Wall clock time and date at job start Mon Mar 30 2020 06:04:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 C 1.38190 * 120.02527 * 2 1 4 4 C 1.38229 * 120.08230 * 179.97438 * 3 2 1 5 5 C 1.38298 * 120.11619 * 0.02562 * 4 3 2 6 6 C 1.50695 * 119.97868 * 179.97438 * 5 4 3 7 7 H 1.09001 * 109.47521 * 179.97438 * 6 5 4 8 8 C 1.50707 * 109.47151 * 59.99939 * 6 5 4 9 9 H 1.08002 * 120.00013 * 269.29162 * 8 6 5 10 10 C 1.37879 * 119.99636 * 89.29494 * 8 6 5 11 11 N 1.31511 * 120.00305 * 7.06848 * 10 8 6 12 12 Si 1.86800 * 119.99498 * 187.06822 * 10 8 6 13 13 H 1.48507 * 109.47097 * 60.00030 * 12 10 8 14 14 H 1.48499 * 109.47050 * 179.97438 * 12 10 8 15 15 H 1.48498 * 109.47295 * 299.99757 * 12 10 8 16 16 C 1.53001 * 109.47378 * 300.00160 * 6 5 4 17 17 N 1.46895 * 109.47474 * 185.33929 * 16 6 5 18 18 C 1.38211 * 120.04007 * 359.72420 * 5 4 3 19 19 Cl 1.73603 * 120.03753 * 180.29690 * 18 5 4 20 20 C 1.38667 * 120.01996 * 179.97438 * 2 1 3 21 21 O 1.35926 * 120.06054 * 0.02562 * 20 2 1 22 22 H 1.09003 * 109.47525 * 270.01648 * 1 2 3 23 23 H 1.09004 * 109.46900 * 30.01901 * 1 2 3 24 24 H 1.09000 * 109.47356 * 150.01645 * 1 2 3 25 25 H 1.08001 * 119.95912 * 359.97438 * 3 2 1 26 26 H 1.07994 * 119.94836 * 180.02562 * 4 3 2 27 27 H 0.96998 * 120.00115 * 180.02562 * 11 10 8 28 28 H 1.09008 * 109.46776 * 305.34340 * 16 6 5 29 29 H 1.09004 * 109.47001 * 65.33775 * 16 6 5 30 30 H 1.00904 * 111.00046 * 56.04648 * 17 16 6 31 31 H 1.00896 * 111.00162 * 179.97438 * 17 16 6 32 32 H 0.96703 * 114.00006 * 89.99736 * 21 20 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1984 1.1965 0.0000 4 6 3.5807 1.1978 0.0005 5 6 4.2758 0.0022 0.0005 6 6 5.7828 0.0073 0.0005 7 1 6.1497 -1.0191 0.0010 8 6 6.2827 0.7195 1.2310 9 1 6.4700 1.7827 1.2010 10 6 6.5010 0.0136 2.3951 11 7 6.4078 -1.2982 2.3960 12 14 6.9293 0.9207 3.9709 13 1 5.8288 1.8551 4.3190 14 1 7.1129 -0.0590 5.0717 15 1 8.1861 1.6870 3.7751 16 6 6.2904 0.7303 -1.2487 17 7 7.7540 0.6247 -1.3149 18 6 3.5892 -1.1973 0.0058 19 17 4.4619 -2.6980 0.0136 20 6 2.2007 -1.2006 0.0005 21 8 1.5227 -2.3788 0.0005 22 1 -0.3634 0.0003 1.0277 23 1 -0.3633 0.8899 -0.5142 24 1 -0.3634 -0.8901 -0.5136 25 1 1.6582 2.1316 -0.0004 26 1 4.1189 2.1341 0.0010 27 1 6.5610 -1.7948 3.2151 28 1 5.8525 0.2732 -2.1361 29 1 6.0036 1.7810 -1.2021 30 1 8.0483 -0.3402 -1.2939 31 1 8.1139 1.0944 -2.1321 32 1 1.3268 -2.7198 -0.8829 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260528578.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:04:39 Heat of formation + Delta-G solvation = -35.005030 kcal Electronic energy + Delta-G solvation = -17059.818755 eV Core-core repulsion = 14238.866260 eV Total energy + Delta-G solvation = -2820.952496 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -39.40135 -36.71132 -35.47566 -34.80912 -32.32813 -31.82422 -29.10926 -28.68800 -25.40396 -24.00479 -22.10617 -21.31217 -19.73576 -17.50007 -16.41442 -15.59744 -15.47992 -14.85325 -14.63329 -14.23734 -13.61332 -13.44592 -13.04682 -12.71116 -12.28989 -12.14332 -12.06911 -11.67749 -11.36173 -11.00070 -10.75575 -10.71107 -10.47890 -10.38044 -10.26857 -9.67262 -9.38729 -8.95541 -8.32549 -7.86871 -7.75114 -7.55534 -5.91987 -3.91868 1.81735 1.96595 3.15080 3.39578 3.43743 3.46439 4.24450 4.51752 4.62886 5.22616 5.35267 5.44739 5.57659 5.71521 5.84607 5.98965 6.07430 6.12672 6.24084 6.34026 6.42513 6.65608 6.81834 6.93281 7.12241 7.16693 7.47968 7.82898 7.98308 8.03254 8.05986 8.29186 8.43582 9.09018 9.67033 11.14701 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.018717 B = 0.008721 C = 0.008445 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1495.624398 B = 3210.005750 C = 3314.717235 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C -0.137 4.137 3 C -0.113 4.113 4 C -0.109 4.109 5 C -0.008 4.008 6 C 0.055 3.945 7 H 0.083 0.917 8 C -0.485 4.485 9 H 0.056 0.944 10 C 0.068 3.932 11 N -0.872 5.872 12 Si 0.886 3.114 13 H -0.279 1.279 14 H -0.290 1.290 15 H -0.277 1.277 16 C 0.082 3.918 17 N -0.831 5.831 18 C -0.056 4.056 19 Cl -0.052 7.052 20 C 0.098 3.902 21 O -0.488 6.488 22 H 0.063 0.937 23 H 0.059 0.941 24 H 0.060 0.940 25 H 0.118 0.882 26 H 0.126 0.874 27 H 0.260 0.740 28 H -0.006 1.006 29 H 0.054 0.946 30 H 0.336 0.664 31 H 0.319 0.681 32 H 0.377 0.623 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.833 0.805 -8.098 11.295 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C -0.138 4.138 3 C -0.132 4.132 4 C -0.128 4.128 5 C -0.010 4.010 6 C 0.036 3.964 7 H 0.101 0.899 8 C -0.522 4.522 9 H 0.074 0.926 10 C -0.136 4.136 11 N -0.508 5.508 12 Si 0.714 3.286 13 H -0.205 1.205 14 H -0.216 1.216 15 H -0.203 1.203 16 C -0.049 4.049 17 N -0.358 5.358 18 C -0.083 4.083 19 Cl -0.023 7.023 20 C 0.053 3.947 21 O -0.297 6.297 22 H 0.082 0.918 23 H 0.078 0.922 24 H 0.079 0.921 25 H 0.136 0.864 26 H 0.144 0.856 27 H 0.069 0.931 28 H 0.012 0.988 29 H 0.073 0.927 30 H 0.148 0.852 31 H 0.130 0.870 32 H 0.232 0.768 Dipole moment (debyes) X Y Z Total from point charges -7.706 0.948 -6.655 10.226 hybrid contribution 0.030 -0.238 -0.236 0.336 sum -7.676 0.710 -6.891 10.339 Atomic orbital electron populations 1.20502 0.91233 1.01650 1.01862 1.19803 0.95910 0.92131 1.05953 1.20868 0.94417 0.96506 1.01374 1.20959 0.92966 0.98261 1.00600 1.20684 0.99866 0.89640 0.90839 1.18236 0.84784 1.00542 0.92865 0.89913 1.20667 1.43090 0.94453 0.94039 0.92597 1.24957 0.95006 0.94796 0.98838 1.69951 1.48260 1.05156 1.27435 0.86755 0.78831 0.79583 0.83395 1.20513 1.21559 1.20292 1.21818 0.87166 0.99637 0.96283 1.58482 1.11186 1.20415 1.45729 1.21262 0.90554 0.88871 1.07641 1.98324 1.76128 1.31140 1.96701 1.17987 0.88053 0.85077 1.03580 1.84865 1.76268 1.36120 1.32421 0.91784 0.92236 0.92101 0.86446 0.85620 0.93050 0.98788 0.92706 0.85158 0.87040 0.76827 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.26 9.79 36.00 0.35 -0.91 16 2 C -0.14 -2.34 5.89 -104.48 -0.62 -2.95 16 3 C -0.11 -1.95 9.70 -39.60 -0.38 -2.33 16 4 C -0.11 -2.16 8.87 -39.56 -0.35 -2.51 16 5 C -0.01 -0.18 4.77 -104.61 -0.50 -0.68 16 6 C 0.05 1.29 2.08 -92.92 -0.19 1.09 16 7 H 0.08 2.13 5.40 -51.93 -0.28 1.85 16 8 C -0.48 -12.82 7.66 -34.44 -0.26 -13.08 16 9 H 0.06 1.50 7.82 -52.49 -0.41 1.09 16 10 C 0.07 1.85 5.45 -17.82 -0.10 1.75 16 11 N -0.87 -24.57 12.85 55.43 0.71 -23.86 16 12 Si 0.89 21.67 29.54 -169.99 -5.02 16.65 16 13 H -0.28 -6.82 7.11 56.52 0.40 -6.42 16 14 H -0.29 -7.11 7.11 56.52 0.40 -6.71 16 15 H -0.28 -6.75 7.11 56.52 0.40 -6.35 16 16 C 0.08 1.65 5.89 -3.83 -0.02 1.63 16 17 N -0.83 -15.82 9.35 -10.37 -0.10 -15.92 16 18 C -0.06 -1.20 6.33 -39.36 -0.25 -1.45 16 19 Cl -0.05 -1.12 26.55 -51.86 -1.38 -2.50 16 20 C 0.10 1.86 6.67 -39.19 -0.26 1.60 16 21 O -0.49 -8.12 12.01 -19.51 -0.23 -8.36 16 22 H 0.06 0.84 8.14 -51.93 -0.42 0.42 16 23 H 0.06 0.66 8.09 -51.93 -0.42 0.24 16 24 H 0.06 0.72 7.53 -51.93 -0.39 0.33 16 25 H 0.12 1.65 8.06 -52.49 -0.42 1.23 16 26 H 0.13 2.37 7.64 -52.49 -0.40 1.97 16 27 H 0.26 7.19 8.31 -40.82 -0.34 6.85 16 28 H -0.01 -0.11 8.14 -51.92 -0.42 -0.54 16 29 H 0.05 1.09 7.58 -51.93 -0.39 0.70 16 30 H 0.34 6.34 8.99 -39.29 -0.35 5.99 16 31 H 0.32 4.97 9.08 -39.29 -0.36 4.61 16 32 H 0.38 4.40 9.06 45.56 0.41 4.82 16 LS Contribution 288.56 15.07 4.35 4.35 Total: -1.00 -30.14 288.56 -7.25 -37.39 By element: Atomic # 1 Polarization: 13.08 SS G_CDS: -3.00 Total: 10.08 kcal Atomic # 6 Polarization: -15.25 SS G_CDS: -2.58 Total: -17.84 kcal Atomic # 7 Polarization: -40.39 SS G_CDS: 0.62 Total: -39.78 kcal Atomic # 8 Polarization: -8.12 SS G_CDS: -0.23 Total: -8.36 kcal Atomic # 14 Polarization: 21.67 SS G_CDS: -5.02 Total: 16.65 kcal Atomic # 17 Polarization: -1.12 SS G_CDS: -1.38 Total: -2.50 kcal Total LS contribution 4.35 Total: 4.35 kcal Total: -30.14 -7.25 -37.39 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260528578.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.382 kcal (2) G-P(sol) polarization free energy of solvation -30.137 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.755 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.250 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.387 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.005 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds