Wall clock time and date at job start Mon Mar 30 2020 06:01:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35902 * 117.00051 * 2 1 4 4 C 1.38730 * 120.04584 * 0.02562 * 3 2 1 5 5 C 1.38241 * 119.93361 * 180.02562 * 4 3 2 6 6 Cl 1.73597 * 119.98756 * 180.02562 * 5 4 3 7 7 C 1.38410 * 120.02498 * 359.97438 * 5 4 3 8 8 C 1.38225 * 120.09870 * 0.04662 * 7 5 4 9 9 C 1.50696 * 119.96403 * 179.97438 * 8 7 5 10 10 H 1.09001 * 109.47545 * 145.00215 * 9 8 7 11 11 N 1.46900 * 109.47209 * 24.99912 * 9 8 7 12 12 C 1.50706 * 109.47259 * 264.99875 * 9 8 7 13 13 H 1.08005 * 119.99758 * 0.02562 * 12 9 8 14 14 C 1.37871 * 120.00102 * 180.02562 * 12 9 8 15 15 N 1.31516 * 120.00217 * 0.02562 * 14 12 9 16 16 Si 1.86800 * 119.99766 * 179.97438 * 14 12 9 17 17 H 1.48501 * 109.47057 * 179.97438 * 16 14 12 18 18 H 1.48500 * 109.47389 * 300.00068 * 16 14 12 19 19 H 1.48504 * 109.47102 * 60.00417 * 16 14 12 20 20 C 1.38168 * 120.06608 * 0.23164 * 8 7 5 21 21 C 1.50707 * 120.01125 * 179.74748 * 20 8 7 22 22 H 1.08998 * 109.47438 * 59.99529 * 1 2 3 23 23 H 1.09000 * 109.46765 * 179.97438 * 1 2 3 24 24 H 1.09004 * 109.47022 * 299.99161 * 1 2 3 25 25 H 1.08002 * 120.03938 * 0.03850 * 4 3 2 26 26 H 1.08000 * 119.95084 * 180.02562 * 7 5 4 27 27 H 1.00900 * 111.00100 * 299.99420 * 11 9 8 28 28 H 1.00898 * 111.00378 * 63.95632 * 11 9 8 29 29 H 0.97001 * 119.99646 * 359.97438 * 15 14 12 30 30 H 1.09000 * 109.47327 * 89.99903 * 21 20 8 31 31 H 1.09001 * 109.46520 * 210.00173 * 21 20 8 32 32 H 1.09000 * 109.46883 * 329.99897 * 21 20 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 1.2913 2.3750 0.0005 5 6 1.9214 3.6055 0.0000 6 17 0.9784 5.0631 0.0013 7 6 3.3037 3.6758 -0.0005 8 6 4.0567 2.5167 -0.0015 9 6 5.5616 2.5968 -0.0027 10 1 5.9697 1.7753 0.5861 11 7 5.9843 3.8761 0.5827 12 6 6.0687 2.5003 -1.4186 13 1 5.3710 2.3922 -2.2359 14 6 7.4233 2.5499 -1.6705 15 7 8.2729 2.6811 -0.6753 16 14 8.0518 2.4296 -3.4255 17 1 9.5347 2.5086 -3.4267 18 1 7.6241 1.1363 -4.0169 19 1 7.4964 3.5488 -4.2281 20 6 3.4311 1.2848 -0.0068 21 6 4.2534 0.0218 -0.0136 22 1 -0.3634 0.5139 -0.8899 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5137 0.8901 25 1 0.2127 2.3201 0.0016 26 1 3.7946 4.6378 -0.0005 27 1 5.6186 4.6540 0.0543 28 1 5.7120 3.9377 1.5523 29 1 7.9465 2.7432 0.2360 30 1 4.4526 -0.2876 1.0124 31 1 3.7052 -0.7657 -0.5307 32 1 5.1970 0.2054 -0.5275 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260037609.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:01:17 Heat of formation + Delta-G solvation = -28.681817 kcal Electronic energy + Delta-G solvation = -16891.360525 eV Core-core repulsion = 14070.682224 eV Total energy + Delta-G solvation = -2820.678301 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -40.10587 -37.79544 -36.41496 -34.50247 -32.18516 -31.47071 -29.04810 -27.53059 -26.28638 -25.51483 -22.81899 -21.22102 -20.18160 -17.65578 -16.72920 -16.32686 -15.68395 -15.52879 -14.66244 -14.16774 -14.05143 -13.65263 -13.35910 -13.22505 -12.51165 -12.36818 -12.31385 -11.82543 -11.49670 -11.45945 -11.02173 -10.93570 -10.76051 -10.69659 -10.39619 -10.15929 -9.99403 -8.93996 -8.37668 -7.98213 -7.80551 -7.58427 -6.21246 -4.05437 1.52532 1.72904 2.32212 3.40023 3.47772 3.49014 3.67508 3.99191 4.59301 5.00133 5.04859 5.12174 5.33696 5.37304 5.40604 5.44637 5.64998 5.92776 5.97360 6.07813 6.14922 6.26764 6.46432 6.58169 6.75611 6.90697 7.09663 7.22578 7.55796 7.91174 8.24589 8.60424 8.70215 9.01128 9.77642 11.18477 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.020384 B = 0.007231 C = 0.006076 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1373.287255 B = 3871.166526 C = 4607.310680 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.311 6.311 3 C 0.131 3.869 4 C -0.222 4.222 5 C 0.000 4.000 6 Cl -0.086 7.086 7 C -0.150 4.150 8 C -0.021 4.021 9 C 0.239 3.761 10 H 0.049 0.951 11 N -0.830 5.830 12 C -0.606 4.606 13 H 0.047 0.953 14 C 0.041 3.959 15 N -0.888 5.888 16 Si 1.062 2.938 17 H -0.283 1.283 18 H -0.289 1.289 19 H -0.290 1.290 20 C -0.104 4.104 21 C -0.108 4.108 22 H 0.053 0.947 23 H 0.097 0.903 24 H 0.052 0.948 25 H 0.129 0.871 26 H 0.129 0.871 27 H 0.327 0.673 28 H 0.304 0.696 29 H 0.290 0.710 30 H 0.059 0.941 31 H 0.060 0.940 32 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.257 -1.986 2.465 14.605 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.224 6.224 3 C 0.086 3.914 4 C -0.241 4.241 5 C -0.026 4.026 6 Cl -0.057 7.057 7 C -0.169 4.169 8 C -0.024 4.024 9 C 0.130 3.870 10 H 0.067 0.933 11 N -0.358 5.358 12 C -0.645 4.645 13 H 0.066 0.934 14 C -0.169 4.169 15 N -0.521 5.521 16 Si 0.891 3.109 17 H -0.209 1.209 18 H -0.216 1.216 19 H -0.216 1.216 20 C -0.106 4.106 21 C -0.165 4.165 22 H 0.071 0.929 23 H 0.115 0.885 24 H 0.071 0.929 25 H 0.147 0.853 26 H 0.146 0.854 27 H 0.141 0.859 28 H 0.115 0.885 29 H 0.103 0.897 30 H 0.077 0.923 31 H 0.079 0.921 32 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -12.105 -2.293 1.412 12.401 hybrid contribution -3.121 0.634 0.968 3.329 sum -15.226 -1.659 2.379 15.500 Atomic orbital electron populations 1.23009 0.79116 1.03517 1.01166 1.86087 1.20709 1.26681 1.88958 1.18692 0.91723 0.83418 0.97578 1.20767 0.99728 0.90738 1.12902 1.20503 0.91613 0.86263 1.04266 1.98328 1.73154 1.37177 1.97060 1.20795 0.90821 0.99734 1.05599 1.21297 1.00452 0.90159 0.90518 1.18452 0.81987 0.89316 0.97215 0.93320 1.59439 1.67274 1.05218 1.03916 1.21590 0.94306 1.58626 0.89978 0.93449 1.25601 0.93030 0.93107 1.05203 1.70561 1.37934 1.41517 1.02129 0.83661 0.76187 0.76415 0.74619 1.20857 1.21573 1.21636 1.19268 0.89720 0.96765 1.04809 1.20686 1.00789 0.93335 1.01678 0.92869 0.88483 0.92930 0.85342 0.85366 0.85863 0.88544 0.89728 0.92258 0.92106 0.88811 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.29 9.81 101.05 0.99 1.28 16 2 O -0.31 -4.79 9.55 -19.43 -0.19 -4.97 16 3 C 0.13 2.29 6.66 -39.22 -0.26 2.03 16 4 C -0.22 -3.59 8.82 -39.40 -0.35 -3.94 16 5 C 0.00 0.00 6.32 -39.52 -0.25 -0.25 16 6 Cl -0.09 -1.27 28.95 -51.86 -1.50 -2.77 16 7 C -0.15 -2.86 9.05 -39.52 -0.36 -3.22 16 8 C -0.02 -0.45 4.98 -104.65 -0.52 -0.97 16 9 C 0.24 5.62 1.78 -70.02 -0.12 5.50 16 10 H 0.05 1.23 6.87 -51.93 -0.36 0.87 16 11 N -0.83 -18.36 7.39 -6.65 -0.05 -18.41 16 12 C -0.61 -16.19 7.91 -34.44 -0.27 -16.46 16 13 H 0.05 1.31 7.74 -52.48 -0.41 0.90 16 14 C 0.04 1.13 5.39 -17.82 -0.10 1.03 16 15 N -0.89 -25.95 13.51 55.43 0.75 -25.20 16 16 Si 1.06 24.80 29.90 -169.99 -5.08 19.71 16 17 H -0.28 -6.65 7.11 56.52 0.40 -6.25 16 18 H -0.29 -6.48 7.11 56.52 0.40 -6.08 16 19 H -0.29 -6.59 7.11 56.52 0.40 -6.19 16 20 C -0.10 -2.04 5.89 -104.47 -0.62 -2.66 16 21 C -0.11 -2.02 8.99 36.01 0.32 -1.70 16 22 H 0.05 0.52 7.66 -51.93 -0.40 0.12 16 23 H 0.10 0.77 8.14 -51.93 -0.42 0.35 16 24 H 0.05 0.50 7.66 -51.93 -0.40 0.10 16 25 H 0.13 1.74 6.30 -52.49 -0.33 1.41 16 26 H 0.13 2.37 6.28 -52.49 -0.33 2.04 16 27 H 0.33 7.05 7.20 -39.29 -0.28 6.77 16 28 H 0.30 5.93 9.06 -39.29 -0.36 5.57 16 29 H 0.29 8.45 6.40 -40.82 -0.26 8.19 16 30 H 0.06 1.01 8.14 -51.93 -0.42 0.59 16 31 H 0.06 1.04 7.54 -51.93 -0.39 0.65 16 32 H 0.09 1.97 6.14 -51.93 -0.32 1.65 16 LS Contribution 281.36 15.07 4.24 4.24 Total: -1.00 -29.23 281.36 -6.83 -36.06 By element: Atomic # 1 Polarization: 14.17 SS G_CDS: -3.47 Total: 10.70 kcal Atomic # 6 Polarization: -17.82 SS G_CDS: -1.53 Total: -19.35 kcal Atomic # 7 Polarization: -44.31 SS G_CDS: 0.70 Total: -43.61 kcal Atomic # 8 Polarization: -4.79 SS G_CDS: -0.19 Total: -4.97 kcal Atomic # 14 Polarization: 24.80 SS G_CDS: -5.08 Total: 19.71 kcal Atomic # 17 Polarization: -1.27 SS G_CDS: -1.50 Total: -2.77 kcal Total LS contribution 4.24 Total: 4.24 kcal Total: -29.23 -6.83 -36.06 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260037609.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.375 kcal (2) G-P(sol) polarization free energy of solvation -29.226 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.850 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.831 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.057 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.682 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds