Wall clock time and date at job start Mon Mar 30 2020 06:39:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46895 * 1 3 3 C 1.47901 * 111.00158 * 2 1 4 4 C 1.53985 * 107.06099 * 145.84452 * 3 2 1 5 5 C 1.54600 * 105.14106 * 358.77845 * 4 3 2 6 6 H 1.08997 * 110.72659 * 96.57617 * 5 4 3 7 7 C 1.50706 * 110.72246 * 219.68867 * 5 4 3 8 8 H 1.07999 * 120.00193 * 118.54762 * 7 5 4 9 9 C 1.37879 * 119.99398 * 298.53842 * 7 5 4 10 10 N 1.31514 * 120.00338 * 0.02562 * 9 7 5 11 11 Si 1.86800 * 119.99424 * 180.02562 * 9 7 5 12 12 H 1.48503 * 109.46845 * 180.02562 * 11 9 7 13 13 H 1.48503 * 109.47399 * 299.99813 * 11 9 7 14 14 H 1.48498 * 109.47295 * 60.00420 * 11 9 7 15 15 C 1.48529 * 111.00268 * 117.39712 * 2 1 3 16 16 H 1.09006 * 110.66532 * 318.71560 * 15 2 1 17 17 C 1.50696 * 110.66967 * 81.84250 * 15 2 1 18 18 C 1.34491 * 125.78356 * 213.80988 * 17 15 2 19 19 C 1.41406 * 106.85626 * 180.02562 * 18 17 15 20 20 C 1.34648 * 106.82822 * 359.97438 * 19 18 17 21 21 Cl 1.73604 * 125.80141 * 180.02562 * 20 19 18 22 22 O 1.34305 * 108.39940 * 359.73501 * 20 19 18 23 23 H 1.08994 * 109.47375 * 59.87353 * 1 2 3 24 24 H 1.09000 * 109.47454 * 179.87349 * 1 2 3 25 25 H 1.09001 * 109.47271 * 299.87424 * 1 2 3 26 26 H 1.08999 * 109.91707 * 26.49162 * 3 2 1 27 27 H 1.09000 * 110.08099 * 265.29507 * 3 2 1 28 28 H 1.08999 * 110.31308 * 239.85890 * 4 3 2 29 29 H 1.08998 * 110.31102 * 117.68918 * 4 3 2 30 30 H 0.97000 * 119.99706 * 359.97438 * 10 9 7 31 31 H 1.08004 * 126.57020 * 0.02562 * 18 17 15 32 32 H 1.08001 * 126.58545 * 179.97438 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9990 1.3808 0.0000 4 6 3.2982 1.3659 0.8265 5 6 3.4492 -0.0929 1.3153 6 1 4.1140 -0.6532 0.6579 7 6 3.9512 -0.1301 2.7358 8 1 3.3470 -0.5786 3.5105 9 6 5.1820 0.4083 3.0462 10 7 5.9176 0.9546 2.1029 11 14 5.8045 0.3616 4.8068 12 1 7.1430 1.0012 4.8757 13 1 4.8595 1.0963 5.6857 14 1 5.9059 -1.0493 5.2588 15 6 2.0013 -0.6381 1.2311 16 1 1.4237 -0.3323 2.1035 17 6 2.0052 -2.1387 1.0934 18 6 1.7926 -3.0201 2.0867 19 6 1.8868 -4.3108 1.5168 20 6 2.1512 -4.1405 0.2076 21 17 2.3644 -5.4085 -0.9587 22 8 2.2155 -2.8228 -0.0439 23 1 -0.3634 0.5158 -0.8888 24 1 -0.3634 -1.0276 -0.0023 25 1 -0.3634 0.5119 0.8911 26 1 1.2758 2.0561 0.4571 27 1 2.2115 1.7001 -1.0203 28 1 3.2136 2.0429 1.6766 29 1 4.1469 1.6454 0.2023 30 1 5.5944 0.9785 1.1886 31 1 1.5889 -2.7868 3.1214 32 1 1.7693 -5.2524 2.0327 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260235451.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:39:34 Heat of formation + Delta-G solvation = 14.563517 kcal Electronic energy + Delta-G solvation = -17136.918732 eV Core-core repulsion = 14318.115690 eV Total energy + Delta-G solvation = -2818.803042 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 3.53 seconds Orbital eigenvalues (eV) -42.20804 -38.38971 -36.73640 -33.64588 -32.73793 -30.61604 -30.36440 -27.00722 -25.32135 -23.78045 -21.67373 -21.29890 -19.89772 -19.57612 -17.36551 -16.97538 -15.76957 -15.42394 -14.71543 -14.05811 -13.75177 -13.49318 -13.17448 -12.90886 -12.70425 -12.48502 -12.14424 -11.91976 -11.74508 -11.29791 -11.04377 -10.92411 -10.71801 -10.63220 -10.26923 -10.07415 -9.76424 -9.49427 -8.61192 -8.41504 -8.06660 -7.86628 -6.39555 -4.13723 1.49931 1.97503 2.91878 3.40542 3.42545 3.60792 3.85849 4.34615 4.51900 5.26898 5.28913 5.38362 5.42167 5.48507 5.67814 5.81088 5.91835 5.96156 6.02212 6.06843 6.19307 6.19746 6.35986 6.66808 6.75511 6.79535 7.11228 7.15407 7.36741 7.47967 7.63156 8.10948 8.34624 8.80330 9.58444 10.98699 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.018779 B = 0.007657 C = 0.006168 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1490.661977 B = 3655.993218 C = 4538.239591 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 N -0.522 5.522 3 C 0.038 3.962 4 C -0.123 4.123 5 C 0.051 3.949 6 H 0.033 0.967 7 C -0.598 4.598 8 H 0.052 0.948 9 C 0.024 3.976 10 N -0.908 5.908 11 Si 1.066 2.934 12 H -0.282 1.282 13 H -0.288 1.288 14 H -0.287 1.287 15 C 0.145 3.855 16 H 0.083 0.917 17 C 0.070 3.930 18 C -0.216 4.216 19 C -0.170 4.170 20 C 0.001 3.999 21 Cl 0.005 6.995 22 O -0.152 6.152 23 H 0.064 0.936 24 H 0.062 0.938 25 H 0.026 0.974 26 H 0.036 0.964 27 H 0.069 0.931 28 H 0.066 0.934 29 H 0.060 0.940 30 H 0.273 0.727 31 H 0.153 0.847 32 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.587 -6.040 -2.627 11.632 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.131 4.131 2 N -0.246 5.246 3 C -0.090 4.090 4 C -0.162 4.162 5 C 0.032 3.968 6 H 0.051 0.949 7 C -0.636 4.636 8 H 0.070 0.930 9 C -0.181 4.181 10 N -0.544 5.544 11 Si 0.894 3.106 12 H -0.207 1.207 13 H -0.214 1.214 14 H -0.214 1.214 15 C 0.037 3.963 16 H 0.101 0.899 17 C 0.018 3.982 18 C -0.236 4.236 19 C -0.190 4.190 20 C -0.075 4.075 21 Cl 0.034 6.966 22 O -0.049 6.049 23 H 0.083 0.917 24 H 0.080 0.920 25 H 0.044 0.956 26 H 0.055 0.945 27 H 0.088 0.912 28 H 0.085 0.915 29 H 0.079 0.921 30 H 0.085 0.915 31 H 0.170 0.830 32 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges -8.081 -5.861 -2.541 10.301 hybrid contribution -1.610 -0.322 -0.337 1.676 sum -9.691 -6.183 -2.878 11.850 Atomic orbital electron populations 1.22488 0.88832 1.01524 1.00257 1.64585 1.07164 1.15893 1.36921 1.22897 0.97409 0.88274 1.00411 1.22689 0.94528 1.00695 0.98290 1.19756 0.88436 0.90776 0.97868 0.94914 1.21854 1.05930 1.43345 0.92486 0.92969 1.25745 0.93409 0.93238 1.05692 1.70792 1.39531 1.41200 1.02864 0.83586 0.76375 0.76486 0.74180 1.20745 1.21436 1.21362 1.21609 1.00470 0.83273 0.90937 0.89920 1.22441 0.99566 0.94054 0.82128 1.21410 1.10622 0.90927 1.00644 1.21386 1.06783 0.99464 0.91402 1.22240 1.13043 0.81507 0.90756 1.98377 1.96224 1.42099 1.59905 1.84012 1.69880 1.15333 1.35659 0.91702 0.91953 0.95580 0.94522 0.91238 0.91506 0.92144 0.91486 0.82961 0.83006 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.28 9.29 60.06 0.56 0.83 16 2 N -0.52 -9.88 5.21 -232.22 -1.21 -11.09 16 3 C 0.04 0.69 6.70 -2.76 -0.02 0.68 16 4 C -0.12 -2.73 5.34 -25.38 -0.14 -2.86 16 5 C 0.05 1.23 2.05 -89.90 -0.18 1.05 16 6 H 0.03 0.90 7.99 -51.93 -0.41 0.48 16 7 C -0.60 -15.90 8.42 -34.44 -0.29 -16.19 16 8 H 0.05 1.36 7.78 -52.49 -0.41 0.96 16 9 C 0.02 0.67 5.33 -17.82 -0.10 0.57 16 10 N -0.91 -26.42 13.42 55.43 0.74 -25.68 16 11 Si 1.07 24.39 29.90 -169.99 -5.08 19.30 16 12 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 13 H -0.29 -6.26 7.11 56.52 0.40 -5.85 16 14 H -0.29 -6.36 7.11 56.52 0.40 -5.95 16 15 C 0.14 3.01 2.17 -66.94 -0.15 2.86 16 16 H 0.08 1.69 7.86 -51.93 -0.41 1.28 16 17 C 0.07 1.42 6.01 -35.63 -0.21 1.20 16 18 C -0.22 -3.94 10.81 -39.70 -0.43 -4.36 16 19 C -0.17 -2.79 10.88 -39.65 -0.43 -3.23 16 20 C 0.00 0.01 7.93 29.46 0.23 0.25 16 21 Cl 0.01 0.08 29.30 -51.86 -1.52 -1.44 16 22 O -0.15 -3.11 10.63 5.50 0.06 -3.05 16 23 H 0.06 0.88 8.14 -51.93 -0.42 0.45 16 24 H 0.06 0.94 8.01 -51.93 -0.42 0.53 16 25 H 0.03 0.38 8.00 -51.93 -0.42 -0.04 16 26 H 0.04 0.61 7.73 -51.93 -0.40 0.21 16 27 H 0.07 1.19 8.14 -51.93 -0.42 0.77 16 28 H 0.07 1.55 7.84 -51.93 -0.41 1.14 16 29 H 0.06 1.37 6.97 -51.93 -0.36 1.01 16 30 H 0.27 7.87 5.53 -40.82 -0.23 7.65 16 31 H 0.15 2.52 8.06 -52.48 -0.42 2.10 16 32 H 0.15 2.01 8.06 -52.49 -0.42 1.58 16 LS Contribution 284.84 15.07 4.29 4.29 Total: -1.00 -28.85 284.84 -7.82 -36.67 By element: Atomic # 1 Polarization: 4.14 SS G_CDS: -3.95 Total: 0.19 kcal Atomic # 6 Polarization: -18.05 SS G_CDS: -1.15 Total: -19.20 kcal Atomic # 7 Polarization: -36.30 SS G_CDS: -0.47 Total: -36.76 kcal Atomic # 8 Polarization: -3.11 SS G_CDS: 0.06 Total: -3.05 kcal Atomic # 14 Polarization: 24.39 SS G_CDS: -5.08 Total: 19.30 kcal Atomic # 17 Polarization: 0.08 SS G_CDS: -1.52 Total: -1.44 kcal Total LS contribution 4.29 Total: 4.29 kcal Total: -28.85 -7.82 -36.67 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260235451.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 51.229 kcal (2) G-P(sol) polarization free energy of solvation -28.850 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.379 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.815 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.666 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.564 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.53 seconds