Wall clock time and date at job start Mon Mar 30 2020 06:47:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46893 * 1 3 3 C 1.46895 * 111.00207 * 2 1 4 4 H 1.09000 * 109.47775 * 182.98799 * 3 2 1 5 5 C 1.50699 * 109.47135 * 302.99019 * 3 2 1 6 6 H 1.08004 * 119.99914 * 118.59477 * 5 3 2 7 7 C 1.37883 * 120.00086 * 298.59262 * 5 3 2 8 8 N 1.31509 * 119.99798 * 0.02562 * 7 5 3 9 9 Si 1.86803 * 120.00064 * 179.97438 * 7 5 3 10 10 H 1.48503 * 109.46756 * 90.00163 * 9 7 5 11 11 H 1.48494 * 109.46929 * 210.00383 * 9 7 5 12 12 H 1.48500 * 109.46861 * 330.00516 * 9 7 5 13 13 C 1.50702 * 109.47072 * 62.98914 * 3 2 1 14 14 C 1.38195 * 120.01961 * 258.66568 * 13 3 2 15 15 C 1.38236 * 120.07708 * 179.74413 * 14 13 3 16 16 C 1.38294 * 120.11513 * 359.97438 * 15 14 13 17 17 C 1.38208 * 120.04530 * 359.97438 * 16 15 14 18 18 Cl 1.73605 * 120.04007 * 180.02562 * 17 16 15 19 19 C 1.38660 * 120.02226 * 78.38863 * 13 3 2 20 20 O 1.35924 * 120.06098 * 0.25349 * 19 13 3 21 21 C 1.42907 * 117.00181 * 89.99872 * 20 19 13 22 22 H 1.09003 * 109.47339 * 175.92436 * 1 2 3 23 23 H 1.08991 * 109.47104 * 295.92104 * 1 2 3 24 24 H 1.08998 * 109.47278 * 55.92674 * 1 2 3 25 25 H 1.00903 * 111.00249 * 236.04637 * 2 1 3 26 26 H 0.96998 * 120.00001 * 179.97438 * 8 7 5 27 27 H 1.08000 * 119.96451 * 359.72101 * 14 13 3 28 28 H 1.07994 * 119.94194 * 179.97438 * 15 14 13 29 29 H 1.08000 * 119.97450 * 179.97438 * 16 15 14 30 30 H 1.09001 * 109.46835 * 300.00561 * 21 20 19 31 31 H 1.09001 * 109.46724 * 60.00044 * 21 20 19 32 32 H 1.08995 * 109.47441 * 180.02562 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4689 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 1 3.0837 1.3429 -0.0536 5 6 1.4532 2.1176 -1.1917 6 1 0.8430 2.9968 -1.0464 7 6 1.7362 1.6780 -2.4676 8 7 2.4789 0.6072 -2.6445 9 14 1.0635 2.6026 -3.9448 10 1 2.0334 3.6487 -4.3576 11 1 0.8507 1.6541 -5.0674 12 1 -0.2281 3.2400 -3.5835 13 6 1.5730 2.0716 1.2658 14 6 0.5161 2.9617 1.2439 15 6 0.1243 3.6007 2.4054 16 6 0.7881 3.3508 3.5926 17 6 1.8451 2.4608 3.6204 18 17 2.6779 2.1468 5.1109 19 6 2.2409 1.8189 2.4544 20 8 3.2804 0.9434 2.4785 21 6 4.5841 1.4774 2.2386 22 1 -0.3634 -1.0251 -0.0730 23 1 -0.3633 0.4492 0.9242 24 1 -0.3634 0.5757 -0.8512 25 1 1.8306 -0.5261 -0.7814 26 1 2.6777 0.2977 -3.5420 27 1 -0.0041 3.1586 0.3182 28 1 -0.7017 4.2961 2.3857 29 1 0.4804 3.8516 4.4987 30 1 4.6119 1.9382 1.2512 31 1 4.8146 2.2268 2.9959 32 1 5.3198 0.6747 2.2855 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260349060.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:47:24 Heat of formation + Delta-G solvation = -13.879013 kcal Electronic energy + Delta-G solvation = -17298.954388 eV Core-core repulsion = 14478.917985 eV Total energy + Delta-G solvation = -2820.036403 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -39.60199 -36.79216 -36.27154 -35.24381 -31.87338 -30.36344 -29.63603 -26.96588 -26.07107 -24.51148 -22.57437 -21.74034 -19.87604 -17.25476 -16.64831 -15.74925 -15.46649 -15.04645 -14.74457 -14.21342 -13.93376 -13.35120 -13.18009 -12.77248 -12.56156 -12.32703 -11.84321 -11.65866 -11.22478 -11.03814 -10.91461 -10.84313 -10.64061 -10.42708 -10.37935 -9.94106 -9.51479 -9.23487 -8.66716 -8.11380 -8.03854 -6.99259 -6.13340 -4.31289 1.60313 1.78101 2.52106 3.17682 3.25815 3.27293 3.95357 4.25971 4.44740 5.08787 5.25792 5.49681 5.70179 5.76458 5.85159 5.91363 5.95224 6.13306 6.21822 6.36477 6.53617 6.64080 6.80966 6.89385 7.01559 7.12406 7.23988 7.53621 7.68212 8.03188 8.08898 8.55902 8.78032 9.03747 9.40051 10.83306 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.029350 B = 0.007215 C = 0.006616 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 953.758222 B = 3879.680351 C = 4231.366151 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.041 3.959 2 N -0.680 5.680 3 C 0.245 3.755 4 H 0.052 0.948 5 C -0.552 4.552 6 H 0.064 0.936 7 C 0.070 3.930 8 N -0.889 5.889 9 Si 0.893 3.107 10 H -0.279 1.279 11 H -0.285 1.285 12 H -0.273 1.273 13 C -0.040 4.040 14 C -0.094 4.094 15 C -0.127 4.127 16 C -0.123 4.123 17 C -0.063 4.063 18 Cl -0.082 7.082 19 C 0.109 3.891 20 O -0.314 6.314 21 C 0.038 3.962 22 H 0.033 0.967 23 H 0.037 0.963 24 H 0.030 0.970 25 H 0.356 0.644 26 H 0.266 0.734 27 H 0.143 0.857 28 H 0.124 0.876 29 H 0.125 0.875 30 H 0.050 0.950 31 H 0.037 0.963 32 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.814 3.885 8.871 9.719 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 N -0.313 5.313 3 C 0.137 3.863 4 H 0.070 0.930 5 C -0.591 4.591 6 H 0.082 0.918 7 C -0.133 4.133 8 N -0.528 5.528 9 Si 0.720 3.280 10 H -0.205 1.205 11 H -0.211 1.211 12 H -0.198 1.198 13 C -0.041 4.041 14 C -0.112 4.112 15 C -0.145 4.145 16 C -0.142 4.142 17 C -0.090 4.090 18 Cl -0.053 7.053 19 C 0.064 3.936 20 O -0.230 6.230 21 C -0.056 4.056 22 H 0.052 0.948 23 H 0.056 0.944 24 H 0.049 0.951 25 H 0.177 0.823 26 H 0.076 0.924 27 H 0.160 0.840 28 H 0.142 0.858 29 H 0.143 0.857 30 H 0.069 0.931 31 H 0.055 0.945 32 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -0.592 3.440 9.570 10.187 hybrid contribution -0.413 0.995 -1.687 2.001 sum -1.005 4.435 7.884 9.101 Atomic orbital electron populations 1.21883 0.91298 0.98298 0.99471 1.60951 1.05646 1.14920 1.49740 1.17960 0.96134 0.85889 0.86275 0.93028 1.21917 1.33114 1.12814 0.91249 0.91848 1.24994 0.94387 0.94950 0.99014 1.69757 1.37127 1.23206 1.22677 0.86576 0.79441 0.79696 0.82252 1.20517 1.21112 1.19826 1.20836 0.93859 0.94303 0.95144 1.21520 0.96164 0.95130 0.98432 1.21108 1.00221 1.00900 0.92286 1.20744 0.95829 0.98732 0.98870 1.21359 0.99005 1.01643 0.86975 1.98313 1.78251 1.95251 1.33509 1.18399 0.91979 0.92506 0.90685 1.86083 1.13398 1.32069 1.91441 1.22908 0.83059 0.99603 1.00056 0.94826 0.94368 0.95137 0.82329 0.92390 0.83996 0.85847 0.85745 0.93103 0.94455 0.89264 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.90 9.98 60.06 0.60 1.50 16 2 N -0.68 -16.27 6.74 -116.51 -0.78 -17.06 16 3 C 0.25 5.90 2.32 -70.02 -0.16 5.74 16 4 H 0.05 1.36 6.63 -51.93 -0.34 1.02 16 5 C -0.55 -13.89 6.52 -34.44 -0.22 -14.12 16 6 H 0.06 1.56 5.37 -52.48 -0.28 1.27 16 7 C 0.07 1.79 5.39 -17.82 -0.10 1.70 16 8 N -0.89 -23.67 11.67 55.43 0.65 -23.02 16 9 Si 0.89 20.11 29.54 -169.99 -5.02 15.09 16 10 H -0.28 -6.30 7.11 56.52 0.40 -5.90 16 11 H -0.29 -6.46 7.11 56.52 0.40 -6.06 16 12 H -0.27 -6.08 7.11 56.52 0.40 -5.68 16 13 C -0.04 -0.85 4.32 -104.48 -0.45 -1.30 16 14 C -0.09 -1.80 8.29 -39.60 -0.33 -2.12 16 15 C -0.13 -2.02 10.04 -39.56 -0.40 -2.42 16 16 C -0.12 -1.93 9.83 -39.57 -0.39 -2.32 16 17 C -0.06 -1.11 6.33 -39.36 -0.25 -1.36 16 18 Cl -0.08 -1.29 28.51 -51.86 -1.48 -2.77 16 19 C 0.11 2.20 5.69 -39.20 -0.22 1.98 16 20 O -0.31 -6.32 9.22 -19.50 -0.18 -6.50 16 21 C 0.04 0.64 10.86 101.05 1.10 1.73 16 22 H 0.03 0.67 8.14 -51.93 -0.42 0.25 16 23 H 0.04 0.81 6.89 -51.93 -0.36 0.45 16 24 H 0.03 0.70 6.85 -51.93 -0.36 0.35 16 25 H 0.36 9.07 7.10 -39.29 -0.28 8.80 16 26 H 0.27 6.81 8.31 -40.82 -0.34 6.47 16 27 H 0.14 2.77 5.73 -52.49 -0.30 2.47 16 28 H 0.12 1.57 8.06 -52.49 -0.42 1.15 16 29 H 0.12 1.62 8.06 -52.49 -0.42 1.19 16 30 H 0.05 0.90 7.13 -51.93 -0.37 0.53 16 31 H 0.04 0.56 8.14 -51.93 -0.42 0.14 16 32 H 0.09 1.28 8.14 -51.93 -0.42 0.85 16 LS Contribution 281.09 15.07 4.24 4.24 Total: -1.00 -26.79 281.09 -6.94 -33.73 By element: Atomic # 1 Polarization: 10.83 SS G_CDS: -3.54 Total: 7.29 kcal Atomic # 6 Polarization: -10.17 SS G_CDS: -0.82 Total: -11.00 kcal Atomic # 7 Polarization: -39.94 SS G_CDS: -0.14 Total: -40.08 kcal Atomic # 8 Polarization: -6.32 SS G_CDS: -0.18 Total: -6.50 kcal Atomic # 14 Polarization: 20.11 SS G_CDS: -5.02 Total: 15.09 kcal Atomic # 17 Polarization: -1.29 SS G_CDS: -1.48 Total: -2.77 kcal Total LS contribution 4.24 Total: 4.24 kcal Total: -26.79 -6.94 -33.73 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260349060.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.852 kcal (2) G-P(sol) polarization free energy of solvation -26.788 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.936 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.943 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.731 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.879 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds