Wall clock time and date at job start Mon Mar 30 2020 07:09:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 N 1.46898 * 109.47236 * 2 1 4 4 C 1.46901 * 111.00238 * 158.41130 * 3 2 1 5 5 C 1.50703 * 109.47072 * 287.23838 * 4 3 2 6 6 H 1.08005 * 120.00171 * 354.49939 * 5 4 3 7 7 C 1.37878 * 120.00224 * 174.49912 * 5 4 3 8 8 N 1.31515 * 120.00026 * 359.97438 * 7 5 4 9 9 Si 1.86804 * 120.00228 * 180.02562 * 7 5 4 10 10 H 1.48501 * 109.46836 * 59.99629 * 9 7 5 11 11 H 1.48493 * 109.47006 * 179.97438 * 9 7 5 12 12 H 1.48497 * 109.46921 * 299.99925 * 9 7 5 13 13 C 1.39573 * 111.00327 * 282.36599 * 3 2 1 14 14 C 1.39991 * 120.88746 * 116.33876 * 13 3 2 15 15 N 1.40063 * 120.50946 * 0.02562 * 14 13 3 16 16 C 1.38481 * 118.97195 * 180.24496 * 14 13 3 17 17 N 1.32029 * 120.76162 * 359.45327 * 16 14 13 18 18 C 1.31919 * 121.95546 * 0.28445 * 17 16 14 19 19 C 1.38195 * 120.95306 * 359.97438 * 18 17 16 20 20 Cl 1.73600 * 120.43658 * 179.97438 * 19 18 17 21 21 H 1.09003 * 109.46959 * 305.23529 * 1 2 3 22 22 H 1.09002 * 109.47056 * 65.23305 * 1 2 3 23 23 H 1.08992 * 109.47378 * 185.23654 * 1 2 3 24 24 H 1.08994 * 109.46875 * 240.00123 * 2 1 3 25 25 H 1.08997 * 109.47016 * 119.99924 * 2 1 3 26 26 H 1.08999 * 109.46648 * 47.23266 * 4 3 2 27 27 H 1.08997 * 109.47368 * 167.23782 * 4 3 2 28 28 H 0.96997 * 120.00172 * 179.97438 * 8 7 5 29 29 H 0.97004 * 119.99381 * 180.24571 * 15 14 13 30 30 H 0.96998 * 120.00726 * 0.23837 * 15 14 13 31 31 H 1.07993 * 119.61769 * 179.73780 * 16 14 13 32 32 H 1.07995 * 119.52210 * 180.02562 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0197 1.3850 0.0000 4 6 3.3975 1.4563 0.5046 5 6 3.3992 1.2297 1.9945 6 1 2.4645 1.1392 2.5280 7 6 4.5939 1.1379 2.6766 8 7 5.7321 1.2475 2.0269 9 14 4.5959 0.8563 4.5233 10 1 3.9086 -0.4239 4.8295 11 1 5.9964 0.7953 5.0131 12 1 3.8843 1.9732 5.1950 13 6 1.9234 1.9496 -1.2728 14 6 1.0867 3.0464 -1.5109 15 7 0.3278 3.6006 -0.4723 16 6 1.0176 3.5721 -2.7902 17 7 1.7358 3.0576 -3.7714 18 6 2.5387 2.0280 -3.5833 19 6 2.6620 1.4409 -2.3383 20 17 3.7222 0.0860 -2.1060 21 1 -0.3633 0.5929 0.8394 22 1 -0.3633 0.4305 -0.9332 23 1 -0.3634 -1.0233 0.0938 24 1 1.8933 -0.5138 -0.8900 25 1 1.8933 -0.5138 0.8900 26 1 4.0020 0.6896 0.0199 27 1 3.8140 2.4395 0.2862 28 1 6.5726 1.1833 2.5068 29 1 -0.2522 4.3584 -0.6465 30 1 0.3820 3.2266 0.4210 31 1 0.3724 4.4155 -2.9865 32 1 3.1086 1.6388 -4.4140 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000393729423.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:09:26 Heat of formation + Delta-G solvation = 37.382304 kcal Electronic energy + Delta-G solvation = -17201.898713 eV Core-core repulsion = 14416.377919 eV Total energy + Delta-G solvation = -2785.520794 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.083 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -40.17673 -37.02733 -36.09232 -34.43654 -32.69473 -31.00289 -29.64521 -28.58880 -26.28099 -23.40189 -22.46475 -22.31590 -20.41787 -17.45939 -17.00986 -16.26022 -15.98477 -15.02895 -14.80018 -14.25710 -14.24787 -14.01445 -13.57405 -13.26479 -12.66038 -12.20082 -11.98393 -11.78914 -11.32258 -11.05591 -10.95312 -10.84217 -10.70302 -10.33090 -10.19014 -10.06670 -9.44138 -9.29862 -8.59408 -8.45336 -7.46380 -7.35045 -6.04470 -4.06771 1.34250 1.68978 2.47644 3.30165 3.35120 3.36910 4.05314 4.12252 4.34656 4.59363 4.85607 5.19232 5.30130 5.47005 5.57025 5.66181 5.76812 5.90698 6.06117 6.32541 6.34310 6.61154 6.69114 6.72949 7.17943 7.38547 7.58511 7.78188 7.98675 8.05437 8.11377 8.24562 8.49432 8.99572 9.56463 11.05330 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.023467 B = 0.007747 C = 0.007079 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1192.860942 B = 3613.428001 C = 3954.548674 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C 0.050 3.950 3 N -0.498 5.498 4 C 0.186 3.814 5 C -0.509 4.509 6 H 0.062 0.938 7 C 0.058 3.942 8 N -0.894 5.894 9 Si 0.897 3.103 10 H -0.277 1.277 11 H -0.288 1.288 12 H -0.277 1.277 13 C 0.088 3.912 14 C 0.196 3.804 15 N -0.854 5.854 16 C 0.014 3.986 17 N -0.444 5.444 18 C 0.047 3.953 19 C -0.076 4.076 20 Cl -0.043 7.043 21 H 0.058 0.942 22 H 0.040 0.960 23 H 0.050 0.950 24 H 0.040 0.960 25 H 0.089 0.911 26 H 0.029 0.971 27 H 0.021 0.979 28 H 0.262 0.738 29 H 0.395 0.605 30 H 0.414 0.586 31 H 0.153 0.847 32 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.367 0.930 -7.260 11.888 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C -0.076 4.076 3 N -0.220 5.220 4 C 0.062 3.938 5 C -0.548 4.548 6 H 0.080 0.920 7 C -0.144 4.144 8 N -0.533 5.533 9 Si 0.725 3.275 10 H -0.203 1.203 11 H -0.214 1.214 12 H -0.203 1.203 13 C -0.020 4.020 14 C 0.086 3.914 15 N -0.393 5.393 16 C -0.148 4.148 17 N -0.152 5.152 18 C -0.114 4.114 19 C -0.108 4.108 20 Cl -0.014 7.014 21 H 0.077 0.923 22 H 0.059 0.941 23 H 0.069 0.931 24 H 0.058 0.942 25 H 0.107 0.893 26 H 0.047 0.953 27 H 0.039 0.961 28 H 0.072 0.928 29 H 0.222 0.778 30 H 0.245 0.755 31 H 0.170 0.830 32 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -9.405 1.419 -7.686 12.229 hybrid contribution 0.661 -0.828 1.663 1.972 sum -8.744 0.591 -6.023 10.634 Atomic orbital electron populations 1.21763 0.96486 1.00516 1.01160 1.22194 0.94320 0.88747 1.02355 1.59701 1.28176 1.18305 1.15827 1.20084 0.80486 0.97629 0.95553 1.21053 0.92447 1.49277 0.91979 0.91959 1.24965 0.95479 0.95525 0.98458 1.69954 0.97313 1.50146 1.35875 0.86580 0.76872 0.78717 0.85321 1.20291 1.21379 1.20286 1.18826 0.96490 0.95971 0.90707 1.18694 0.91269 0.91744 0.89705 1.42361 1.48697 1.37339 1.10913 1.22113 1.02824 1.02501 0.87408 1.67559 1.05101 1.09238 1.33337 1.22245 0.99740 0.94642 0.94798 1.22932 0.97207 0.94058 0.96576 1.98371 1.63469 1.42882 1.96641 0.92323 0.94076 0.93134 0.94234 0.89266 0.95275 0.96108 0.92842 0.77773 0.75491 0.83008 0.82935 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.19 9.98 37.16 0.37 -1.82 16 2 C 0.05 0.95 5.15 -3.82 -0.02 0.93 16 3 N -0.50 -10.15 3.62 -172.05 -0.62 -10.78 16 4 C 0.19 4.65 4.04 -4.97 -0.02 4.63 16 5 C -0.51 -13.73 8.34 -34.44 -0.29 -14.02 16 6 H 0.06 1.65 7.81 -52.48 -0.41 1.24 16 7 C 0.06 1.59 5.46 -17.82 -0.10 1.50 16 8 N -0.89 -26.09 13.29 55.43 0.74 -25.36 16 9 Si 0.90 21.21 29.54 -169.99 -5.02 16.19 16 10 H -0.28 -6.44 7.11 56.52 0.40 -6.04 16 11 H -0.29 -6.80 7.11 56.52 0.40 -6.40 16 12 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 13 C 0.09 1.66 4.17 -83.29 -0.35 1.31 16 14 C 0.20 3.15 6.81 -83.35 -0.57 2.58 16 15 N -0.85 -11.29 9.10 32.62 0.30 -10.99 16 16 C 0.01 0.21 11.05 -17.38 -0.19 0.02 16 17 N -0.44 -7.21 10.36 -13.15 -0.14 -7.35 16 18 C 0.05 0.78 10.97 -17.53 -0.19 0.58 16 19 C -0.08 -1.38 5.86 -39.21 -0.23 -1.61 16 20 Cl -0.04 -0.79 23.26 -51.86 -1.21 -2.00 16 21 H 0.06 0.90 8.14 -51.93 -0.42 0.47 16 22 H 0.04 0.63 7.90 -51.93 -0.41 0.22 16 23 H 0.05 0.69 8.14 -51.93 -0.42 0.27 16 24 H 0.04 0.74 5.28 -51.93 -0.27 0.47 16 25 H 0.09 1.85 7.14 -51.93 -0.37 1.48 16 26 H 0.03 0.77 5.34 -51.93 -0.28 0.49 16 27 H 0.02 0.58 7.96 -51.93 -0.41 0.17 16 28 H 0.26 7.29 8.31 -40.82 -0.34 6.95 16 29 H 0.39 3.81 8.86 -40.82 -0.36 3.44 16 30 H 0.41 6.02 8.22 -40.82 -0.34 5.68 16 31 H 0.15 1.73 8.06 -52.49 -0.42 1.31 16 32 H 0.15 2.16 8.06 -52.49 -0.42 1.74 16 LS Contribution 281.54 15.07 4.24 4.24 Total: -1.00 -29.54 281.54 -6.97 -36.51 By element: Atomic # 1 Polarization: 9.10 SS G_CDS: -3.68 Total: 5.42 kcal Atomic # 6 Polarization: -4.31 SS G_CDS: -1.58 Total: -5.90 kcal Atomic # 7 Polarization: -54.75 SS G_CDS: 0.27 Total: -54.47 kcal Atomic # 14 Polarization: 21.21 SS G_CDS: -5.02 Total: 16.19 kcal Atomic # 17 Polarization: -0.79 SS G_CDS: -1.21 Total: -2.00 kcal Total LS contribution 4.24 Total: 4.24 kcal Total: -29.54 -6.97 -36.51 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000393729423.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 73.892 kcal (2) G-P(sol) polarization free energy of solvation -29.538 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.354 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.972 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.509 kcal (6) G-S(sol) free energy of system = (1) + (5) 37.382 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds