Wall clock time and date at job start Mon Mar 30 2020 06:39:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46897 * 1 3 3 C 1.48537 * 111.00088 * 2 1 4 4 C 1.54938 * 103.22729 * 200.28060 * 3 2 1 5 5 C 1.54593 * 102.92221 * 37.41462 * 4 3 2 6 6 H 1.08995 * 110.30954 * 96.95507 * 5 4 3 7 7 C 1.50696 * 110.39286 * 219.08686 * 5 4 3 8 8 H 1.07999 * 120.00622 * 115.76048 * 7 5 4 9 9 C 1.37884 * 119.99682 * 295.76481 * 7 5 4 10 10 N 1.31512 * 120.00136 * 359.97438 * 9 7 5 11 11 Si 1.86798 * 120.00020 * 179.97438 * 9 7 5 12 12 H 1.48507 * 109.47016 * 89.99664 * 11 9 7 13 13 H 1.48494 * 109.47420 * 209.99729 * 11 9 7 14 14 H 1.48497 * 109.47247 * 330.00170 * 11 9 7 15 15 C 1.47899 * 111.00104 * 242.60588 * 2 1 3 16 16 H 1.08999 * 110.08204 * 26.39421 * 15 2 1 17 17 C 1.50707 * 109.91599 * 265.19687 * 15 2 1 18 18 C 1.34484 * 125.77781 * 142.40590 * 17 15 2 19 19 C 1.41408 * 106.85012 * 180.02562 * 18 17 15 20 20 C 1.34652 * 106.83150 * 0.02562 * 19 18 17 21 21 Cl 1.73602 * 125.80607 * 179.97438 * 20 19 18 22 22 O 1.34304 * 108.39541 * 359.97438 * 20 19 18 23 23 H 1.08996 * 109.47591 * 177.39997 * 1 2 3 24 24 H 1.09006 * 109.47130 * 297.39699 * 1 2 3 25 25 H 1.08998 * 109.47186 * 57.39675 * 1 2 3 26 26 H 1.08994 * 110.66893 * 81.84323 * 3 2 1 27 27 H 1.09005 * 110.80900 * 318.78348 * 3 2 1 28 28 H 1.08997 * 110.71892 * 279.05237 * 4 3 2 29 29 H 1.09003 * 110.87589 * 155.84205 * 4 3 2 30 30 H 0.96992 * 120.00332 * 179.97438 * 10 9 7 31 31 H 1.07999 * 126.57989 * 0.02562 * 18 17 15 32 32 H 1.08003 * 126.58941 * 180.02562 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 2.0013 1.3867 0.0000 4 6 3.4491 1.2106 -0.5228 5 6 3.2982 0.1054 -1.5931 6 1 3.2135 0.5486 -2.5853 7 6 4.4712 -0.8392 -1.5415 8 1 4.3197 -1.8744 -1.2733 9 6 5.7381 -0.3819 -1.8365 10 7 5.9227 0.8784 -2.1635 11 14 7.1923 -1.5526 -1.7718 12 1 7.3793 -2.1837 -3.1031 13 1 8.4182 -0.7995 -1.4045 14 1 6.9353 -2.6056 -0.7567 15 6 1.9990 -0.6353 -1.2259 16 1 1.2771 -0.5432 -2.0373 17 6 2.2938 -2.0899 -0.9640 18 6 2.0966 -3.1002 -1.8294 19 6 2.5052 -4.2856 -1.1755 20 6 2.9275 -3.9280 0.0520 21 17 3.5369 -5.0045 1.2701 22 8 2.7972 -2.5969 0.1740 23 1 -0.3634 -1.0265 -0.0466 24 1 -0.3634 0.4729 0.9125 25 1 -0.3633 0.5537 -0.8657 26 1 2.0041 1.7977 1.0095 27 1 1.4245 2.0229 -0.6714 28 1 4.1115 0.8837 0.2787 29 1 3.8152 2.1343 -0.9711 30 1 6.8139 1.2002 -2.3707 31 1 1.7019 -3.0215 -2.8316 32 1 2.4828 -5.2858 -1.5824 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260235443.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:39:19 Heat of formation + Delta-G solvation = 24.603704 kcal Electronic energy + Delta-G solvation = -17443.871158 eV Core-core repulsion = 14625.503491 eV Total energy + Delta-G solvation = -2818.367667 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -42.00602 -38.19846 -36.48753 -33.26376 -32.45340 -30.75102 -30.20476 -26.83983 -25.47935 -23.74475 -21.36408 -21.05294 -20.07517 -19.15795 -17.27381 -16.35600 -15.54478 -15.05930 -14.81104 -14.35336 -13.73891 -13.22484 -12.81241 -12.75807 -12.49443 -12.22144 -11.95744 -11.70092 -11.58617 -11.10109 -11.07068 -10.78355 -10.66979 -10.63107 -10.33010 -9.77851 -9.51563 -9.26538 -8.89356 -8.42939 -7.96884 -7.55312 -6.04754 -4.05809 1.76933 2.30487 3.17393 3.32179 3.38820 3.46075 4.13766 4.45339 4.49651 5.29692 5.48518 5.50079 5.55782 5.61455 5.80148 5.87896 6.01799 6.12948 6.16043 6.21745 6.36985 6.41313 6.52874 6.88331 7.01004 7.05689 7.27457 7.48353 7.54779 7.77229 7.85242 7.94895 8.31902 8.93611 9.59054 11.05427 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.014224 B = 0.012060 C = 0.007491 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1968.004667 B = 2321.107684 C = 3736.857094 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 N -0.516 5.516 3 C 0.030 3.970 4 C -0.094 4.094 5 C 0.049 3.951 6 H 0.041 0.959 7 C -0.508 4.508 8 H 0.066 0.934 9 C 0.067 3.933 10 N -0.890 5.890 11 Si 0.884 3.116 12 H -0.280 1.280 13 H -0.286 1.286 14 H -0.271 1.271 15 C 0.135 3.865 16 H 0.069 0.931 17 C 0.114 3.886 18 C -0.244 4.244 19 C -0.171 4.171 20 C -0.002 4.002 21 Cl -0.003 7.003 22 O -0.142 6.142 23 H 0.061 0.939 24 H 0.064 0.936 25 H 0.024 0.976 26 H 0.069 0.931 27 H 0.034 0.966 28 H 0.065 0.935 29 H 0.065 0.935 30 H 0.260 0.740 31 H 0.146 0.854 32 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.617 -4.744 2.659 10.190 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 N -0.240 5.240 3 C -0.098 4.098 4 C -0.132 4.132 5 C 0.030 3.970 6 H 0.059 0.941 7 C -0.546 4.546 8 H 0.084 0.916 9 C -0.135 4.135 10 N -0.529 5.529 11 Si 0.712 3.288 12 H -0.207 1.207 13 H -0.212 1.212 14 H -0.196 1.196 15 C 0.027 3.973 16 H 0.087 0.913 17 C 0.062 3.938 18 C -0.264 4.264 19 C -0.192 4.192 20 C -0.078 4.078 21 Cl 0.026 6.974 22 O -0.038 6.038 23 H 0.080 0.920 24 H 0.083 0.917 25 H 0.042 0.958 26 H 0.088 0.912 27 H 0.053 0.947 28 H 0.084 0.916 29 H 0.083 0.917 30 H 0.070 0.930 31 H 0.164 0.836 32 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -8.191 -4.827 3.459 10.117 hybrid contribution 0.718 -0.448 -0.685 1.088 sum -7.474 -5.274 2.774 9.559 Atomic orbital electron populations 1.22504 0.89089 1.01330 1.00278 1.64524 1.06668 1.15979 1.36790 1.23374 0.98207 0.88175 1.00011 1.22468 0.91816 0.99736 0.99204 1.19603 0.89431 0.92784 0.95190 0.94078 1.21246 0.91248 0.95616 1.46513 0.91585 1.24886 0.98723 0.94966 0.94896 1.69945 1.22271 1.13988 1.46668 0.86686 0.82265 0.81315 0.78540 1.20651 1.21226 1.19615 1.21416 0.99552 0.86164 0.90174 0.91318 1.22033 0.93996 0.94945 0.82849 1.21249 1.12399 0.91096 1.01624 1.21261 1.05449 1.00108 0.92334 1.22141 1.10489 0.82534 0.92642 1.98360 1.86496 1.56774 1.55774 1.84088 1.63768 1.18179 1.37764 0.91982 0.91726 0.95797 0.91240 0.94731 0.91638 0.91676 0.93033 0.83575 0.83540 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.25 9.40 60.06 0.56 0.82 16 2 N -0.52 -9.75 5.16 -232.16 -1.20 -10.95 16 3 C 0.03 0.54 6.56 -1.89 -0.01 0.53 16 4 C -0.09 -2.11 5.75 -24.87 -0.14 -2.25 16 5 C 0.05 1.16 2.86 -90.42 -0.26 0.90 16 6 H 0.04 1.04 8.14 -51.93 -0.42 0.62 16 7 C -0.51 -13.60 7.79 -34.44 -0.27 -13.87 16 8 H 0.07 1.81 4.80 -52.49 -0.25 1.56 16 9 C 0.07 1.84 5.34 -17.82 -0.10 1.75 16 10 N -0.89 -24.99 12.62 55.43 0.70 -24.29 16 11 Si 0.88 21.76 29.54 -169.99 -5.02 16.74 16 12 H -0.28 -6.82 7.11 56.52 0.40 -6.42 16 13 H -0.29 -6.98 7.11 56.52 0.40 -6.58 16 14 H -0.27 -6.78 7.11 56.52 0.40 -6.37 16 15 C 0.14 2.75 2.92 -67.79 -0.20 2.56 16 16 H 0.07 1.27 7.74 -51.93 -0.40 0.86 16 17 C 0.11 2.39 3.81 -35.63 -0.14 2.25 16 18 C -0.24 -4.58 10.66 -39.70 -0.42 -5.01 16 19 C -0.17 -3.06 10.88 -39.65 -0.43 -3.49 16 20 C 0.00 -0.04 7.90 29.46 0.23 0.20 16 21 Cl 0.00 -0.04 29.30 -51.86 -1.52 -1.56 16 22 O -0.14 -3.15 9.86 5.52 0.05 -3.09 16 23 H 0.06 0.90 8.14 -51.93 -0.42 0.48 16 24 H 0.06 0.86 8.14 -51.93 -0.42 0.44 16 25 H 0.02 0.33 8.01 -51.93 -0.42 -0.09 16 26 H 0.07 1.18 8.14 -51.93 -0.42 0.76 16 27 H 0.03 0.58 7.97 -51.93 -0.41 0.17 16 28 H 0.06 1.63 7.86 -51.93 -0.41 1.22 16 29 H 0.06 1.51 8.12 -51.93 -0.42 1.09 16 30 H 0.26 7.03 8.31 -40.82 -0.34 6.69 16 31 H 0.15 2.39 8.06 -52.49 -0.42 1.97 16 32 H 0.15 2.15 8.06 -52.48 -0.42 1.73 16 LS Contribution 283.16 15.07 4.27 4.27 Total: -1.00 -28.51 283.16 -7.87 -36.38 By element: Atomic # 1 Polarization: 2.10 SS G_CDS: -3.98 Total: -1.89 kcal Atomic # 6 Polarization: -14.44 SS G_CDS: -1.17 Total: -15.61 kcal Atomic # 7 Polarization: -34.74 SS G_CDS: -0.50 Total: -35.23 kcal Atomic # 8 Polarization: -3.15 SS G_CDS: 0.05 Total: -3.09 kcal Atomic # 14 Polarization: 21.76 SS G_CDS: -5.02 Total: 16.74 kcal Atomic # 17 Polarization: -0.04 SS G_CDS: -1.52 Total: -1.56 kcal Total LS contribution 4.27 Total: 4.27 kcal Total: -28.51 -7.87 -36.38 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260235443.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.983 kcal (2) G-P(sol) polarization free energy of solvation -28.509 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 32.474 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.871 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.379 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.604 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds