Wall clock time and date at job start Mon Mar 30 2020 06:11:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53001 * 109.47261 * 2 1 4 4 C 1.53004 * 109.47044 * 120.00254 * 2 1 3 5 5 H 1.09004 * 109.46781 * 298.48022 * 4 2 1 6 6 C 1.50700 * 109.47461 * 58.47932 * 4 2 1 7 7 H 1.08002 * 119.99849 * 27.16570 * 6 4 2 8 8 C 1.37872 * 119.99716 * 207.17090 * 6 4 2 9 9 N 1.31511 * 120.00823 * 5.80873 * 8 6 4 10 10 Si 1.86802 * 119.99622 * 185.81021 * 8 6 4 11 11 H 1.48506 * 109.47050 * 60.00001 * 10 8 6 12 12 H 1.48501 * 109.47440 * 179.97438 * 10 8 6 13 13 H 1.48500 * 109.47523 * 299.99933 * 10 8 6 14 14 C 1.50701 * 109.47034 * 178.48281 * 4 2 1 15 15 C 1.38081 * 120.34624 * 299.99759 * 14 4 2 16 16 N 1.31953 * 120.85393 * 180.02562 * 15 14 4 17 17 C 1.32245 * 121.65956 * 359.97438 * 16 15 14 18 18 O 1.35701 * 119.69141 * 179.97438 * 17 16 15 19 19 C 1.38983 * 120.62072 * 0.25456 * 17 16 15 20 20 Cl 1.73601 * 120.45577 * 179.74311 * 19 17 16 21 21 C 1.38505 * 119.09070 * 359.50107 * 19 17 16 22 22 H 1.09006 * 109.47016 * 294.51307 * 1 2 3 23 23 H 1.08999 * 109.47450 * 54.51706 * 1 2 3 24 24 H 1.09004 * 109.47006 * 174.51725 * 1 2 3 25 25 H 1.08997 * 109.47223 * 240.00019 * 2 1 3 26 26 H 1.08997 * 109.46930 * 180.02562 * 3 2 1 27 27 H 1.08997 * 109.47079 * 300.00068 * 3 2 1 28 28 H 1.08997 * 109.46986 * 59.99874 * 3 2 1 29 29 H 0.96997 * 120.00489 * 180.02562 * 9 8 6 30 30 H 1.07999 * 119.57584 * 0.04350 * 15 14 4 31 31 H 0.96698 * 114.00294 * 89.99738 * 18 17 16 32 32 H 1.08005 * 120.76245 * 180.24350 * 21 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 1.2492 5 1 1.6990 -0.1920 2.1390 6 6 1.5071 -2.1308 1.2682 7 1 1.2612 -2.6277 0.3414 8 6 1.3336 -2.7860 2.4689 9 7 1.5234 -2.1450 3.6014 10 14 0.8288 -4.5844 2.4869 11 1 1.8549 -5.3937 1.7816 12 1 0.7105 -5.0514 3.8917 13 1 -0.4798 -4.7383 1.8019 14 6 3.5465 -0.7540 1.2306 15 6 4.2181 -1.3737 0.1954 16 7 5.5369 -1.4087 0.1693 17 6 6.2650 -0.8560 1.1249 18 8 7.6191 -0.9160 1.0581 19 6 5.6564 -0.2192 2.1999 20 17 6.6163 0.4991 3.4554 21 6 4.2736 -0.1612 2.2533 22 1 -0.3633 0.4264 0.9351 23 1 -0.3634 0.5965 -0.8368 24 1 -0.3633 -1.0230 -0.0982 25 1 1.8933 -0.5138 -0.8900 26 1 3.1300 1.4424 -0.0005 27 1 1.6767 1.9563 -0.8900 28 1 1.6767 1.9563 0.8900 29 1 1.4017 -2.6061 4.4460 30 1 3.6568 -1.8356 -0.6033 31 1 8.0232 -0.1727 0.5899 32 1 3.7726 0.3303 3.0742 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260913257.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:11:30 Heat of formation + Delta-G solvation = -35.397667 kcal Electronic energy + Delta-G solvation = -17004.923985 eV Core-core repulsion = 14183.954463 eV Total energy + Delta-G solvation = -2820.969522 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -39.95581 -37.23681 -36.15708 -35.53126 -32.51403 -31.69083 -29.89992 -27.11884 -26.07892 -23.64816 -23.16385 -21.59232 -19.01406 -18.40350 -16.89258 -16.24662 -15.57002 -15.01730 -14.70398 -14.14423 -13.63179 -13.24450 -12.86182 -12.57161 -12.28212 -11.97764 -11.75976 -11.52872 -11.51741 -11.25058 -11.01773 -10.89427 -10.74583 -10.45650 -10.34757 -10.05226 -9.63051 -9.20768 -8.93296 -8.82880 -8.55611 -7.87810 -6.21492 -4.24810 1.51581 1.82289 2.48376 3.23782 3.29602 3.32342 3.98616 4.27972 4.34931 5.10137 5.28381 5.54284 5.68930 5.74205 5.81192 5.88179 6.00728 6.16922 6.28300 6.46774 6.51872 6.56139 6.68967 6.82634 6.96256 7.08352 7.13505 7.29089 7.59213 7.74263 7.81665 8.13506 8.43740 8.80634 9.39610 10.86611 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.018297 B = 0.008253 C = 0.007031 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1529.951600 B = 3391.916912 C = 3981.172337 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.127 4.127 2 C -0.084 4.084 3 C -0.146 4.146 4 C 0.077 3.923 5 H 0.068 0.932 6 C -0.511 4.511 7 H 0.062 0.938 8 C 0.070 3.930 9 N -0.881 5.881 10 Si 0.889 3.111 11 H -0.275 1.275 12 H -0.287 1.287 13 H -0.274 1.274 14 C -0.055 4.055 15 C 0.119 3.881 16 N -0.493 5.493 17 C 0.274 3.726 18 O -0.476 6.476 19 C -0.098 4.098 20 Cl -0.072 7.072 21 C -0.061 4.061 22 H 0.047 0.953 23 H 0.030 0.970 24 H 0.062 0.938 25 H 0.055 0.945 26 H 0.043 0.957 27 H 0.041 0.959 28 H 0.050 0.950 29 H 0.265 0.735 30 H 0.160 0.840 31 H 0.388 0.612 32 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.219 6.429 -4.008 8.671 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C -0.103 4.103 3 C -0.203 4.203 4 C 0.057 3.943 5 H 0.086 0.914 6 C -0.548 4.548 7 H 0.080 0.920 8 C -0.134 4.134 9 N -0.517 5.517 10 Si 0.716 3.284 11 H -0.200 1.200 12 H -0.212 1.212 13 H -0.200 1.200 14 C -0.058 4.058 15 C -0.038 4.038 16 N -0.211 5.211 17 C 0.095 3.905 18 O -0.282 6.282 19 C -0.128 4.128 20 Cl -0.043 7.043 21 C -0.087 4.087 22 H 0.067 0.933 23 H 0.049 0.951 24 H 0.081 0.919 25 H 0.074 0.926 26 H 0.062 0.938 27 H 0.060 0.940 28 H 0.069 0.931 29 H 0.075 0.925 30 H 0.177 0.823 31 H 0.243 0.757 32 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 4.712 5.545 -4.029 8.318 hybrid contribution -0.331 -0.294 0.841 0.950 sum 4.381 5.251 -3.188 7.546 Atomic orbital electron populations 1.21620 0.95504 1.01663 0.99594 1.21172 0.95808 0.94062 0.99252 1.21904 1.00204 0.97724 1.00499 1.18080 0.84234 0.96927 0.95032 0.91426 1.20929 1.43122 0.98011 0.92762 0.92013 1.24989 0.94568 0.98142 0.95721 1.69879 1.47985 1.36364 0.97469 0.86693 0.79244 0.85230 0.77211 1.20042 1.21235 1.19982 1.21878 1.00989 0.91588 0.91337 1.22426 0.87253 0.95783 0.98351 1.67226 1.08938 1.17922 1.26995 1.18662 0.84383 0.96748 0.90755 1.84833 1.14430 1.50457 1.78444 1.22174 0.93157 1.03790 0.93669 1.98321 1.71915 1.82112 1.51988 1.21482 0.90039 0.97891 0.99336 0.93336 0.95111 0.91886 0.92628 0.93751 0.94036 0.93130 0.92520 0.82286 0.75676 0.84073 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.20 8.81 37.16 0.33 -1.87 16 2 C -0.08 -1.52 2.34 -90.62 -0.21 -1.73 16 3 C -0.15 -2.32 8.97 37.16 0.33 -1.99 16 4 C 0.08 1.64 1.60 -92.92 -0.15 1.49 16 5 H 0.07 1.62 7.25 -51.93 -0.38 1.24 16 6 C -0.51 -12.31 6.74 -34.44 -0.23 -12.54 16 7 H 0.06 1.47 7.75 -52.49 -0.41 1.06 16 8 C 0.07 1.78 5.45 -17.82 -0.10 1.69 16 9 N -0.88 -23.48 12.88 55.43 0.71 -22.76 16 10 Si 0.89 20.28 29.54 -169.99 -5.02 15.26 16 11 H -0.28 -6.36 7.11 56.52 0.40 -5.95 16 12 H -0.29 -6.61 7.11 56.52 0.40 -6.21 16 13 H -0.27 -6.13 7.11 56.52 0.40 -5.73 16 14 C -0.06 -1.14 3.59 -104.48 -0.38 -1.51 16 15 C 0.12 2.38 9.97 -17.56 -0.18 2.20 16 16 N -0.49 -9.87 10.39 -13.30 -0.14 -10.01 16 17 C 0.27 5.18 7.74 -17.10 -0.13 5.05 16 18 O -0.48 -7.78 13.03 -18.81 -0.25 -8.03 16 19 C -0.10 -1.84 6.36 -39.21 -0.25 -2.09 16 20 Cl -0.07 -1.18 28.54 -51.86 -1.48 -2.66 16 21 C -0.06 -1.23 9.60 -39.28 -0.38 -1.61 16 22 H 0.05 0.87 8.14 -51.93 -0.42 0.45 16 23 H 0.03 0.45 8.14 -51.93 -0.42 0.03 16 24 H 0.06 1.16 7.33 -51.93 -0.38 0.78 16 25 H 0.06 0.98 7.35 -51.93 -0.38 0.60 16 26 H 0.04 0.71 7.26 -51.93 -0.38 0.33 16 27 H 0.04 0.58 8.14 -51.93 -0.42 0.16 16 28 H 0.05 0.80 8.14 -51.93 -0.42 0.37 16 29 H 0.27 6.89 8.31 -40.82 -0.34 6.55 16 30 H 0.16 2.98 7.56 -52.49 -0.40 2.58 16 31 H 0.39 4.30 9.06 45.56 0.41 4.71 16 32 H 0.14 2.81 8.00 -52.48 -0.42 2.39 16 LS Contribution 289.34 15.07 4.36 4.36 Total: -1.00 -27.08 289.34 -6.30 -33.38 By element: Atomic # 1 Polarization: 6.51 SS G_CDS: -3.15 Total: 3.36 kcal Atomic # 6 Polarization: -11.57 SS G_CDS: -1.34 Total: -12.91 kcal Atomic # 7 Polarization: -33.35 SS G_CDS: 0.58 Total: -32.77 kcal Atomic # 8 Polarization: -7.78 SS G_CDS: -0.25 Total: -8.03 kcal Atomic # 14 Polarization: 20.28 SS G_CDS: -5.02 Total: 15.26 kcal Atomic # 17 Polarization: -1.18 SS G_CDS: -1.48 Total: -2.66 kcal Total LS contribution 4.36 Total: 4.36 kcal Total: -27.08 -6.30 -33.38 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260913257.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.013 kcal (2) G-P(sol) polarization free energy of solvation -27.082 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.096 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.302 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.384 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.398 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds