(sol) polarization free energy of solvation -27.600 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.248 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.898 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.498 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.349 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds