Wall clock time and date at job start Mon Mar 30 2020 06:49:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35901 * 117.00099 * 2 1 4 4 C 1.38735 * 120.04712 * 0.02562 * 3 2 1 5 5 C 1.38231 * 119.93413 * 180.02562 * 4 3 2 6 6 Cl 1.73596 * 119.98774 * 180.02562 * 5 4 3 7 7 C 1.38409 * 120.02624 * 0.02562 * 5 4 3 8 8 C 1.38227 * 120.10036 * 359.95643 * 7 5 4 9 9 C 1.50705 * 119.96530 * 180.02562 * 8 7 5 10 10 H 1.09000 * 109.46700 * 200.02045 * 9 8 7 11 11 N 1.46899 * 109.46892 * 320.02074 * 9 8 7 12 12 C 1.52995 * 109.46906 * 80.01943 * 9 8 7 13 13 C 1.50700 * 109.46778 * 174.99907 * 12 9 8 14 14 H 1.07994 * 120.00410 * 359.97438 * 13 12 9 15 15 C 1.37885 * 119.99966 * 180.02562 * 13 12 9 16 16 N 1.31515 * 119.99816 * 180.02562 * 15 13 12 17 17 Si 1.86802 * 119.99906 * 359.97438 * 15 13 12 18 18 H 1.48503 * 109.46928 * 90.00140 * 17 15 13 19 19 H 1.48497 * 109.47015 * 209.99856 * 17 15 13 20 20 H 1.48500 * 109.47106 * 330.00121 * 17 15 13 21 21 C 1.38172 * 120.06671 * 0.04130 * 8 7 5 22 22 H 1.08993 * 109.47474 * 59.99823 * 1 2 3 23 23 H 1.08998 * 109.46938 * 179.97438 * 1 2 3 24 24 H 1.09007 * 109.46954 * 299.99212 * 1 2 3 25 25 H 1.08007 * 120.03167 * 359.74948 * 4 3 2 26 26 H 1.08002 * 119.95275 * 179.97438 * 7 5 4 27 27 H 1.00901 * 111.00077 * 296.04088 * 11 9 8 28 28 H 1.00891 * 111.00292 * 60.00041 * 11 9 8 29 29 H 1.09001 * 109.47381 * 295.00001 * 12 9 8 30 30 H 1.08996 * 109.47324 * 55.00054 * 12 9 8 31 31 H 0.97005 * 119.99672 * 180.02562 * 16 15 13 32 32 H 1.07995 * 120.01236 * 179.97438 * 21 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 1.2914 2.3750 0.0005 5 6 1.9214 3.6054 0.0000 6 17 0.9785 5.0630 0.0013 7 6 3.3037 3.6758 -0.0016 8 6 4.0568 2.5167 -0.0018 9 6 5.5617 2.5968 -0.0029 10 1 5.9755 1.6517 -0.3548 11 7 5.9935 3.6823 -0.8935 12 6 6.0587 2.8740 1.4172 13 6 7.5650 2.8324 1.4393 14 1 8.1129 2.6281 0.5314 15 6 8.2436 3.0540 2.6190 16 7 9.5581 3.0181 2.6381 17 14 7.2958 3.4065 4.1896 18 1 7.0021 2.1292 4.8878 19 1 8.1101 4.2782 5.0741 20 1 6.0217 4.0924 3.8556 21 6 3.4312 1.2847 -0.0012 22 1 -0.3634 0.5138 -0.8899 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5137 0.8901 25 1 0.2127 2.3200 -0.0031 26 1 3.7947 4.6377 -0.0024 27 1 5.7332 3.4909 -1.8494 28 1 5.6226 4.5695 -0.5884 29 1 5.7177 3.8591 1.7357 30 1 5.6643 2.1166 2.0946 31 1 10.0354 3.1737 3.4681 32 1 4.0204 0.3796 -0.0017 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260402527.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:49:23 Heat of formation + Delta-G solvation = -24.705446 kcal Electronic energy + Delta-G solvation = -16375.718570 eV Core-core repulsion = 13555.212698 eV Total energy + Delta-G solvation = -2820.505872 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -40.30604 -38.14931 -36.69002 -34.95326 -32.36734 -30.78548 -29.62774 -28.89838 -27.47930 -24.44013 -22.62767 -21.82691 -19.87298 -17.93352 -16.61118 -16.55272 -16.14654 -15.91046 -15.28574 -14.67506 -14.38515 -13.93203 -13.64419 -13.43027 -13.09491 -12.46853 -12.28692 -12.02575 -11.92698 -11.46644 -11.31240 -11.08117 -11.04905 -10.83883 -10.41790 -10.00667 -9.72842 -9.12941 -8.64276 -8.45904 -8.29985 -8.05034 -5.93970 -3.89381 1.14753 1.32444 2.02770 3.11023 3.34955 3.42866 3.45875 3.62188 4.52070 4.70453 4.78845 4.92981 5.01138 5.06279 5.20045 5.26032 5.36462 5.43262 5.47124 5.63165 6.04388 6.11316 6.17459 6.43216 6.52959 6.69268 7.06183 7.23064 7.29303 7.74965 7.90153 8.05539 8.66662 9.18325 9.68063 11.19659 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.021096 B = 0.005901 C = 0.005435 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1326.949633 B = 4743.508735 C = 5150.398233 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.313 6.313 3 C 0.139 3.861 4 C -0.215 4.215 5 C 0.008 3.992 6 Cl -0.075 7.075 7 C -0.147 4.147 8 C -0.051 4.051 9 C 0.142 3.858 10 H 0.090 0.910 11 N -0.816 5.816 12 C 0.000 4.000 13 C -0.495 4.495 14 H 0.082 0.918 15 C 0.064 3.936 16 N -0.905 5.905 17 Si 0.871 3.129 18 H -0.279 1.279 19 H -0.289 1.289 20 H -0.268 1.268 21 C -0.141 4.141 22 H 0.055 0.945 23 H 0.100 0.900 24 H 0.055 0.945 25 H 0.134 0.866 26 H 0.133 0.867 27 H 0.327 0.673 28 H 0.335 0.665 29 H 0.017 0.983 30 H 0.017 0.983 31 H 0.261 0.739 32 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -20.143 -1.748 -6.469 21.228 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.226 6.226 3 C 0.094 3.906 4 C -0.235 4.235 5 C -0.019 4.019 6 Cl -0.046 7.046 7 C -0.166 4.166 8 C -0.054 4.054 9 C 0.030 3.970 10 H 0.108 0.892 11 N -0.343 5.343 12 C -0.038 4.038 13 C -0.534 4.534 14 H 0.100 0.900 15 C -0.136 4.136 16 N -0.545 5.545 17 Si 0.699 3.301 18 H -0.205 1.205 19 H -0.215 1.215 20 H -0.192 1.192 21 C -0.160 4.160 22 H 0.073 0.927 23 H 0.118 0.882 24 H 0.074 0.926 25 H 0.152 0.848 26 H 0.151 0.849 27 H 0.138 0.862 28 H 0.148 0.852 29 H 0.035 0.965 30 H 0.035 0.965 31 H 0.071 0.929 32 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -19.224 -1.963 -6.120 20.270 hybrid contribution -1.944 0.631 0.840 2.210 sum -21.168 -1.332 -5.280 21.857 Atomic orbital electron populations 1.23068 0.78505 1.03949 1.01386 1.86111 1.21301 1.26486 1.88695 1.18853 0.92134 0.83628 0.96025 1.20927 1.00245 0.90728 1.11599 1.20556 0.91702 0.86795 1.02837 1.98358 1.72869 1.36503 1.96886 1.20817 0.91137 0.99690 1.04974 1.21302 0.99775 0.91214 0.93149 1.20657 0.83411 0.95909 0.96994 0.89183 1.58789 1.66863 1.04317 1.04348 1.19639 0.98146 0.96438 0.89581 1.21001 0.88675 1.47065 0.96616 0.90029 1.24987 0.94675 0.95354 0.98575 1.69905 1.06454 1.51044 1.27056 0.86923 0.80424 0.78573 0.84184 1.20475 1.21470 1.19250 1.20518 0.90949 0.98977 1.05592 0.92669 0.88162 0.92598 0.84849 0.84896 0.86163 0.85160 0.96464 0.96519 0.92937 0.84336 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.21 9.81 101.05 0.99 1.20 16 2 O -0.31 -3.94 10.50 -19.43 -0.20 -4.14 16 3 C 0.14 1.94 6.69 -39.22 -0.26 1.67 16 4 C -0.22 -2.78 8.82 -39.40 -0.35 -3.13 16 5 C 0.01 0.11 6.32 -39.52 -0.25 -0.14 16 6 Cl -0.08 -0.93 28.95 -51.86 -1.50 -2.43 16 7 C -0.15 -2.22 9.08 -39.52 -0.36 -2.58 16 8 C -0.05 -0.83 4.94 -104.65 -0.52 -1.35 16 9 C 0.14 2.67 2.93 -68.86 -0.20 2.47 16 10 H 0.09 1.72 8.00 -51.93 -0.42 1.31 16 11 N -0.82 -14.31 8.77 -5.65 -0.05 -14.36 16 12 C 0.00 -0.01 3.67 -27.89 -0.10 -0.11 16 13 C -0.50 -13.92 9.39 -34.44 -0.32 -14.24 16 14 H 0.08 2.50 7.99 -52.49 -0.42 2.08 16 15 C 0.06 1.88 5.47 -17.82 -0.10 1.78 16 16 N -0.90 -28.11 13.96 55.43 0.77 -27.34 16 17 Si 0.87 21.90 27.47 -169.99 -4.67 17.23 16 18 H -0.28 -6.91 7.11 56.52 0.40 -6.51 16 19 H -0.29 -7.23 7.11 56.52 0.40 -6.83 16 20 H -0.27 -6.50 6.54 56.52 0.37 -6.13 16 21 C -0.14 -2.15 9.61 -39.43 -0.38 -2.53 16 22 H 0.05 0.39 7.66 -51.93 -0.40 -0.01 16 23 H 0.10 0.59 8.14 -51.93 -0.42 0.17 16 24 H 0.06 0.42 7.66 -51.93 -0.40 0.02 16 25 H 0.13 1.40 6.30 -52.48 -0.33 1.07 16 26 H 0.13 1.93 6.66 -52.49 -0.35 1.58 16 27 H 0.33 4.80 9.06 -39.29 -0.36 4.44 16 28 H 0.33 5.51 7.34 -39.30 -0.29 5.23 16 29 H 0.02 0.41 7.20 -51.93 -0.37 0.03 16 30 H 0.02 0.39 7.57 -51.93 -0.39 0.00 16 31 H 0.26 7.62 8.31 -40.82 -0.34 7.28 16 32 H 0.14 2.01 8.03 -52.49 -0.42 1.59 16 LS Contribution 287.05 15.07 4.33 4.33 Total: -1.00 -31.43 287.05 -6.91 -38.34 By element: Atomic # 1 Polarization: 9.06 SS G_CDS: -3.73 Total: 5.33 kcal Atomic # 6 Polarization: -15.12 SS G_CDS: -1.85 Total: -16.96 kcal Atomic # 7 Polarization: -42.42 SS G_CDS: 0.72 Total: -41.69 kcal Atomic # 8 Polarization: -3.94 SS G_CDS: -0.20 Total: -4.14 kcal Atomic # 14 Polarization: 21.90 SS G_CDS: -4.67 Total: 17.23 kcal Atomic # 17 Polarization: -0.93 SS G_CDS: -1.50 Total: -2.43 kcal Total LS contribution 4.33 Total: 4.33 kcal Total: -31.43 -6.91 -38.34 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260402527.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.634 kcal (2) G-P(sol) polarization free energy of solvation -31.434 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.800 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.905 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.339 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.705 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds