Wall clock time and date at job start Mon Mar 30 2020 06:49:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35907 * 117.00113 * 2 1 4 4 C 1.38766 * 120.04512 * 0.02562 * 3 2 1 5 5 C 1.38132 * 119.96710 * 179.97438 * 4 3 2 6 6 C 1.38265 * 120.06819 * 0.02562 * 5 4 3 7 7 C 1.50695 * 119.94965 * 179.97438 * 6 5 4 8 8 H 1.09001 * 109.47318 * 180.02562 * 7 6 5 9 9 C 1.50699 * 109.47660 * 59.99588 * 7 6 5 10 10 H 1.08008 * 119.99548 * 354.56391 * 9 7 6 11 11 C 1.37871 * 120.00307 * 174.55273 * 9 7 6 12 12 N 1.31518 * 120.00115 * 350.58169 * 11 9 7 13 13 Si 1.86802 * 120.00133 * 170.57712 * 11 9 7 14 14 H 1.48507 * 109.46928 * 60.00293 * 13 11 9 15 15 H 1.48495 * 109.47387 * 180.02562 * 13 11 9 16 16 H 1.48499 * 109.47015 * 300.00647 * 13 11 9 17 17 C 1.53006 * 109.47234 * 299.99619 * 7 6 5 18 18 N 1.46894 * 109.47201 * 296.84677 * 17 7 6 19 19 C 1.38363 * 120.10050 * 359.95880 * 6 5 4 20 20 Cl 1.73604 * 119.98784 * 180.02562 * 19 6 5 21 21 C 1.38278 * 120.02837 * 0.03926 * 19 6 5 22 22 H 1.09001 * 109.46770 * 180.02562 * 1 2 3 23 23 H 1.08996 * 109.47496 * 300.00701 * 1 2 3 24 24 H 1.09004 * 109.46913 * 60.00609 * 1 2 3 25 25 H 1.07994 * 120.01769 * 359.97438 * 4 3 2 26 26 H 1.07997 * 119.96181 * 180.02562 * 5 4 3 27 27 H 0.96998 * 119.99953 * 179.97438 * 12 11 9 28 28 H 1.09006 * 109.46479 * 56.84334 * 17 7 6 29 29 H 1.08998 * 109.47455 * 176.84182 * 17 7 6 30 30 H 1.00896 * 111.00159 * 184.48449 * 18 17 7 31 31 H 1.00907 * 111.00073 * 308.43119 * 18 17 7 32 32 H 1.08003 * 120.03465 * 180.25161 * 21 19 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 1.2912 2.3753 0.0005 5 6 1.9200 3.6052 0.0011 6 6 3.3007 3.6773 0.0005 7 6 3.9840 5.0205 0.0005 8 1 5.0647 4.8785 -0.0004 9 6 3.5790 5.7902 1.2312 10 1 2.8292 5.3886 1.8968 11 6 4.1658 7.0068 1.5076 12 7 5.2035 7.4105 0.8077 13 14 3.4868 8.0819 2.8760 14 1 3.5596 7.3475 4.1648 15 1 4.2883 9.3284 2.9702 16 1 2.0724 8.4245 2.5808 17 6 3.5719 5.8023 -1.2485 18 7 4.0333 5.0892 -2.4469 19 6 4.0561 2.5181 0.0003 20 17 5.7896 2.6120 0.0003 21 6 3.4309 1.2847 -0.0002 22 1 -0.3633 -1.0277 0.0005 23 1 -0.3634 0.5139 0.8899 24 1 -0.3633 0.5138 -0.8901 25 1 0.2126 2.3200 0.0005 26 1 1.3324 4.5114 0.0019 27 1 5.6161 8.2666 1.0019 28 1 2.4862 5.8958 -1.2767 29 1 4.0215 6.7949 -1.2206 30 1 3.8379 5.6210 -3.2818 31 1 5.0157 4.8685 -2.3806 32 1 4.0204 0.3798 0.0038 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261249373.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:49:36 Heat of formation + Delta-G solvation = -27.935640 kcal Electronic energy + Delta-G solvation = -16811.076001 eV Core-core repulsion = 13990.430057 eV Total energy + Delta-G solvation = -2820.645944 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -39.71022 -37.59863 -35.62821 -34.70507 -32.20832 -30.64655 -30.06092 -27.77357 -26.35979 -23.83458 -22.58345 -21.53630 -19.59230 -17.83757 -16.62211 -15.83536 -15.49195 -15.15621 -14.64740 -14.47178 -13.86233 -13.71527 -13.21747 -12.97191 -12.78968 -12.12373 -12.01874 -11.77693 -11.44215 -11.19572 -10.99431 -10.80664 -10.65159 -10.30931 -10.16706 -9.90426 -9.47444 -9.23119 -8.41623 -8.22697 -7.65044 -7.37521 -6.10436 -4.12688 1.77993 2.06497 2.77522 3.27956 3.33042 3.35869 3.68194 4.28218 4.42778 5.12757 5.20516 5.24508 5.34022 5.43126 5.53616 5.69787 5.79804 5.99021 6.08911 6.37932 6.61507 6.74905 6.87580 6.94411 7.10403 7.22807 7.41675 7.75308 7.82732 7.90735 8.04707 8.31394 8.38762 8.90769 9.50321 10.97594 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.021041 B = 0.007381 C = 0.006548 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1330.423340 B = 3792.672301 C = 4274.933401 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.323 6.323 3 C 0.103 3.897 4 C -0.204 4.204 5 C -0.064 4.064 6 C -0.031 4.031 7 C 0.072 3.928 8 H 0.060 0.940 9 C -0.512 4.512 10 H 0.058 0.942 11 C 0.067 3.933 12 N -0.886 5.886 13 Si 0.889 3.111 14 H -0.276 1.276 15 H -0.287 1.287 16 H -0.276 1.276 17 C 0.073 3.927 18 N -0.856 5.856 19 C -0.003 4.003 20 Cl -0.069 7.069 21 C -0.148 4.148 22 H 0.093 0.907 23 H 0.052 0.948 24 H 0.052 0.948 25 H 0.121 0.879 26 H 0.130 0.870 27 H 0.262 0.738 28 H 0.046 0.954 29 H 0.045 0.955 30 H 0.319 0.681 31 H 0.332 0.668 32 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.865 -9.123 -3.198 11.308 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.237 6.237 3 C 0.059 3.941 4 C -0.223 4.223 5 C -0.082 4.082 6 C -0.032 4.032 7 C 0.054 3.946 8 H 0.078 0.922 9 C -0.551 4.551 10 H 0.077 0.923 11 C -0.135 4.135 12 N -0.523 5.523 13 Si 0.717 3.283 14 H -0.202 1.202 15 H -0.213 1.213 16 H -0.202 1.202 17 C -0.057 4.057 18 N -0.383 5.383 19 C -0.029 4.029 20 Cl -0.040 7.040 21 C -0.167 4.167 22 H 0.112 0.888 23 H 0.071 0.929 24 H 0.071 0.929 25 H 0.139 0.861 26 H 0.147 0.853 27 H 0.072 0.928 28 H 0.064 0.936 29 H 0.063 0.937 30 H 0.129 0.871 31 H 0.143 0.857 32 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -6.021 -9.708 -2.983 11.807 hybrid contribution 0.135 1.656 0.631 1.778 sum -5.886 -8.052 -2.352 10.247 Atomic orbital electron populations 1.22947 0.79091 1.03148 1.01232 1.85990 1.20763 1.27285 1.89696 1.18538 0.91498 0.83872 1.00211 1.21208 0.99428 0.92546 1.09096 1.20749 0.94021 0.96529 0.96917 1.20200 0.92964 0.95937 0.94130 1.18034 0.97322 0.86155 0.93139 0.92203 1.21006 1.22882 1.03671 1.07520 0.92330 1.24942 0.94317 0.97969 0.96309 1.69950 1.20145 1.21170 1.41068 0.86692 0.79157 0.79898 0.82552 1.20170 1.21294 1.20184 1.21950 0.98029 0.96893 0.88829 1.59017 1.23236 1.51179 1.04877 1.20432 0.84344 0.93669 1.04492 1.98322 1.10361 1.98403 1.96885 1.19972 0.91529 0.96889 1.08339 0.88847 0.92929 0.92918 0.86110 0.85262 0.92828 0.93576 0.93654 0.87080 0.85661 0.85414 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.33 9.81 101.05 0.99 1.33 16 2 O -0.32 -4.93 10.50 -19.45 -0.20 -5.14 16 3 C 0.10 1.79 6.69 -39.22 -0.26 1.52 16 4 C -0.20 -3.47 9.04 -39.42 -0.36 -3.82 16 5 C -0.06 -1.25 8.61 -39.61 -0.34 -1.59 16 6 C -0.03 -0.67 4.43 -104.57 -0.46 -1.14 16 7 C 0.07 1.73 1.82 -92.92 -0.17 1.56 16 8 H 0.06 1.55 6.10 -51.93 -0.32 1.23 16 9 C -0.51 -13.47 8.19 -34.44 -0.28 -13.75 16 10 H 0.06 1.54 7.55 -52.48 -0.40 1.14 16 11 C 0.07 1.79 5.18 -17.82 -0.09 1.69 16 12 N -0.89 -24.44 12.15 55.43 0.67 -23.76 16 13 Si 0.89 20.70 29.55 -169.99 -5.02 15.68 16 14 H -0.28 -6.44 7.11 56.52 0.40 -6.04 16 15 H -0.29 -6.67 7.11 56.52 0.40 -6.27 16 16 H -0.28 -6.33 7.11 56.52 0.40 -5.93 16 17 C 0.07 1.64 5.95 -3.82 -0.02 1.61 16 18 N -0.86 -16.49 9.32 -10.37 -0.10 -16.59 16 19 C 0.00 -0.05 6.31 -39.52 -0.25 -0.30 16 20 Cl -0.07 -1.33 27.00 -51.86 -1.40 -2.73 16 21 C -0.15 -2.70 9.77 -39.40 -0.38 -3.09 16 22 H 0.09 0.75 8.14 -51.93 -0.42 0.32 16 23 H 0.05 0.53 7.66 -51.93 -0.40 0.13 16 24 H 0.05 0.52 7.66 -51.93 -0.40 0.12 16 25 H 0.12 1.68 6.30 -52.49 -0.33 1.35 16 26 H 0.13 2.48 7.55 -52.49 -0.40 2.08 16 27 H 0.26 6.96 8.31 -40.82 -0.34 6.62 16 28 H 0.05 1.02 7.28 -51.93 -0.38 0.64 16 29 H 0.05 1.13 6.83 -51.93 -0.35 0.77 16 30 H 0.32 5.37 9.08 -39.29 -0.36 5.01 16 31 H 0.33 6.43 8.93 -39.29 -0.35 6.08 16 32 H 0.13 2.11 8.06 -52.48 -0.42 1.68 16 LS Contribution 285.08 15.07 4.30 4.30 Total: -1.00 -28.22 285.08 -7.04 -35.26 By element: Atomic # 1 Polarization: 12.62 SS G_CDS: -3.66 Total: 8.96 kcal Atomic # 6 Polarization: -14.35 SS G_CDS: -1.63 Total: -15.98 kcal Atomic # 7 Polarization: -40.93 SS G_CDS: 0.58 Total: -40.35 kcal Atomic # 8 Polarization: -4.93 SS G_CDS: -0.20 Total: -5.14 kcal Atomic # 14 Polarization: 20.70 SS G_CDS: -5.02 Total: 15.68 kcal Atomic # 17 Polarization: -1.33 SS G_CDS: -1.40 Total: -2.73 kcal Total LS contribution 4.30 Total: 4.30 kcal Total: -28.22 -7.04 -35.26 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261249373.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.326 kcal (2) G-P(sol) polarization free energy of solvation -28.219 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.894 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.042 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.261 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.936 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds