Wall clock time and date at job start Mon Mar 30 2020 06:51:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42900 * 113.99942 * 2 1 4 4 C 1.50703 * 109.47005 * 180.02562 * 3 2 1 5 5 C 1.38244 * 120.00472 * 359.97438 * 4 3 2 6 6 C 1.38214 * 120.00884 * 180.02562 * 5 4 3 7 7 C 1.38264 * 120.03016 * 0.02562 * 6 5 4 8 8 C 1.50698 * 119.99602 * 179.97438 * 7 6 5 9 9 H 1.09000 * 109.47044 * 340.00622 * 8 7 6 10 10 N 1.46895 * 109.47470 * 220.00369 * 8 7 6 11 11 C 1.50703 * 109.46901 * 100.00097 * 8 7 6 12 12 H 1.07995 * 119.99888 * 5.59056 * 11 8 7 13 13 C 1.37877 * 119.99991 * 185.59418 * 11 8 7 14 14 N 1.31514 * 120.00089 * 194.83263 * 13 11 8 15 15 Si 1.86805 * 120.00050 * 14.83087 * 13 11 8 16 16 H 1.48497 * 109.47127 * 180.02562 * 15 13 11 17 17 H 1.48497 * 109.46946 * 60.00281 * 15 13 11 18 18 H 1.48499 * 109.46927 * 300.00097 * 15 13 11 19 19 C 1.38190 * 120.01346 * 0.27155 * 7 6 5 20 20 C 1.38330 * 120.00513 * 180.02562 * 4 3 2 21 21 Cl 1.73599 * 120.01429 * 359.95238 * 20 4 3 22 22 H 1.09000 * 109.47306 * 60.00327 * 1 2 3 23 23 H 1.08997 * 109.47076 * 180.02562 * 1 2 3 24 24 H 1.08998 * 109.47339 * 299.99962 * 1 2 3 25 25 H 1.08995 * 109.47110 * 59.99777 * 3 2 1 26 26 H 1.09003 * 109.46788 * 299.99835 * 3 2 1 27 27 H 1.08000 * 119.99362 * 0.02562 * 5 4 3 28 28 H 1.08001 * 119.98367 * 180.02562 * 6 5 4 29 29 H 1.00897 * 110.99831 * 179.21853 * 10 8 7 30 30 H 1.00904 * 110.99655 * 303.16356 * 10 8 7 31 31 H 0.96998 * 119.99633 * 354.89815 * 14 13 11 32 32 H 1.07993 * 120.01054 * 179.72489 * 19 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5126 1.1865 -0.0006 5 6 4.1072 -0.0616 -0.0006 6 6 5.4850 -0.1708 -0.0006 7 6 6.2694 0.9678 -0.0002 8 6 7.7716 0.8478 0.0003 9 1 8.0567 -0.1439 0.3517 10 7 8.3439 1.8661 0.8909 11 6 8.2924 1.0539 -1.3987 12 1 7.6158 1.3408 -2.1900 13 6 9.6328 0.8761 -1.6685 14 7 10.1428 1.3282 -2.7932 15 14 10.7244 -0.0070 -0.4364 16 1 12.1131 -0.0668 -0.9591 17 1 10.2155 -1.3856 -0.2232 18 1 10.7126 0.7300 0.8527 19 6 5.6761 2.2159 0.0059 20 6 4.2967 2.3260 -0.0002 21 17 3.5507 3.8935 -0.0002 22 1 -0.3634 0.5138 -0.8900 23 1 -0.3633 -1.0276 0.0005 24 1 -0.3634 0.5138 0.8900 25 1 1.6886 1.8464 0.8899 26 1 1.6886 1.8463 -0.8900 27 1 3.4950 -0.9513 -0.0005 28 1 5.9491 -1.1460 -0.0010 29 1 9.3502 1.7981 0.9184 30 1 8.0515 2.7921 0.6164 31 1 9.5637 1.7205 -3.4652 32 1 6.2889 3.1051 0.0108 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260297287.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:51:16 Heat of formation + Delta-G solvation = -34.834495 kcal Electronic energy + Delta-G solvation = -16394.134379 eV Core-core repulsion = 13573.189278 eV Total energy + Delta-G solvation = -2820.945101 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -39.36281 -37.68995 -36.30465 -34.89040 -32.15458 -30.82638 -30.24526 -27.36476 -26.16270 -24.89133 -22.27711 -21.90280 -19.77532 -17.75938 -16.73318 -16.44347 -15.96902 -15.49838 -14.72002 -14.54386 -14.02945 -13.61630 -13.43943 -13.30197 -12.91129 -12.40026 -12.29408 -12.10304 -11.73421 -11.36824 -11.09129 -10.99477 -10.78350 -10.47493 -10.16511 -10.07551 -9.88827 -9.36505 -8.55913 -8.34882 -8.15086 -7.56770 -6.54348 -4.30322 1.61666 1.81123 2.40427 3.24941 3.33184 3.49459 3.63465 4.13579 4.31503 4.91601 5.10881 5.16183 5.18921 5.27787 5.32803 5.45446 5.48267 5.57095 5.79526 5.88472 6.11725 6.18953 6.35989 6.63582 6.72964 6.75134 7.12162 7.26440 7.35651 7.73171 8.14386 8.30872 8.43968 8.76138 9.42761 10.75980 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.029516 B = 0.005630 C = 0.005131 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 948.405099 B = 4971.790383 C = 5455.857561 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.386 6.386 3 C 0.112 3.888 4 C -0.113 4.113 5 C -0.086 4.086 6 C -0.121 4.121 7 C -0.004 4.004 8 C 0.210 3.790 9 H 0.048 0.952 10 N -0.857 5.857 11 C -0.627 4.627 12 H 0.058 0.942 13 C 0.031 3.969 14 N -0.897 5.897 15 Si 1.048 2.952 16 H -0.283 1.283 17 H -0.281 1.281 18 H -0.272 1.272 19 C -0.099 4.099 20 C -0.028 4.028 21 Cl -0.088 7.088 22 H 0.041 0.959 23 H 0.086 0.914 24 H 0.040 0.960 25 H 0.061 0.939 26 H 0.061 0.939 27 H 0.133 0.867 28 H 0.125 0.875 29 H 0.333 0.667 30 H 0.325 0.675 31 H 0.270 0.730 32 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.028 -0.179 6.546 16.393 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.305 6.305 3 C 0.035 3.965 4 C -0.114 4.114 5 C -0.104 4.104 6 C -0.140 4.140 7 C -0.005 4.005 8 C 0.100 3.900 9 H 0.066 0.934 10 N -0.389 5.389 11 C -0.666 4.666 12 H 0.076 0.924 13 C -0.176 4.176 14 N -0.530 5.530 15 Si 0.876 3.124 16 H -0.209 1.209 17 H -0.207 1.207 18 H -0.199 1.199 19 C -0.118 4.118 20 C -0.055 4.055 21 Cl -0.060 7.060 22 H 0.059 0.941 23 H 0.104 0.896 24 H 0.059 0.941 25 H 0.079 0.921 26 H 0.079 0.921 27 H 0.151 0.849 28 H 0.143 0.857 29 H 0.148 0.852 30 H 0.137 0.863 31 H 0.080 0.920 32 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -13.814 -1.019 7.413 15.710 hybrid contribution -1.446 1.213 -1.423 2.364 sum -15.259 0.194 5.990 16.394 Atomic orbital electron populations 1.22727 0.81048 1.02717 0.99955 1.87852 1.19525 1.27658 1.95463 1.21148 0.90162 0.84520 1.00631 1.19197 0.93590 0.92511 1.06067 1.20804 0.94361 0.96420 0.98796 1.21160 0.93120 0.98907 1.00812 1.20137 0.97255 0.91470 0.91654 1.18361 0.86251 0.92869 0.92506 0.93442 1.59861 1.14752 1.07824 1.56432 1.22615 0.96154 1.53041 0.94836 0.92420 1.25874 0.96493 0.94751 1.00438 1.70845 1.38032 1.35612 1.08533 0.83947 0.76354 0.76983 0.75079 1.20911 1.20682 1.19867 1.20738 0.91218 0.98907 1.00948 1.20563 0.93053 0.84493 1.07345 1.98318 1.82788 1.27770 1.97102 0.94080 0.89579 0.94100 0.92088 0.92105 0.84891 0.85691 0.85242 0.86332 0.92020 0.85191 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.29 11.01 101.05 1.11 1.41 16 2 O -0.39 -5.10 9.18 -35.23 -0.32 -5.42 16 3 C 0.11 1.51 5.30 36.01 0.19 1.70 16 4 C -0.11 -1.86 5.88 -104.58 -0.62 -2.47 16 5 C -0.09 -1.45 9.38 -39.59 -0.37 -1.82 16 6 C -0.12 -2.28 9.67 -39.58 -0.38 -2.67 16 7 C 0.00 -0.09 4.90 -104.63 -0.51 -0.60 16 8 C 0.21 4.83 2.49 -70.02 -0.17 4.66 16 9 H 0.05 1.11 6.71 -51.93 -0.35 0.76 16 10 N -0.86 -18.43 9.09 -6.65 -0.06 -18.49 16 11 C -0.63 -16.86 9.04 -34.44 -0.31 -17.18 16 12 H 0.06 1.72 7.99 -52.49 -0.42 1.30 16 13 C 0.03 0.86 5.41 -17.82 -0.10 0.76 16 14 N -0.90 -26.59 13.70 55.43 0.76 -25.83 16 15 Si 1.05 23.88 26.42 -169.99 -4.49 19.39 16 16 H -0.28 -6.57 7.11 56.52 0.40 -6.17 16 17 H -0.28 -6.16 7.11 56.52 0.40 -5.75 16 18 H -0.27 -5.64 5.62 56.52 0.32 -5.32 16 19 C -0.10 -1.93 9.06 -39.55 -0.36 -2.29 16 20 C -0.03 -0.49 6.31 -39.50 -0.25 -0.74 16 21 Cl -0.09 -1.32 27.99 -51.86 -1.45 -2.77 16 22 H 0.04 0.33 8.14 -51.93 -0.42 -0.09 16 23 H 0.09 0.65 8.14 -51.93 -0.42 0.22 16 24 H 0.04 0.32 8.14 -51.93 -0.42 -0.10 16 25 H 0.06 0.76 8.14 -51.93 -0.42 0.33 16 26 H 0.06 0.78 8.14 -51.93 -0.42 0.36 16 27 H 0.13 2.03 7.01 -52.49 -0.37 1.66 16 28 H 0.13 2.18 8.04 -52.49 -0.42 1.76 16 29 H 0.33 7.22 5.48 -39.29 -0.22 7.00 16 30 H 0.32 6.73 7.22 -39.29 -0.28 6.45 16 31 H 0.27 8.04 8.73 -40.82 -0.36 7.69 16 32 H 0.13 2.52 6.60 -52.49 -0.35 2.17 16 LS Contribution 283.12 15.07 4.27 4.27 Total: -1.00 -29.02 283.12 -6.82 -35.84 By element: Atomic # 1 Polarization: 16.02 SS G_CDS: -3.75 Total: 12.27 kcal Atomic # 6 Polarization: -17.48 SS G_CDS: -1.77 Total: -19.24 kcal Atomic # 7 Polarization: -45.02 SS G_CDS: 0.70 Total: -44.33 kcal Atomic # 8 Polarization: -5.10 SS G_CDS: -0.32 Total: -5.42 kcal Atomic # 14 Polarization: 23.88 SS G_CDS: -4.49 Total: 19.39 kcal Atomic # 17 Polarization: -1.32 SS G_CDS: -1.45 Total: -2.77 kcal Total LS contribution 4.27 Total: 4.27 kcal Total: -29.02 -6.82 -35.84 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260297287.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.009 kcal (2) G-P(sol) polarization free energy of solvation -29.023 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.014 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.820 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.844 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.834 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds