Wall clock time and date at job start Mon Mar 30 2020 07:07:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09001 * 109.47427 * 2 1 4 4 C 1.50698 * 109.47469 * 239.99155 * 2 1 3 5 5 H 1.07991 * 120.00236 * 240.00550 * 4 2 1 6 6 C 1.37879 * 119.99333 * 60.00157 * 4 2 1 7 7 N 1.31511 * 120.00262 * 0.02562 * 6 4 2 8 8 Si 1.86807 * 119.99504 * 180.02562 * 6 4 2 9 9 H 1.48502 * 109.46985 * 60.00092 * 8 6 4 10 10 H 1.48499 * 109.46853 * 180.02562 * 8 6 4 11 11 H 1.48504 * 109.47052 * 299.99954 * 8 6 4 12 12 N 1.46904 * 109.46717 * 119.99181 * 2 1 3 13 13 C 1.46897 * 110.99972 * 176.04482 * 12 2 1 14 14 C 1.39514 * 111.00549 * 300.00238 * 12 2 1 15 15 C 1.39285 * 120.87123 * 300.00172 * 14 12 2 16 16 C 1.38003 * 119.17139 * 179.97438 * 15 14 12 17 17 N 1.31981 * 120.98106 * 0.02562 * 16 15 14 18 18 C 1.32077 * 121.93010 * 359.97438 * 17 16 15 19 19 Cl 1.73598 * 119.64082 * 179.97438 * 18 17 16 20 20 C 1.38633 * 120.71363 * 0.02562 * 18 17 16 21 21 N 1.40151 * 120.52629 * 179.97438 * 20 18 17 22 22 H 1.08993 * 109.47729 * 180.02562 * 1 2 3 23 23 H 1.09001 * 109.47194 * 300.00900 * 1 2 3 24 24 H 1.09000 * 109.46947 * 60.00349 * 1 2 3 25 25 H 0.97001 * 119.99599 * 180.02562 * 7 6 4 26 26 H 1.09001 * 109.47466 * 183.95779 * 13 12 2 27 27 H 1.09004 * 109.47465 * 303.95918 * 13 12 2 28 28 H 1.09004 * 109.47113 * 63.95407 * 13 12 2 29 29 H 1.08004 * 120.41765 * 359.70191 * 15 14 12 30 30 H 1.08005 * 119.50878 * 179.97438 * 16 15 14 31 31 H 0.96996 * 120.00098 * 180.02562 * 21 20 18 32 32 H 0.97004 * 119.99185 * 0.02562 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 6 2.0324 -0.7106 -1.2303 5 1 2.6532 -1.5886 -1.1311 6 6 1.6993 -0.2396 -2.4826 7 7 0.9436 0.8300 -2.6034 8 14 2.3215 -1.1208 -4.0078 9 1 1.8259 -2.5206 -4.0074 10 1 1.8271 -0.4204 -5.2203 11 1 3.8065 -1.1213 -4.0079 12 7 2.0196 -0.6924 1.1996 13 6 3.4849 -0.7945 1.1873 14 6 1.5722 -0.0597 2.3598 15 6 1.9014 1.2681 2.6221 16 6 1.4395 1.8594 3.7803 17 7 0.6948 1.1857 4.6368 18 6 0.3582 -0.0744 4.4293 19 17 -0.6234 -0.9041 5.5962 20 6 0.7812 -0.7420 3.2903 21 7 0.4221 -2.0794 3.0744 22 1 -0.3634 -1.0276 0.0005 23 1 -0.3634 0.5140 0.8899 24 1 -0.3633 0.5138 -0.8900 25 1 0.7090 1.1610 -3.4845 26 1 3.8162 -1.3720 2.0503 27 1 3.8069 -1.2915 0.2722 28 1 3.9191 0.2044 1.2301 29 1 2.5141 1.8265 1.9299 30 1 1.6918 2.8886 3.9893 31 1 0.7226 -2.5393 2.2750 32 1 -0.1270 -2.5451 3.7245 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000710575997.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:07:32 Heat of formation + Delta-G solvation = 38.091824 kcal Electronic energy + Delta-G solvation = -17106.069791 eV Core-core repulsion = 14320.579764 eV Total energy + Delta-G solvation = -2785.490027 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.083 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -40.19445 -37.14662 -36.23565 -34.56361 -32.99727 -30.45188 -29.26653 -28.53938 -25.69639 -24.47335 -22.87324 -22.15417 -19.90385 -17.44524 -16.99926 -16.18528 -16.09538 -15.23518 -14.75026 -14.30939 -14.15724 -13.68326 -13.62025 -13.12653 -12.44933 -12.07303 -11.87542 -11.39812 -11.14905 -11.10669 -11.04474 -10.90200 -10.81019 -10.34380 -10.24768 -10.13719 -9.39423 -9.10512 -8.80963 -8.54639 -7.61674 -7.30882 -6.12837 -4.19110 1.37861 1.69976 2.11708 3.24578 3.30187 3.31788 4.03583 4.09617 4.28802 4.58843 5.08186 5.17036 5.20305 5.50470 5.65709 5.85475 6.04838 6.13329 6.49565 6.58111 6.70036 6.73328 6.94845 7.01203 7.31634 7.48129 7.66555 7.72851 7.93608 8.05229 8.15640 8.16667 8.45271 8.85276 9.46433 10.93715 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.036505 B = 0.005853 C = 0.005681 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 766.843202 B = 4782.371988 C = 4927.887717 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 C 0.220 3.780 3 H 0.007 0.993 4 C -0.511 4.511 5 H 0.065 0.935 6 C 0.062 3.938 7 N -0.890 5.890 8 Si 0.899 3.101 9 H -0.276 1.276 10 H -0.287 1.287 11 H -0.277 1.277 12 N -0.504 5.504 13 C 0.042 3.958 14 C 0.097 3.903 15 C -0.152 4.152 16 C 0.059 3.941 17 N -0.453 5.453 18 C 0.089 3.911 19 Cl -0.053 7.053 20 C 0.206 3.794 21 N -0.852 5.852 22 H 0.033 0.967 23 H 0.005 0.995 24 H 0.087 0.913 25 H 0.263 0.737 26 H 0.045 0.955 27 H 0.086 0.914 28 H 0.020 0.980 29 H 0.137 0.863 30 H 0.156 0.844 31 H 0.414 0.586 32 H 0.395 0.605 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.741 -2.468 10.364 10.680 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 C 0.116 3.884 3 H 0.024 0.976 4 C -0.550 4.550 5 H 0.083 0.917 6 C -0.140 4.140 7 N -0.528 5.528 8 Si 0.727 3.273 9 H -0.202 1.202 10 H -0.213 1.213 11 H -0.203 1.203 12 N -0.227 5.227 13 C -0.105 4.105 14 C -0.010 4.010 15 C -0.175 4.175 16 C -0.102 4.102 17 N -0.164 5.164 18 C -0.080 4.080 19 Cl -0.025 7.025 20 C 0.094 3.906 21 N -0.391 5.391 22 H 0.052 0.948 23 H 0.024 0.976 24 H 0.106 0.894 25 H 0.073 0.927 26 H 0.064 0.936 27 H 0.105 0.895 28 H 0.039 0.961 29 H 0.155 0.845 30 H 0.173 0.827 31 H 0.246 0.754 32 H 0.224 0.776 Dipole moment (debyes) X Y Z Total from point charges 0.094 -2.504 11.028 11.309 hybrid contribution 0.614 -0.349 -1.587 1.737 sum 0.708 -2.853 9.441 9.888 Atomic orbital electron populations 1.21779 0.97403 0.99590 1.00046 1.19384 0.92488 0.92125 0.84436 0.97557 1.21052 1.31735 1.12659 0.89535 0.91699 1.24922 0.95014 0.95008 0.99062 1.69878 1.36364 1.22778 1.23797 0.86549 0.79087 0.79724 0.81975 1.20192 1.21301 1.20262 1.59667 1.10311 1.52190 1.00508 1.22280 0.86476 0.99648 1.02101 1.18736 0.97923 0.91155 0.93226 1.22653 1.00672 0.95861 0.98338 1.22074 0.97464 0.99579 0.91056 1.66736 1.11833 1.06036 1.31777 1.20681 1.03890 0.91812 0.91649 1.98329 1.69051 1.75958 1.59163 1.18204 0.93815 0.86761 0.91781 1.42484 1.59081 1.09412 1.28166 0.94793 0.97620 0.89412 0.92721 0.93600 0.89539 0.96112 0.84533 0.82725 0.75400 0.77606 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -3.09 8.85 37.16 0.33 -2.76 16 2 C 0.22 5.17 1.85 -68.86 -0.13 5.04 16 3 H 0.01 0.18 7.21 -51.93 -0.37 -0.20 16 4 C -0.51 -13.00 7.88 -34.44 -0.27 -13.27 16 5 H 0.06 1.62 6.40 -52.49 -0.34 1.28 16 6 C 0.06 1.62 5.30 -17.82 -0.09 1.53 16 7 N -0.89 -24.30 11.32 55.43 0.63 -23.67 16 8 Si 0.90 20.30 29.54 -169.99 -5.02 15.28 16 9 H -0.28 -6.21 7.11 56.52 0.40 -5.81 16 10 H -0.29 -6.52 7.11 56.52 0.40 -6.11 16 11 H -0.28 -6.17 7.11 56.52 0.40 -5.77 16 12 N -0.50 -9.95 3.90 -172.29 -0.67 -10.63 16 13 C 0.04 0.75 9.11 60.06 0.55 1.30 16 14 C 0.10 1.79 3.35 -83.35 -0.28 1.51 16 15 C -0.15 -2.62 8.68 -39.28 -0.34 -2.96 16 16 C 0.06 0.94 11.17 -17.57 -0.20 0.74 16 17 N -0.45 -7.79 10.34 -10.30 -0.11 -7.90 16 18 C 0.09 1.49 7.29 -17.30 -0.13 1.37 16 19 Cl -0.05 -0.75 27.75 -51.86 -1.44 -2.19 16 20 C 0.21 3.52 6.80 -83.28 -0.57 2.95 16 21 N -0.85 -12.49 9.06 32.65 0.30 -12.19 16 22 H 0.03 0.79 8.14 -51.93 -0.42 0.37 16 23 H 0.00 0.11 7.22 -51.93 -0.37 -0.26 16 24 H 0.09 2.30 6.07 -51.93 -0.32 1.98 16 25 H 0.26 6.90 8.31 -40.82 -0.34 6.56 16 26 H 0.05 0.73 8.14 -51.93 -0.42 0.30 16 27 H 0.09 1.63 6.10 -51.93 -0.32 1.31 16 28 H 0.02 0.36 7.42 -51.93 -0.39 -0.02 16 29 H 0.14 2.28 7.18 -52.48 -0.38 1.91 16 30 H 0.16 1.95 8.06 -52.48 -0.42 1.53 16 31 H 0.41 6.25 8.22 -40.82 -0.34 5.91 16 32 H 0.39 4.92 7.52 -40.82 -0.31 4.61 16 LS Contribution 279.49 15.07 4.21 4.21 Total: -1.00 -27.30 279.49 -6.75 -34.05 By element: Atomic # 1 Polarization: 11.12 SS G_CDS: -3.52 Total: 7.59 kcal Atomic # 6 Polarization: -3.43 SS G_CDS: -1.13 Total: -4.56 kcal Atomic # 7 Polarization: -54.53 SS G_CDS: 0.15 Total: -54.39 kcal Atomic # 14 Polarization: 20.30 SS G_CDS: -5.02 Total: 15.28 kcal Atomic # 17 Polarization: -0.75 SS G_CDS: -1.44 Total: -2.19 kcal Total LS contribution 4.21 Total: 4.21 kcal Total: -27.30 -6.75 -34.05 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000710575997.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 72.143 kcal (2) G-P(sol) polarization free energy of solvation -27.298 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.846 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.754 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.051 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.092 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds