Wall clock time and date at job start Mon Mar 30 2020 06:48:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35901 * 116.99960 * 2 1 4 4 C 1.38728 * 120.05022 * 0.02562 * 3 2 1 5 5 C 1.38239 * 119.93405 * 179.97438 * 4 3 2 6 6 Cl 1.73598 * 119.98549 * 179.97438 * 5 4 3 7 7 C 1.38411 * 120.02730 * 359.97438 * 5 4 3 8 8 C 1.38223 * 120.09715 * 0.02562 * 7 5 4 9 9 C 1.38178 * 120.07080 * 359.74435 * 8 7 5 10 10 C 1.50697 * 120.01709 * 180.25157 * 9 8 7 11 11 H 1.09004 * 109.47257 * 180.24875 * 10 9 8 12 12 C 1.50704 * 109.47067 * 60.25251 * 10 9 8 13 13 H 1.07991 * 120.00501 * 269.05014 * 12 10 9 14 14 C 1.37881 * 119.99774 * 89.04441 * 12 10 9 15 15 N 1.31513 * 120.00152 * 6.80687 * 14 12 10 16 16 Si 1.86803 * 120.00157 * 186.80671 * 14 12 10 17 17 H 1.48504 * 109.46728 * 0.02562 * 16 14 12 18 18 H 1.48492 * 109.47226 * 119.99707 * 16 14 12 19 19 H 1.48492 * 109.47150 * 240.00500 * 16 14 12 20 20 C 1.53003 * 109.47312 * 300.25737 * 10 9 8 21 21 N 1.46899 * 109.47033 * 185.34160 * 20 10 9 22 22 H 1.09004 * 109.46555 * 60.00185 * 1 2 3 23 23 H 1.09001 * 109.46928 * 179.97438 * 1 2 3 24 24 H 1.08992 * 109.46984 * 300.00194 * 1 2 3 25 25 H 1.07998 * 120.03154 * 359.94721 * 4 3 2 26 26 H 1.07997 * 119.94988 * 180.02562 * 7 5 4 27 27 H 1.08002 * 119.96622 * 179.97438 * 8 7 5 28 28 H 0.97001 * 119.99923 * 179.97438 * 15 14 12 29 29 H 1.09002 * 109.46803 * 305.33905 * 20 10 9 30 30 H 1.08993 * 109.47223 * 65.34248 * 20 10 9 31 31 H 1.00908 * 111.00103 * 56.04247 * 21 20 10 32 32 H 1.00897 * 111.00085 * 179.97438 * 21 20 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 1.2914 2.3750 0.0005 5 6 1.9215 3.6055 0.0011 6 17 0.9786 5.0630 0.0011 7 6 3.3038 3.6758 0.0016 8 6 4.0568 2.5166 0.0011 9 6 3.4312 1.2846 0.0053 10 6 4.2534 0.0217 0.0105 11 1 3.5903 -0.8435 0.0089 12 6 5.1176 -0.0101 1.2447 13 1 6.1137 0.4060 1.2173 14 6 4.6364 -0.5704 2.4090 15 7 3.4793 -1.1954 2.4087 16 14 5.6280 -0.4418 3.9869 17 1 6.8838 0.3055 3.7227 18 1 4.8321 0.2764 5.0145 19 1 5.9561 -1.8042 4.4777 20 6 5.1414 -0.0139 -1.2349 21 7 5.8473 -1.3007 -1.2964 22 1 -0.3632 0.5138 -0.8901 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5138 0.8899 25 1 0.2128 2.3200 0.0001 26 1 3.7948 4.6377 0.0024 27 1 5.1353 2.5740 0.0011 28 1 3.1409 -1.5899 3.2277 29 1 4.5237 0.1045 -2.1251 30 1 5.8680 0.7970 -1.1863 31 1 5.1963 -2.0715 -1.2772 32 1 6.4406 -1.3492 -2.1110 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261107535.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:48:43 Heat of formation + Delta-G solvation = -24.580215 kcal Electronic energy + Delta-G solvation = -17034.394648 eV Core-core repulsion = 14213.894206 eV Total energy + Delta-G solvation = -2820.500442 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -39.56991 -37.00839 -36.10787 -34.80845 -32.23710 -30.75006 -29.57029 -27.42957 -26.39408 -24.13841 -22.20951 -21.44772 -19.61736 -17.51381 -16.52921 -15.76072 -15.20299 -15.06327 -14.63121 -14.46718 -13.84686 -13.57442 -13.31153 -12.80713 -12.63500 -12.26093 -12.05161 -11.51032 -11.37076 -11.15891 -10.90792 -10.64929 -10.55233 -10.45003 -10.25456 -10.08676 -9.43513 -9.00359 -8.35475 -8.10049 -7.68960 -7.29081 -5.91214 -3.91186 1.89270 2.05270 2.56401 3.36395 3.44363 3.48505 3.99054 4.38574 4.53671 5.28088 5.36527 5.45647 5.59093 5.59322 5.60017 5.82814 5.88756 6.12632 6.25354 6.28971 6.38474 6.50483 6.77615 6.85105 7.06356 7.21050 7.45555 7.86916 7.99482 8.04410 8.17607 8.32142 8.46377 9.11845 9.68130 11.15516 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.018417 B = 0.007665 C = 0.007357 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1520.001145 B = 3652.098398 C = 3805.169696 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.282 6.282 3 C 0.138 3.862 4 C -0.210 4.210 5 C -0.024 4.024 6 Cl -0.098 7.098 7 C -0.153 4.153 8 C -0.074 4.074 9 C -0.044 4.044 10 C 0.068 3.932 11 H 0.076 0.924 12 C -0.482 4.482 13 H 0.057 0.943 14 C 0.065 3.935 15 N -0.876 5.876 16 Si 0.885 3.115 17 H -0.273 1.273 18 H -0.288 1.288 19 H -0.286 1.286 20 C 0.081 3.919 21 N -0.831 5.831 22 H 0.043 0.957 23 H 0.093 0.907 24 H 0.048 0.952 25 H 0.125 0.875 26 H 0.121 0.879 27 H 0.132 0.868 28 H 0.257 0.743 29 H -0.005 1.005 30 H 0.054 0.946 31 H 0.336 0.664 32 H 0.319 0.681 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.743 5.447 -6.642 9.812 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.194 6.194 3 C 0.091 3.909 4 C -0.230 4.230 5 C -0.050 4.050 6 Cl -0.070 7.070 7 C -0.172 4.172 8 C -0.093 4.093 9 C -0.046 4.046 10 C 0.049 3.951 11 H 0.094 0.906 12 C -0.519 4.519 13 H 0.075 0.925 14 C -0.137 4.137 15 N -0.514 5.514 16 Si 0.713 3.287 17 H -0.198 1.198 18 H -0.214 1.214 19 H -0.212 1.212 20 C -0.050 4.050 21 N -0.359 5.359 22 H 0.062 0.938 23 H 0.112 0.888 24 H 0.066 0.934 25 H 0.142 0.858 26 H 0.139 0.861 27 H 0.150 0.850 28 H 0.066 0.934 29 H 0.013 0.987 30 H 0.073 0.927 31 H 0.148 0.852 32 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges -4.542 5.496 -5.821 9.204 hybrid contribution -0.550 0.328 0.276 0.697 sum -5.091 5.823 -5.545 9.517 Atomic orbital electron populations 1.22929 0.80391 1.03166 1.00153 1.86323 1.19332 1.25654 1.88047 1.18772 0.92158 0.83406 0.96523 1.20897 0.99713 0.91035 1.11318 1.20330 0.91433 0.85806 1.07458 1.98304 1.73586 1.37761 1.97324 1.20816 0.91317 0.99139 1.05883 1.20779 0.99929 0.90360 0.98189 1.20362 0.90271 0.98251 0.95707 1.17948 0.93327 0.91275 0.92571 0.90585 1.20813 0.99330 1.37909 0.93882 0.92476 1.24964 0.95067 0.94827 0.98871 1.69997 1.19091 1.35248 1.27038 0.86652 0.80382 0.77627 0.84029 1.19764 1.21398 1.21228 1.21851 0.95634 0.91096 0.96419 1.58497 1.26993 1.04441 1.45971 0.93814 0.88844 0.93353 0.85756 0.86123 0.85025 0.93371 0.98739 0.92710 0.85155 0.87090 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.45 9.81 101.05 0.99 1.44 16 2 O -0.28 -5.90 9.26 -19.43 -0.18 -6.08 16 3 C 0.14 2.90 6.66 -39.22 -0.26 2.64 16 4 C -0.21 -3.89 8.82 -39.40 -0.35 -4.24 16 5 C -0.02 -0.42 6.32 -39.52 -0.25 -0.67 16 6 Cl -0.10 -1.50 28.95 -51.86 -1.50 -3.00 16 7 C -0.15 -2.72 9.83 -39.52 -0.39 -3.11 16 8 C -0.07 -1.47 8.87 -39.61 -0.35 -1.82 16 9 C -0.04 -0.97 4.78 -104.47 -0.50 -1.47 16 10 C 0.07 1.60 2.14 -92.92 -0.20 1.40 16 11 H 0.08 2.02 6.24 -51.93 -0.32 1.70 16 12 C -0.48 -12.72 7.68 -34.44 -0.26 -12.99 16 13 H 0.06 1.53 7.82 -52.49 -0.41 1.12 16 14 C 0.07 1.79 5.45 -17.82 -0.10 1.69 16 15 N -0.88 -24.77 12.85 55.43 0.71 -24.06 16 16 Si 0.88 21.55 29.54 -169.99 -5.02 16.53 16 17 H -0.27 -6.57 7.11 56.52 0.40 -6.17 16 18 H -0.29 -7.06 7.11 56.52 0.40 -6.66 16 19 H -0.29 -6.97 7.11 56.52 0.40 -6.56 16 20 C 0.08 1.64 5.89 -3.82 -0.02 1.61 16 21 N -0.83 -15.85 9.35 -10.37 -0.10 -15.95 16 22 H 0.04 0.57 7.66 -51.93 -0.40 0.17 16 23 H 0.09 1.25 8.14 -51.93 -0.42 0.82 16 24 H 0.05 0.72 7.66 -51.93 -0.40 0.32 16 25 H 0.12 2.02 6.30 -52.49 -0.33 1.69 16 26 H 0.12 1.85 8.06 -52.49 -0.42 1.43 16 27 H 0.13 2.46 7.63 -52.49 -0.40 2.06 16 28 H 0.26 7.02 8.31 -40.82 -0.34 6.68 16 29 H -0.01 -0.11 8.14 -51.93 -0.42 -0.53 16 30 H 0.05 1.09 7.57 -51.93 -0.39 0.69 16 31 H 0.34 6.34 8.99 -39.29 -0.35 5.98 16 32 H 0.32 4.97 9.08 -39.29 -0.36 4.62 16 LS Contribution 289.12 15.07 4.36 4.36 Total: -1.00 -29.14 289.12 -7.19 -36.33 By element: Atomic # 1 Polarization: 11.15 SS G_CDS: -3.77 Total: 7.38 kcal Atomic # 6 Polarization: -13.82 SS G_CDS: -1.69 Total: -15.51 kcal Atomic # 7 Polarization: -40.63 SS G_CDS: 0.62 Total: -40.01 kcal Atomic # 8 Polarization: -5.90 SS G_CDS: -0.18 Total: -6.08 kcal Atomic # 14 Polarization: 21.55 SS G_CDS: -5.02 Total: 16.53 kcal Atomic # 17 Polarization: -1.50 SS G_CDS: -1.50 Total: -3.00 kcal Total LS contribution 4.36 Total: 4.36 kcal Total: -29.14 -7.19 -36.33 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261107535.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.745 kcal (2) G-P(sol) polarization free energy of solvation -29.138 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.393 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.187 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.325 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.580 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds