Wall clock time and date at job start Mon Mar 30 2020 06:49:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.35931 * 116.99919 * 2 1 4 4 C 1.38849 * 120.05821 * 269.95615 * 3 2 1 5 5 Cl 1.73603 * 120.04203 * 0.02562 * 4 3 2 6 6 C 1.38218 * 119.92252 * 179.97438 * 4 3 2 7 7 C 1.38290 * 120.04204 * 0.05852 * 6 4 3 8 8 C 1.38229 * 120.11929 * 359.97438 * 7 6 4 9 9 C 1.38195 * 120.07957 * 359.97438 * 8 7 6 10 10 C 1.50700 * 120.02475 * 179.74855 * 9 8 7 11 11 H 1.08997 * 109.47488 * 145.00037 * 10 9 8 12 12 N 1.46896 * 109.47254 * 24.99460 * 10 9 8 13 13 C 1.53001 * 109.47019 * 264.99739 * 10 9 8 14 14 C 1.50693 * 109.47262 * 185.00013 * 13 10 9 15 15 H 1.08000 * 120.00427 * 359.97438 * 14 13 10 16 16 C 1.37881 * 120.00252 * 180.02562 * 14 13 10 17 17 N 1.31523 * 119.99733 * 359.97438 * 16 14 13 18 18 Si 1.86793 * 120.00456 * 179.97438 * 16 14 13 19 19 H 1.48503 * 109.47058 * 59.99679 * 18 16 14 20 20 H 1.48496 * 109.47446 * 179.97438 * 18 16 14 21 21 H 1.48502 * 109.47264 * 299.99934 * 18 16 14 22 22 H 1.08997 * 109.46727 * 179.97438 * 1 2 3 23 23 H 1.08997 * 109.47233 * 300.00258 * 1 2 3 24 24 H 1.09007 * 109.46654 * 60.00134 * 1 2 3 25 25 H 1.08001 * 119.97960 * 180.02562 * 6 4 3 26 26 H 1.07998 * 119.93867 * 179.97438 * 7 6 4 27 27 H 1.08004 * 119.96568 * 179.97438 * 8 7 6 28 28 H 1.00895 * 111.00257 * 300.00523 * 12 10 9 29 29 H 1.00908 * 110.99298 * 63.95822 * 12 10 9 30 30 H 1.09006 * 109.47465 * 305.00360 * 13 10 9 31 31 H 1.09011 * 109.46906 * 64.99760 * 13 10 9 32 32 H 0.97001 * 119.99914 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0462 1.2112 0.0000 4 6 2.3627 1.8304 -1.2018 5 17 1.9703 1.0591 -2.7067 6 6 2.9897 3.0622 -1.1985 7 6 3.3025 3.6766 0.0003 8 6 2.9888 3.0614 1.1977 9 6 2.3610 1.8303 1.2002 10 6 2.0246 1.1581 2.5064 11 1 1.0853 0.6147 2.4041 12 7 1.8908 2.1734 3.5595 13 6 3.1411 0.1807 2.8793 14 6 2.7491 -0.5804 4.1194 15 1 1.7988 -0.3862 4.5944 16 6 3.6040 -1.5240 4.6483 17 7 4.7615 -1.7602 4.0702 18 14 3.1184 -2.4670 6.1859 19 1 1.8657 -3.2219 5.9286 20 1 4.2020 -3.4157 6.5477 21 1 2.9010 -1.5135 7.3034 22 1 -0.3633 -1.0277 -0.0005 23 1 -0.3633 0.5139 0.8899 24 1 -0.3633 0.5139 -0.8901 25 1 3.2360 3.5449 -2.1327 26 1 3.7928 4.6389 0.0009 27 1 3.2346 3.5433 2.1324 28 1 2.7491 2.6912 3.6737 29 1 1.1174 2.7928 3.3682 30 1 3.3007 -0.5189 2.0588 31 1 4.0608 0.7347 3.0684 32 1 5.3628 -2.4243 4.4420 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261260066.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:49:28 Heat of formation + Delta-G solvation = -21.870561 kcal Electronic energy + Delta-G solvation = -16842.187772 eV Core-core repulsion = 14021.804830 eV Total energy + Delta-G solvation = -2820.382942 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -40.06949 -37.18808 -36.54879 -35.23521 -32.43370 -30.10994 -29.79076 -28.25263 -26.70663 -24.54336 -22.33352 -22.05260 -19.79393 -17.76339 -16.54819 -16.27351 -15.76792 -15.31334 -15.08647 -14.38355 -14.30717 -13.80153 -13.72487 -13.06306 -12.93845 -12.19860 -12.08099 -11.58756 -11.50816 -11.34980 -11.07311 -10.91976 -10.68013 -10.55623 -10.24222 -9.78640 -9.61223 -9.06395 -8.51997 -8.34794 -8.24145 -8.04363 -5.86822 -3.85745 1.16979 1.32334 2.21403 3.42537 3.46031 3.49021 3.53180 4.00859 4.57200 4.85773 5.01493 5.18184 5.35638 5.36620 5.45669 5.49444 5.50742 5.57415 5.79745 5.83679 6.15205 6.23093 6.38049 6.52702 6.70570 6.87402 7.58483 7.67053 7.71371 7.97792 8.08526 8.14493 8.55453 9.19300 9.75460 11.24962 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.026970 B = 0.006105 C = 0.005639 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1037.942446 B = 4585.453447 C = 4963.903522 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.316 6.316 3 C 0.111 3.889 4 C -0.053 4.053 5 Cl -0.069 7.069 6 C -0.117 4.117 7 C -0.111 4.111 8 C -0.112 4.112 9 C -0.103 4.103 10 C 0.137 3.863 11 H 0.082 0.918 12 N -0.821 5.821 13 C 0.042 3.958 14 C -0.494 4.494 15 H 0.061 0.939 16 C 0.051 3.949 17 N -0.901 5.901 18 Si 0.893 3.107 19 H -0.279 1.279 20 H -0.290 1.290 21 H -0.278 1.278 22 H 0.096 0.904 23 H 0.047 0.953 24 H 0.041 0.959 25 H 0.131 0.869 26 H 0.130 0.870 27 H 0.129 0.871 28 H 0.335 0.665 29 H 0.322 0.678 30 H 0.026 0.974 31 H 0.014 0.986 32 H 0.258 0.742 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.538 10.558 -10.803 16.459 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.232 6.232 3 C 0.065 3.935 4 C -0.080 4.080 5 Cl -0.040 7.040 6 C -0.136 4.136 7 C -0.129 4.129 8 C -0.131 4.131 9 C -0.106 4.106 10 C 0.025 3.975 11 H 0.100 0.900 12 N -0.349 5.349 13 C 0.005 3.995 14 C -0.532 4.532 15 H 0.079 0.921 16 C -0.149 4.149 17 N -0.542 5.542 18 Si 0.721 3.279 19 H -0.205 1.205 20 H -0.216 1.216 21 H -0.204 1.204 22 H 0.114 0.886 23 H 0.066 0.934 24 H 0.060 0.940 25 H 0.149 0.851 26 H 0.148 0.852 27 H 0.147 0.853 28 H 0.149 0.851 29 H 0.133 0.867 30 H 0.045 0.955 31 H 0.032 0.968 32 H 0.068 0.932 Dipole moment (debyes) X Y Z Total from point charges -6.469 9.565 -10.397 15.539 hybrid contribution -0.025 0.238 -0.186 0.304 sum -6.493 9.804 -10.584 15.821 Atomic orbital electron populations 1.22968 0.79102 1.03493 1.00149 1.86159 1.19544 1.23472 1.94016 1.18271 0.98245 0.86799 0.90158 1.21414 1.04892 0.95159 0.86549 1.98343 1.92849 1.81415 1.31416 1.20851 1.00035 0.93574 0.99141 1.21038 1.00105 1.00183 0.91620 1.21023 0.98485 0.95031 0.98540 1.21803 0.97098 0.94143 0.97559 1.20779 1.02248 0.92594 0.81865 0.89959 1.58844 1.08519 1.19517 1.47988 1.19101 0.91067 0.92338 0.97040 1.21077 1.03471 1.18902 1.09760 0.92107 1.25013 0.95161 0.97340 0.97342 1.69971 1.09357 1.34379 1.40458 0.86646 0.77806 0.79645 0.83756 1.20458 1.21618 1.20361 0.88566 0.93400 0.94005 0.85065 0.85210 0.85299 0.85080 0.86736 0.95528 0.96776 0.93204 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.52 10.80 101.05 1.09 1.61 16 2 O -0.32 -5.77 9.15 -19.52 -0.18 -5.95 16 3 C 0.11 1.94 5.69 -39.20 -0.22 1.72 16 4 C -0.05 -0.82 6.33 -39.36 -0.25 -1.07 16 5 Cl -0.07 -0.98 28.51 -51.86 -1.48 -2.45 16 6 C -0.12 -1.54 9.83 -39.57 -0.39 -1.93 16 7 C -0.11 -1.40 10.04 -39.57 -0.40 -1.80 16 8 C -0.11 -1.65 9.27 -39.60 -0.37 -2.02 16 9 C -0.10 -1.81 5.06 -104.48 -0.53 -2.34 16 10 C 0.14 2.76 2.65 -68.87 -0.18 2.57 16 11 H 0.08 1.71 6.44 -51.93 -0.33 1.38 16 12 N -0.82 -14.60 8.54 -5.66 -0.05 -14.64 16 13 C 0.04 1.08 4.60 -27.89 -0.13 0.95 16 14 C -0.49 -14.04 8.84 -34.44 -0.30 -14.34 16 15 H 0.06 1.71 7.74 -52.49 -0.41 1.31 16 16 C 0.05 1.50 5.46 -17.81 -0.10 1.40 16 17 N -0.90 -27.65 13.29 55.43 0.74 -26.92 16 18 Si 0.89 22.27 29.54 -169.99 -5.02 17.25 16 19 H -0.28 -6.83 7.11 56.52 0.40 -6.43 16 20 H -0.29 -7.19 7.11 56.52 0.40 -6.79 16 21 H -0.28 -6.83 7.11 56.52 0.40 -6.43 16 22 H 0.10 1.19 8.14 -51.93 -0.42 0.77 16 23 H 0.05 0.65 7.19 -51.93 -0.37 0.27 16 24 H 0.04 0.51 8.14 -51.93 -0.42 0.09 16 25 H 0.13 1.38 8.06 -52.49 -0.42 0.96 16 26 H 0.13 1.22 8.06 -52.49 -0.42 0.80 16 27 H 0.13 1.68 6.29 -52.48 -0.33 1.35 16 28 H 0.33 5.61 7.21 -39.29 -0.28 5.33 16 29 H 0.32 4.69 9.06 -39.29 -0.36 4.33 16 30 H 0.03 0.76 8.14 -51.93 -0.42 0.34 16 31 H 0.01 0.39 8.14 -51.92 -0.42 -0.04 16 32 H 0.26 7.55 8.31 -40.82 -0.34 7.21 16 LS Contribution 289.84 15.07 4.37 4.37 Total: -1.00 -31.96 289.84 -7.15 -39.11 By element: Atomic # 1 Polarization: 8.22 SS G_CDS: -3.76 Total: 4.46 kcal Atomic # 6 Polarization: -13.46 SS G_CDS: -1.77 Total: -15.23 kcal Atomic # 7 Polarization: -42.25 SS G_CDS: 0.69 Total: -41.56 kcal Atomic # 8 Polarization: -5.77 SS G_CDS: -0.18 Total: -5.95 kcal Atomic # 14 Polarization: 22.27 SS G_CDS: -5.02 Total: 17.25 kcal Atomic # 17 Polarization: -0.98 SS G_CDS: -1.48 Total: -2.45 kcal Total LS contribution 4.37 Total: 4.37 kcal Total: -31.96 -7.15 -39.11 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261260066.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.243 kcal (2) G-P(sol) polarization free energy of solvation -31.962 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.719 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.152 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.114 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.871 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds