Wall clock time and date at job start Mon Mar 30 2020 06:45:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.46494 * 120.00265 * 2 1 4 4 C 1.53003 * 109.47283 * 89.99905 * 3 2 1 5 5 H 1.08999 * 109.47269 * 305.00317 * 4 3 2 6 6 O 1.42903 * 109.46459 * 65.00211 * 4 3 2 7 7 C 1.50696 * 109.47222 * 184.99877 * 4 3 2 8 8 H 1.07991 * 120.00427 * 0.02562 * 7 4 3 9 9 C 1.37879 * 119.99614 * 180.02562 * 7 4 3 10 10 N 1.31510 * 120.00261 * 0.02562 * 9 7 4 11 11 Si 1.86799 * 119.99746 * 180.02562 * 9 7 4 12 12 H 1.48499 * 109.47404 * 90.00100 * 11 9 7 13 13 H 1.48506 * 109.47412 * 210.00385 * 11 9 7 14 14 H 1.48504 * 109.47304 * 330.00008 * 11 9 7 15 15 C 1.39746 * 119.99649 * 180.02562 * 2 1 3 16 16 C 1.38896 * 120.06031 * 179.72592 * 15 2 1 17 17 C 1.38107 * 119.93847 * 179.72120 * 16 15 2 18 18 C 1.38383 * 120.06062 * 0.55115 * 17 16 15 19 19 Cl 1.73594 * 119.93911 * 179.70271 * 18 17 16 20 20 C 1.38379 * 120.12330 * 359.72289 * 18 17 16 21 21 C 1.38106 * 120.06168 * 359.97438 * 20 18 17 22 22 H 1.08993 * 109.47049 * 89.99728 * 1 2 3 23 23 H 1.08998 * 109.46629 * 210.00201 * 1 2 3 24 24 H 1.08998 * 109.46662 * 329.99746 * 1 2 3 25 25 H 1.09005 * 109.47040 * 330.00395 * 3 2 1 26 26 H 1.08999 * 109.47079 * 210.00097 * 3 2 1 27 27 H 0.96700 * 114.00311 * 60.00313 * 6 4 3 28 28 H 0.97001 * 120.00070 * 180.02562 * 10 9 7 29 29 H 1.08001 * 120.03054 * 359.97387 * 16 15 2 30 30 H 1.08003 * 119.97058 * 180.25289 * 17 16 15 31 31 H 1.07999 * 119.96960 * 179.97438 * 20 18 17 32 32 H 1.07997 * 120.03294 * 179.97438 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.1976 1.2686 0.0000 4 6 2.4526 1.7104 1.4425 5 1 1.5063 1.7549 1.9816 6 8 3.3211 0.7723 2.0813 7 6 3.0964 3.0729 1.4443 8 1 3.3026 3.5739 0.5102 9 6 3.4221 3.6798 2.6387 10 7 3.1714 3.0695 3.7763 11 14 4.2195 5.3691 2.6410 12 1 3.1652 6.4141 2.6832 13 1 5.0956 5.5014 3.8327 14 1 5.0316 5.5348 1.4088 15 6 2.1637 -1.2103 -0.0005 16 6 3.5527 -1.2118 -0.0063 17 6 4.2406 -2.4094 -0.0010 18 6 3.5474 -3.6070 -0.0015 19 17 4.4153 -5.1104 -0.0026 20 6 2.1636 -3.6085 -0.0015 21 6 1.4705 -2.4139 -0.0005 22 1 -0.3633 0.0000 -1.0276 23 1 -0.3632 -0.8900 0.5139 24 1 -0.3632 0.8900 0.5139 25 1 1.6085 2.0284 -0.5138 26 1 3.1500 1.1383 -0.5138 27 1 4.1838 0.6809 1.6541 28 1 3.4002 3.4967 4.6166 29 1 4.0942 -0.2774 -0.0108 30 1 5.3206 -2.4111 -0.0013 31 1 1.6251 -4.5446 -0.0023 32 1 0.3905 -2.4156 -0.0009 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261360787.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:45:29 Heat of formation + Delta-G solvation = -24.999884 kcal Electronic energy + Delta-G solvation = -16692.855685 eV Core-core repulsion = 13872.337045 eV Total energy + Delta-G solvation = -2820.518640 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.077 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -39.37181 -36.88977 -35.86456 -34.60948 -32.19881 -30.86117 -29.69228 -28.60739 -26.15602 -24.20646 -22.35878 -21.33235 -19.96858 -17.65141 -16.90544 -15.60614 -15.33900 -14.88839 -14.62706 -14.42788 -13.95059 -13.51183 -13.28976 -12.95048 -12.92567 -12.64766 -11.86291 -11.64501 -11.40623 -11.24838 -11.15649 -11.00553 -10.83372 -10.75687 -10.28527 -10.15205 -9.64194 -8.96854 -8.70101 -8.65223 -8.29740 -6.72670 -6.07301 -4.28759 1.68613 1.78092 2.55742 3.22384 3.30206 3.31684 3.58490 4.11751 4.33264 5.06366 5.17246 5.18766 5.40317 5.58943 5.66733 5.71239 5.79231 5.91592 5.98661 6.11817 6.27651 6.40819 6.46976 6.53372 6.63037 6.68816 7.00332 7.55379 7.62742 7.74348 7.93034 8.09126 8.74848 9.32201 9.49956 10.95462 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.030608 B = 0.005225 C = 0.004717 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 914.571761 B = 5357.146855 C = 5934.130911 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.093 3.907 2 N -0.617 5.617 3 C 0.090 3.910 4 C 0.217 3.783 5 H 0.055 0.945 6 O -0.555 6.555 7 C -0.579 4.579 8 H 0.057 0.943 9 C 0.082 3.918 10 N -0.856 5.856 11 Si 0.890 3.110 12 H -0.279 1.279 13 H -0.285 1.285 14 H -0.273 1.273 15 C 0.246 3.754 16 C -0.172 4.172 17 C -0.061 4.061 18 C -0.106 4.106 19 Cl -0.099 7.099 20 C -0.063 4.063 21 C -0.203 4.203 22 H 0.043 0.957 23 H 0.063 0.937 24 H 0.069 0.931 25 H 0.071 0.929 26 H 0.067 0.933 27 H 0.341 0.659 28 H 0.261 0.739 29 H 0.133 0.867 30 H 0.126 0.874 31 H 0.123 0.877 32 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.210 -9.811 -8.462 13.143 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.050 4.050 2 N -0.323 5.323 3 C -0.033 4.033 4 C 0.158 3.842 5 H 0.073 0.927 6 O -0.358 6.358 7 C -0.617 4.617 8 H 0.075 0.925 9 C -0.125 4.125 10 N -0.491 5.491 11 Si 0.717 3.283 12 H -0.205 1.205 13 H -0.211 1.211 14 H -0.198 1.198 15 C 0.140 3.860 16 C -0.195 4.195 17 C -0.081 4.081 18 C -0.135 4.135 19 Cl -0.070 7.070 20 C -0.083 4.083 21 C -0.226 4.226 22 H 0.061 0.939 23 H 0.082 0.918 24 H 0.088 0.912 25 H 0.089 0.911 26 H 0.085 0.915 27 H 0.185 0.815 28 H 0.071 0.929 29 H 0.151 0.849 30 H 0.144 0.856 31 H 0.141 0.859 32 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -2.784 -9.779 -7.859 12.851 hybrid contribution 0.883 1.045 -0.193 1.381 sum -1.901 -8.734 -8.052 12.031 Atomic orbital electron populations 1.21598 0.80366 1.02752 1.00330 1.46743 1.04702 1.03607 1.77287 1.22647 0.95841 0.82864 1.01910 1.19763 0.91524 0.86991 0.85935 0.92722 1.86646 1.27029 1.63957 1.58177 1.21580 1.44096 1.03217 0.92820 0.92505 1.25023 0.94701 0.97236 0.95543 1.70080 1.44654 1.37047 0.97304 0.86663 0.79462 0.84422 0.77763 1.20531 1.21071 1.19757 1.17892 0.91368 0.85910 0.90842 1.20685 0.92375 0.98070 1.08339 1.20713 0.99677 0.90291 0.97387 1.20451 0.92056 0.86039 1.14950 1.98305 1.77306 1.33785 1.97649 1.20606 0.91839 0.97865 0.97952 1.20528 0.99519 0.90588 1.11965 0.93875 0.91809 0.91229 0.91104 0.91512 0.81523 0.92880 0.84950 0.85625 0.85925 0.85746 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 1.30 10.19 59.85 0.61 1.91 16 2 N -0.62 -10.52 2.98 -179.61 -0.54 -11.05 16 3 C 0.09 1.69 4.91 -4.04 -0.02 1.67 16 4 C 0.22 5.17 3.07 -27.88 -0.09 5.08 16 5 H 0.06 1.47 8.14 -51.93 -0.42 1.05 16 6 O -0.56 -13.75 11.34 -35.23 -0.40 -14.15 16 7 C -0.58 -15.07 8.76 -34.44 -0.30 -15.37 16 8 H 0.06 1.43 7.74 -52.49 -0.41 1.02 16 9 C 0.08 2.22 5.40 -17.82 -0.10 2.12 16 10 N -0.86 -24.77 12.84 55.43 0.71 -24.06 16 11 Si 0.89 20.51 29.54 -169.99 -5.02 15.49 16 12 H -0.28 -6.37 7.11 56.52 0.40 -5.97 16 13 H -0.29 -6.60 7.11 56.52 0.40 -6.20 16 14 H -0.27 -6.16 7.11 56.52 0.40 -5.76 16 15 C 0.25 4.13 6.30 -83.76 -0.53 3.60 16 16 C -0.17 -2.84 7.94 -39.39 -0.31 -3.15 16 17 C -0.06 -0.93 9.82 -39.58 -0.39 -1.32 16 18 C -0.11 -1.57 6.32 -39.48 -0.25 -1.82 16 19 Cl -0.10 -1.32 28.95 -51.86 -1.50 -2.82 16 20 C -0.06 -0.90 9.82 -39.58 -0.39 -1.29 16 21 C -0.20 -3.03 9.21 -39.39 -0.36 -3.39 16 22 H 0.04 0.52 8.14 -51.93 -0.42 0.09 16 23 H 0.06 0.81 6.20 -51.93 -0.32 0.49 16 24 H 0.07 0.99 8.07 -51.93 -0.42 0.57 16 25 H 0.07 1.28 8.07 -51.93 -0.42 0.86 16 26 H 0.07 1.21 6.19 -51.93 -0.32 0.89 16 27 H 0.34 7.60 7.32 45.56 0.33 7.93 16 28 H 0.26 7.19 8.31 -40.82 -0.34 6.86 16 29 H 0.13 2.19 4.66 -52.49 -0.24 1.95 16 30 H 0.13 1.68 8.06 -52.48 -0.42 1.26 16 31 H 0.12 1.46 8.06 -52.49 -0.42 1.04 16 32 H 0.12 1.61 6.14 -52.49 -0.32 1.29 16 LS Contribution 283.80 15.07 4.28 4.28 Total: -1.00 -29.36 283.80 -7.54 -36.90 By element: Atomic # 1 Polarization: 10.32 SS G_CDS: -2.95 Total: 7.37 kcal Atomic # 6 Polarization: -9.83 SS G_CDS: -2.12 Total: -11.96 kcal Atomic # 7 Polarization: -35.29 SS G_CDS: 0.18 Total: -35.11 kcal Atomic # 8 Polarization: -13.75 SS G_CDS: -0.40 Total: -14.15 kcal Atomic # 14 Polarization: 20.51 SS G_CDS: -5.02 Total: 15.49 kcal Atomic # 17 Polarization: -1.32 SS G_CDS: -1.50 Total: -2.82 kcal Total LS contribution 4.28 Total: 4.28 kcal Total: -29.36 -7.54 -36.90 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261360787.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.902 kcal (2) G-P(sol) polarization free energy of solvation -29.362 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.460 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.540 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.901 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.000 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds