Wall clock time and date at job start Mon Mar 30 2020 06:59:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.50706 * 109.47238 * 2 1 4 4 C 1.38112 * 120.39098 * 124.99763 * 3 2 1 5 5 C 1.39628 * 118.36295 * 179.97438 * 4 3 2 6 6 N 1.38539 * 120.51881 * 179.97438 * 5 4 3 7 7 C 1.46494 * 120.00495 * 4.99469 * 6 5 4 8 8 C 1.46499 * 119.99570 * 185.00259 * 6 5 4 9 9 C 1.50708 * 109.47327 * 89.99494 * 8 6 5 10 10 H 1.07994 * 119.99682 * 0.02562 * 9 8 6 11 11 C 1.37873 * 119.99826 * 180.02562 * 9 8 6 12 12 N 1.31516 * 120.00484 * 359.97438 * 11 9 8 13 13 Si 1.86801 * 119.99944 * 180.02562 * 11 9 8 14 14 H 1.48500 * 109.47068 * 59.99755 * 13 11 9 15 15 H 1.48495 * 109.47380 * 179.97438 * 13 11 9 16 16 H 1.48500 * 109.46876 * 299.99845 * 13 11 9 17 17 N 1.32973 * 118.95311 * 0.02562 * 5 4 3 18 18 C 1.31875 * 120.67714 * 359.97438 * 17 5 4 19 19 Cl 1.73599 * 119.10555 * 179.97438 * 18 17 5 20 20 N 1.31927 * 121.79394 * 359.74313 * 18 17 5 21 21 H 1.09002 * 109.47153 * 179.97438 * 1 2 3 22 22 H 1.09001 * 109.46832 * 299.99686 * 1 2 3 23 23 H 1.09004 * 109.47261 * 59.99705 * 1 2 3 24 24 H 1.09001 * 109.46832 * 240.00314 * 2 1 3 25 25 H 1.09000 * 109.47611 * 120.00611 * 2 1 3 26 26 H 1.07996 * 120.81879 * 359.96357 * 4 3 2 27 27 H 1.09005 * 109.46789 * 90.00557 * 7 6 5 28 28 H 1.09000 * 109.47387 * 209.99991 * 7 6 5 29 29 H 1.09000 * 109.47543 * 330.00777 * 7 6 5 30 30 H 1.08995 * 109.47436 * 209.99441 * 8 6 5 31 31 H 1.09005 * 109.47315 * 329.99673 * 8 6 5 32 32 H 0.96996 * 120.00564 * 179.97438 * 12 11 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0324 1.4209 0.0000 4 6 2.9095 1.8518 0.9759 5 6 3.3483 3.1767 0.9351 6 7 4.2279 3.6563 1.8921 7 6 4.7902 2.7455 2.8923 8 6 4.5955 5.0743 1.9038 9 6 3.6292 5.8367 2.7735 10 1 2.8222 5.3168 3.2682 11 6 3.7754 7.1978 2.9374 12 7 4.7584 7.8309 2.3353 13 14 2.5780 8.1426 4.0158 14 1 2.6297 7.6070 5.3999 15 1 2.9506 9.5800 4.0277 16 1 1.2022 7.9918 3.4778 17 7 2.9080 3.9711 -0.0361 18 6 2.0703 3.5178 -0.9482 19 17 1.5209 4.5906 -2.1976 20 7 1.6419 2.2701 -0.9397 21 1 -0.3633 -1.0277 -0.0005 22 1 -0.3633 0.5138 0.8900 23 1 -0.3634 0.5139 -0.8900 24 1 1.8933 -0.5138 -0.8900 25 1 1.8934 -0.5139 0.8899 26 1 3.2474 1.1807 1.7516 27 1 5.7198 2.3199 2.5142 28 1 4.9898 3.2947 3.8124 29 1 4.0795 1.9441 3.0943 30 1 5.6051 5.1847 2.2995 31 1 4.5583 5.4678 0.8880 32 1 4.8611 8.7885 2.4503 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000692615120.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:59:15 Heat of formation + Delta-G solvation = 41.233437 kcal Electronic energy + Delta-G solvation = -16553.793516 eV Core-core repulsion = 13768.439720 eV Total energy + Delta-G solvation = -2785.353796 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.083 amu Computer time = 1.83 seconds Orbital eigenvalues (eV) -40.53057 -36.82044 -36.33949 -34.42685 -32.80689 -31.44165 -30.25520 -27.94450 -26.02742 -24.49580 -23.09016 -22.45429 -20.29275 -17.28495 -16.88337 -16.48740 -15.41514 -15.01061 -14.78990 -14.54447 -14.15164 -13.81931 -13.52702 -13.32102 -12.38731 -12.20090 -11.81594 -11.55501 -11.45331 -11.28079 -11.15440 -10.98801 -10.96529 -10.67486 -10.45888 -10.29014 -10.08337 -9.58812 -9.07962 -8.66223 -8.47302 -7.23992 -6.08245 -4.14889 1.36164 1.81878 1.90383 3.28442 3.33330 3.35884 3.60387 4.21964 4.39604 4.44624 4.92427 5.16809 5.24685 5.28240 5.34850 5.37714 5.61693 5.65964 5.80080 5.82026 5.91304 6.09540 6.11509 6.27954 6.45897 6.87770 7.30030 7.43543 7.75344 7.95508 8.05570 8.15493 8.64223 8.88719 9.49856 10.98382 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.019851 B = 0.006735 C = 0.005850 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1410.174774 B = 4156.503992 C = 4784.937065 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C -0.067 4.067 3 C 0.209 3.791 4 C -0.310 4.310 5 C 0.464 3.536 6 N -0.572 5.572 7 C 0.093 3.907 8 C 0.247 3.753 9 C -0.529 4.529 10 H 0.055 0.945 11 C 0.065 3.935 12 N -0.892 5.892 13 Si 0.897 3.103 14 H -0.277 1.277 15 H -0.285 1.285 16 H -0.276 1.276 17 N -0.548 5.548 18 C 0.410 3.590 19 Cl 0.005 6.995 20 N -0.567 5.567 21 H 0.056 0.944 22 H 0.052 0.948 23 H 0.067 0.933 24 H 0.084 0.916 25 H 0.079 0.921 26 H 0.141 0.859 27 H 0.049 0.951 28 H 0.080 0.920 29 H 0.061 0.939 30 H 0.033 0.967 31 H 0.054 0.946 32 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.728 -13.906 -3.058 14.718 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.105 4.105 3 C 0.068 3.932 4 C -0.340 4.340 5 C 0.218 3.782 6 N -0.279 5.279 7 C -0.050 4.050 8 C 0.128 3.872 9 C -0.568 4.568 10 H 0.073 0.927 11 C -0.138 4.138 12 N -0.530 5.530 13 Si 0.724 3.276 14 H -0.203 1.203 15 H -0.211 1.211 16 H -0.202 1.202 17 N -0.275 5.275 18 C 0.114 3.886 19 Cl 0.033 6.967 20 N -0.292 5.292 21 H 0.075 0.925 22 H 0.071 0.929 23 H 0.086 0.914 24 H 0.102 0.898 25 H 0.098 0.902 26 H 0.159 0.841 27 H 0.067 0.933 28 H 0.099 0.901 29 H 0.080 0.920 30 H 0.051 0.949 31 H 0.072 0.928 32 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -3.774 -12.918 -3.665 13.948 hybrid contribution -0.353 0.399 1.184 1.299 sum -4.127 -12.519 -2.481 13.413 Atomic orbital electron populations 1.21655 0.93980 1.01452 1.02972 1.20450 0.97090 0.89884 1.03096 1.21066 0.89409 0.95099 0.87645 1.21965 1.08628 0.97475 1.05900 1.18334 0.86218 0.87383 0.86215 1.47177 1.42502 1.11703 1.26511 1.21705 0.97403 0.93621 0.92307 1.19470 0.95566 0.72677 0.99487 1.21341 1.13253 0.92850 1.29362 0.92673 1.24893 0.95592 0.97355 0.95917 1.69911 1.30684 1.09557 1.42895 0.86578 0.81530 0.78785 0.80662 1.20283 1.21063 1.20178 1.67375 1.16671 1.38444 1.05020 1.22373 0.90040 0.86872 0.89344 1.98391 1.87486 1.62444 1.48418 1.67541 1.30634 1.02718 1.28325 0.92450 0.92856 0.91365 0.89776 0.90203 0.84133 0.93293 0.90124 0.92015 0.94904 0.92816 0.92563 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.52 9.78 37.16 0.36 -1.15 16 2 C -0.07 -0.75 6.36 -27.88 -0.18 -0.92 16 3 C 0.21 3.30 6.19 -82.33 -0.51 2.79 16 4 C -0.31 -5.15 8.95 -39.11 -0.35 -5.50 16 5 C 0.46 9.58 7.39 -154.79 -1.14 8.44 16 6 N -0.57 -11.98 2.96 -182.93 -0.54 -12.52 16 7 C 0.09 1.45 10.30 59.84 0.62 2.07 16 8 C 0.25 6.27 5.23 -5.19 -0.03 6.25 16 9 C -0.53 -14.66 9.39 -34.44 -0.32 -14.98 16 10 H 0.06 1.54 7.81 -52.49 -0.41 1.13 16 11 C 0.07 1.83 5.46 -17.82 -0.10 1.73 16 12 N -0.89 -26.03 13.29 55.43 0.74 -25.29 16 13 Si 0.90 21.67 29.54 -169.99 -5.02 16.65 16 14 H -0.28 -6.52 7.11 56.52 0.40 -6.12 16 15 H -0.29 -6.78 7.11 56.52 0.40 -6.37 16 16 H -0.28 -6.74 7.11 56.52 0.40 -6.34 16 17 N -0.55 -12.37 9.20 -10.87 -0.10 -12.47 16 18 C 0.41 8.28 8.18 -91.97 -0.75 7.52 16 19 Cl 0.00 0.09 29.27 -51.86 -1.52 -1.43 16 20 N -0.57 -10.27 10.01 -7.97 -0.08 -10.35 16 21 H 0.06 0.47 8.14 -51.93 -0.42 0.05 16 22 H 0.05 0.60 8.14 -51.93 -0.42 0.18 16 23 H 0.07 0.81 7.98 -51.93 -0.41 0.40 16 24 H 0.08 0.85 8.14 -51.93 -0.42 0.43 16 25 H 0.08 0.72 7.93 -51.93 -0.41 0.30 16 26 H 0.14 1.87 6.10 -52.49 -0.32 1.55 16 27 H 0.05 0.66 8.14 -51.93 -0.42 0.24 16 28 H 0.08 1.27 8.07 -51.93 -0.42 0.85 16 29 H 0.06 0.80 6.05 -51.93 -0.31 0.49 16 30 H 0.03 0.85 8.07 -51.93 -0.42 0.43 16 31 H 0.05 1.52 7.33 -51.93 -0.38 1.14 16 32 H 0.26 7.33 8.31 -40.82 -0.34 6.99 16 LS Contribution 293.05 15.07 4.42 4.42 Total: -1.00 -30.98 293.05 -8.42 -39.40 By element: Atomic # 1 Polarization: -0.73 SS G_CDS: -3.92 Total: -4.65 kcal Atomic # 6 Polarization: 8.64 SS G_CDS: -2.40 Total: 6.24 kcal Atomic # 7 Polarization: -60.65 SS G_CDS: 0.02 Total: -60.63 kcal Atomic # 14 Polarization: 21.67 SS G_CDS: -5.02 Total: 16.65 kcal Atomic # 17 Polarization: 0.09 SS G_CDS: -1.52 Total: -1.43 kcal Total LS contribution 4.42 Total: 4.42 kcal Total: -30.98 -8.42 -39.40 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000692615120.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.633 kcal (2) G-P(sol) polarization free energy of solvation -30.976 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.657 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.423 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.399 kcal (6) G-S(sol) free energy of system = (1) + (5) 41.233 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.83 seconds