Wall clock time and date at job start Mon Mar 30 2020 06:49:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35928 * 116.99512 * 2 1 4 4 C 1.38703 * 120.06520 * 359.73425 * 3 2 1 5 5 C 1.38149 * 119.96118 * 179.69716 * 4 3 2 6 6 C 1.50695 * 119.96445 * 180.29149 * 5 4 3 7 7 H 1.08998 * 109.46993 * 0.27795 * 6 5 4 8 8 C 1.50704 * 109.47027 * 120.27876 * 6 5 4 9 9 H 1.07999 * 119.99703 * 359.97438 * 8 6 5 10 10 C 1.37874 * 119.99900 * 180.02562 * 8 6 5 11 11 N 1.31520 * 120.00467 * 359.97438 * 10 8 6 12 12 Si 1.86802 * 119.99836 * 179.97438 * 10 8 6 13 13 H 1.48496 * 109.47145 * 59.99837 * 12 10 8 14 14 H 1.48508 * 109.46993 * 179.97438 * 12 10 8 15 15 H 1.48493 * 109.47030 * 299.99587 * 12 10 8 16 16 C 1.53001 * 109.47375 * 240.27687 * 6 5 4 17 17 N 1.46901 * 109.46944 * 65.00279 * 16 6 5 18 18 C 1.38275 * 120.07332 * 0.57267 * 5 4 3 19 19 C 1.38244 * 120.12327 * 359.72092 * 18 5 4 20 20 C 1.38261 * 120.03816 * 359.97438 * 19 18 5 21 21 Cl 1.73607 * 120.03760 * 180.02562 * 20 19 18 22 22 H 1.09002 * 109.47382 * 59.99664 * 1 2 3 23 23 H 1.09001 * 109.46938 * 299.99651 * 1 2 3 24 24 H 1.09004 * 109.46926 * 179.97438 * 1 2 3 25 25 H 1.08005 * 120.01948 * 359.97438 * 4 3 2 26 26 H 0.96996 * 120.00088 * 179.97438 * 11 10 8 27 27 H 1.09002 * 109.47340 * 184.99849 * 16 6 5 28 28 H 1.08999 * 109.46874 * 305.00414 * 16 6 5 29 29 H 1.00901 * 110.99760 * 180.02562 * 17 16 6 30 30 H 1.00904 * 110.99915 * 303.94856 * 17 16 6 31 31 H 1.08003 * 119.94047 * 179.74571 * 18 5 4 32 32 H 1.08002 * 119.98548 * 180.02562 * 19 18 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2112 0.0000 4 6 1.2918 2.3752 -0.0056 5 6 1.9211 3.6051 0.0008 6 6 1.1017 4.8698 0.0014 7 1 0.0417 4.6159 0.0013 8 6 1.4249 5.6771 1.2322 9 1 2.1507 5.3107 1.9431 10 6 0.7932 6.8829 1.4512 11 7 -0.0910 7.3289 0.5858 12 14 1.1933 7.8832 2.9772 13 1 2.6373 8.2294 2.9777 14 1 0.3859 9.1297 2.9778 15 1 0.8749 7.0862 4.1890 16 6 1.4297 5.6906 -1.2475 17 7 1.0042 4.9525 -2.4442 18 6 3.3020 3.6769 0.0007 19 6 4.0569 2.5188 0.0001 20 6 3.4322 1.2853 0.0001 21 17 4.3803 -0.1690 0.0001 22 1 -0.3634 0.5139 -0.8900 23 1 -0.3633 0.5138 0.8900 24 1 -0.3633 -1.0277 -0.0005 25 1 0.2132 2.3202 -0.0103 26 1 -0.5357 8.1770 0.7401 27 1 0.9046 6.6448 -1.2034 28 1 2.5040 5.8687 -1.2934 29 1 1.2104 5.4740 -3.2830 30 1 1.4281 4.0373 -2.4744 31 1 3.7917 4.6395 0.0015 32 1 5.1354 2.5774 0.0005 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260043198.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:49:33 Heat of formation + Delta-G solvation = -29.006351 kcal Electronic energy + Delta-G solvation = -16775.361738 eV Core-core repulsion = 13954.669364 eV Total energy + Delta-G solvation = -2820.692373 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -39.83603 -37.52197 -36.20019 -34.74414 -32.26488 -30.80495 -29.77692 -27.90340 -26.56643 -23.97603 -22.33805 -21.86323 -19.76106 -17.38302 -16.53967 -15.95781 -15.69544 -15.51905 -14.95000 -14.49704 -14.04331 -13.63007 -13.29541 -13.14604 -12.88926 -12.09216 -11.87036 -11.57167 -11.33864 -11.23679 -11.07543 -10.93817 -10.62040 -10.52671 -10.42013 -10.17362 -9.57688 -9.31619 -8.55227 -8.23820 -7.69960 -7.62636 -6.12107 -4.21100 1.71100 1.83487 2.56796 3.25318 3.30559 3.33341 3.48509 4.16027 4.36263 5.13636 5.17348 5.24714 5.35665 5.55419 5.62117 5.67335 5.76490 5.80071 5.99800 6.26040 6.48368 6.67872 6.80640 6.83830 7.08279 7.16037 7.51921 7.63172 7.75481 7.82320 8.10257 8.28016 8.32955 8.82992 9.44437 10.92567 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.024314 B = 0.006196 C = 0.005924 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1151.326515 B = 4517.805767 C = 4725.361147 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.313 6.313 3 C 0.131 3.869 4 C -0.200 4.200 5 C 0.012 3.988 6 C 0.080 3.920 7 H 0.045 0.955 8 C -0.515 4.515 9 H 0.060 0.940 10 C 0.065 3.935 11 N -0.883 5.883 12 Si 0.895 3.105 13 H -0.276 1.276 14 H -0.286 1.286 15 H -0.276 1.276 16 C 0.068 3.932 17 N -0.853 5.853 18 C -0.141 4.141 19 C -0.080 4.080 20 C -0.091 4.091 21 Cl -0.083 7.083 22 H 0.057 0.943 23 H 0.057 0.943 24 H 0.095 0.905 25 H 0.132 0.868 26 H 0.264 0.736 27 H 0.109 0.891 28 H 0.001 0.999 29 H 0.322 0.678 30 H 0.321 0.679 31 H 0.131 0.869 32 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.865 -9.749 -2.813 10.858 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.227 6.227 3 C 0.085 3.915 4 C -0.219 4.219 5 C 0.011 3.989 6 C 0.061 3.939 7 H 0.063 0.937 8 C -0.554 4.554 9 H 0.078 0.922 10 C -0.138 4.138 11 N -0.521 5.521 12 Si 0.722 3.278 13 H -0.202 1.202 14 H -0.212 1.212 15 H -0.202 1.202 16 C -0.062 4.062 17 N -0.380 5.380 18 C -0.159 4.159 19 C -0.099 4.099 20 C -0.118 4.118 21 Cl -0.055 7.055 22 H 0.076 0.924 23 H 0.075 0.925 24 H 0.114 0.886 25 H 0.150 0.850 26 H 0.074 0.926 27 H 0.126 0.874 28 H 0.019 0.981 29 H 0.132 0.868 30 H 0.132 0.868 31 H 0.149 0.851 32 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 3.155 -9.842 -2.527 10.640 hybrid contribution 1.054 0.608 0.627 1.369 sum 4.209 -9.234 -1.900 10.324 Atomic orbital electron populations 1.23044 0.78498 1.03391 1.01863 1.86075 1.21232 1.26520 1.88850 1.18671 0.90324 0.84889 0.97611 1.21225 1.00098 0.91100 1.09468 1.20608 0.94036 0.95938 0.88294 1.17969 0.94954 0.87236 0.93738 0.93652 1.21018 1.24394 1.04262 1.05706 0.92188 1.24982 0.94704 0.97489 0.96596 1.69871 1.26230 1.20851 1.35146 0.86609 0.78459 0.79397 0.83318 1.20161 1.21172 1.20161 1.22119 0.95762 1.00259 0.88054 1.58986 1.67321 1.06479 1.05252 1.21007 0.93880 0.97553 1.03474 1.20834 0.99858 0.90004 0.99179 1.19947 0.88318 0.87771 1.15781 1.98305 1.72110 1.37519 1.97528 0.92441 0.92469 0.88624 0.85004 0.92635 0.87351 0.98110 0.86778 0.86838 0.85093 0.85359 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.33 9.81 101.05 0.99 1.32 16 2 O -0.31 -4.99 9.96 -19.51 -0.19 -5.19 16 3 C 0.13 2.29 6.68 -39.20 -0.26 2.03 16 4 C -0.20 -3.71 8.66 -39.44 -0.34 -4.05 16 5 C 0.01 0.23 3.77 -104.64 -0.39 -0.16 16 6 C 0.08 1.87 2.16 -92.92 -0.20 1.67 16 7 H 0.05 1.19 7.87 -51.93 -0.41 0.78 16 8 C -0.52 -13.30 8.24 -34.44 -0.28 -13.59 16 9 H 0.06 1.55 7.60 -52.49 -0.40 1.15 16 10 C 0.06 1.70 5.29 -17.82 -0.09 1.60 16 11 N -0.88 -23.98 11.30 55.43 0.63 -23.36 16 12 Si 0.89 20.43 29.54 -169.99 -5.02 15.41 16 13 H -0.28 -6.23 7.11 56.52 0.40 -5.83 16 14 H -0.29 -6.50 7.11 56.52 0.40 -6.10 16 15 H -0.28 -6.32 7.11 56.52 0.40 -5.91 16 16 C 0.07 1.52 5.98 -3.82 -0.02 1.49 16 17 N -0.85 -16.41 9.62 -10.37 -0.10 -16.51 16 18 C -0.14 -2.62 8.65 -39.57 -0.34 -2.97 16 19 C -0.08 -1.33 9.83 -39.57 -0.39 -1.72 16 20 C -0.09 -1.56 6.33 -39.36 -0.25 -1.81 16 21 Cl -0.08 -1.28 28.51 -51.86 -1.48 -2.75 16 22 H 0.06 0.67 7.65 -51.93 -0.40 0.27 16 23 H 0.06 0.69 7.67 -51.93 -0.40 0.29 16 24 H 0.10 0.89 8.14 -51.93 -0.42 0.46 16 25 H 0.13 2.33 6.19 -52.48 -0.32 2.00 16 26 H 0.26 6.88 8.31 -40.82 -0.34 6.54 16 27 H 0.11 2.76 5.95 -51.93 -0.31 2.45 16 28 H 0.00 0.01 7.22 -51.93 -0.37 -0.36 16 29 H 0.32 5.43 9.08 -39.29 -0.36 5.08 16 30 H 0.32 5.83 8.07 -39.29 -0.32 5.51 16 31 H 0.13 2.45 7.54 -52.48 -0.40 2.05 16 32 H 0.13 1.81 8.06 -52.49 -0.42 1.38 16 LS Contribution 284.99 15.07 4.29 4.29 Total: -1.00 -27.39 284.99 -7.12 -34.52 By element: Atomic # 1 Polarization: 13.42 SS G_CDS: -3.66 Total: 9.76 kcal Atomic # 6 Polarization: -14.58 SS G_CDS: -1.59 Total: -16.17 kcal Atomic # 7 Polarization: -40.39 SS G_CDS: 0.53 Total: -39.87 kcal Atomic # 8 Polarization: -4.99 SS G_CDS: -0.19 Total: -5.19 kcal Atomic # 14 Polarization: 20.43 SS G_CDS: -5.02 Total: 15.41 kcal Atomic # 17 Polarization: -1.28 SS G_CDS: -1.48 Total: -2.75 kcal Total LS contribution 4.29 Total: 4.29 kcal Total: -27.39 -7.12 -34.52 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260043198.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.509 kcal (2) G-P(sol) polarization free energy of solvation -27.393 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.884 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.122 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.515 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.006 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds