Wall clock time and date at job start Mon Mar 30 2020 07:03:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31514 * 1 3 3 Si 1.86807 * 119.99925 * 2 1 4 4 H 1.48497 * 109.46964 * 269.99748 * 3 2 1 5 5 H 1.48502 * 109.47035 * 29.99580 * 3 2 1 6 6 H 1.48499 * 109.47257 * 149.99655 * 3 2 1 7 7 C 1.37875 * 120.00563 * 179.97438 * 2 1 3 8 8 H 1.08004 * 119.99491 * 359.97438 * 7 2 1 9 9 C 1.50696 * 120.00542 * 180.02562 * 7 2 1 10 10 C 1.52997 * 109.47242 * 180.02562 * 9 7 2 11 11 C 1.53006 * 109.47127 * 180.02562 * 10 9 7 12 12 N 1.46504 * 109.46883 * 180.02562 * 11 10 9 13 13 C 1.39912 * 119.99353 * 179.97438 * 12 11 10 14 14 C 1.38810 * 120.07122 * 359.72200 * 13 12 11 15 15 C 1.38163 * 119.96383 * 179.76571 * 14 13 12 16 16 C 1.38373 * 120.09597 * 0.51058 * 15 14 13 17 17 Cl 1.73597 * 119.93044 * 179.76152 * 16 15 14 18 18 C 1.38380 * 120.13255 * 359.74571 * 16 15 14 19 19 C 1.38284 * 120.04054 * 359.97438 * 18 16 15 20 20 F 1.35097 * 120.05006 * 179.97438 * 19 18 16 21 21 H 0.96999 * 120.00061 * 0.02562 * 1 2 3 22 22 H 1.08996 * 109.47390 * 60.00123 * 9 7 2 23 23 H 1.09001 * 109.46948 * 299.99764 * 9 7 2 24 24 H 1.09001 * 109.47502 * 60.00161 * 10 9 7 25 25 H 1.09001 * 109.47289 * 299.99957 * 10 9 7 26 26 H 1.09001 * 109.47002 * 299.99574 * 11 10 9 27 27 H 1.08993 * 109.46955 * 60.00011 * 11 10 9 28 28 H 0.96992 * 119.99966 * 359.97438 * 12 11 10 29 29 H 1.08000 * 120.01969 * 359.97438 * 14 13 12 30 30 H 1.07998 * 119.95092 * 180.25075 * 15 14 13 31 31 H 1.08000 * 119.97987 * 180.02562 * 18 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3151 0.0000 0.0000 3 14 2.2492 1.6178 0.0000 4 1 2.4967 2.0464 -1.4001 5 1 1.4465 2.6528 0.7000 6 1 3.5467 1.4403 0.7001 7 6 2.0046 -1.1940 0.0005 8 1 1.4646 -2.1293 0.0014 9 6 3.5116 -1.1940 0.0011 10 6 4.0216 -2.6364 0.0010 11 6 5.5517 -2.6364 0.0022 12 7 6.0400 -4.0176 0.0015 13 6 7.4156 -4.2732 0.0019 14 6 8.3188 -3.2192 -0.0029 15 6 9.6767 -3.4740 0.0023 16 6 10.1379 -4.7786 0.0017 17 17 11.8450 -5.0939 0.0021 18 6 9.2410 -5.8324 0.0011 19 6 7.8807 -5.5838 0.0017 20 9 7.0049 -6.6124 0.0006 21 1 -0.4850 0.8400 -0.0004 22 1 3.8746 -0.6800 0.8911 23 1 3.8752 -0.6803 -0.8889 24 1 3.6587 -3.1501 -0.8892 25 1 3.6580 -3.1505 0.8907 26 1 5.9157 -2.1223 -0.8873 27 1 5.9142 -2.1229 0.8927 28 1 5.4097 -4.7548 0.0008 29 1 7.9603 -2.2004 -0.0073 30 1 10.3793 -2.6538 0.0027 31 1 9.6036 -6.8497 0.0010 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000042221194.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:03:40 Heat of formation + Delta-G solvation = -43.175452 kcal Electronic energy + Delta-G solvation = -15845.624606 eV Core-core repulsion = 12873.546031 eV Total energy + Delta-G solvation = -2972.078575 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 257.068 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -48.92339 -39.46975 -36.98212 -35.95909 -33.68514 -31.81437 -30.86536 -29.14969 -26.63240 -23.84367 -22.59087 -21.64529 -20.39989 -18.07672 -17.26944 -16.82453 -16.46325 -15.83582 -15.28382 -14.97510 -14.69338 -14.20542 -13.98150 -13.58284 -13.38327 -12.78538 -12.68024 -12.44500 -11.96506 -11.63887 -11.60156 -11.20648 -11.04260 -10.96632 -10.21637 -10.03160 -9.82647 -9.77247 -9.30331 -9.12425 -8.61871 -7.49879 -6.11819 -4.11244 0.94594 1.08224 1.99063 3.25005 3.30154 3.33283 3.34837 3.37221 4.10550 4.37848 4.51596 4.78626 5.00506 5.21529 5.23829 5.39551 5.46301 5.52052 5.77608 5.82375 5.91721 6.02209 6.25326 6.31405 6.48845 6.66891 7.09413 7.13892 7.26359 7.58006 7.69304 8.44386 8.92101 9.49628 11.01516 Molecular weight = 257.07amu Principal moments of inertia in cm(-1) A = 0.039417 B = 0.003556 C = 0.003272 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 710.178232 B = 7872.129310 C = 8556.558499 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.902 5.902 2 C 0.067 3.933 3 Si 0.881 3.119 4 H -0.276 1.276 5 H -0.287 1.287 6 H -0.265 1.265 7 C -0.525 4.525 8 H 0.072 0.928 9 C -0.009 4.009 10 C -0.114 4.114 11 C 0.116 3.884 12 N -0.732 5.732 13 C 0.205 3.795 14 C -0.168 4.168 15 C -0.064 4.064 16 C -0.079 4.079 17 Cl -0.075 7.075 18 C -0.095 4.095 19 C 0.022 3.978 20 F -0.138 7.138 21 H 0.264 0.736 22 H 0.018 0.982 23 H 0.014 0.986 24 H 0.061 0.939 25 H 0.061 0.939 26 H 0.061 0.939 27 H 0.062 0.938 28 H 0.405 0.595 29 H 0.142 0.858 30 H 0.137 0.863 31 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 21.212 -8.794 0.023 22.962 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.540 5.540 2 C -0.135 4.135 3 Si 0.708 3.292 4 H -0.202 1.202 5 H -0.213 1.213 6 H -0.190 1.190 7 C -0.562 4.562 8 H 0.090 0.910 9 C -0.047 4.047 10 C -0.152 4.152 11 C -0.007 4.007 12 N -0.359 5.359 13 C 0.097 3.903 14 C -0.191 4.191 15 C -0.084 4.084 16 C -0.108 4.108 17 Cl -0.047 7.047 18 C -0.115 4.115 19 C -0.002 4.002 20 F -0.117 7.117 21 H 0.074 0.926 22 H 0.037 0.963 23 H 0.032 0.968 24 H 0.080 0.920 25 H 0.080 0.920 26 H 0.080 0.920 27 H 0.080 0.920 28 H 0.241 0.759 29 H 0.160 0.840 30 H 0.155 0.845 31 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 21.059 -8.516 0.026 22.716 hybrid contribution 0.035 0.383 -0.019 0.385 sum 21.094 -8.134 0.007 22.608 Atomic orbital electron populations 1.69909 1.06347 1.27027 1.50766 1.25040 0.94756 0.99253 0.94433 0.86760 0.80326 0.83534 0.78551 1.20224 1.21309 1.18983 1.21088 0.89286 0.94571 1.51301 0.91014 1.19492 0.97419 0.91258 0.96548 1.21687 0.90357 1.01124 1.02013 1.21756 0.96983 0.80991 1.01020 1.45061 1.02240 1.09265 1.79308 1.18026 0.86004 0.91753 0.94559 1.20560 0.91512 0.98529 1.08521 1.20847 0.95309 0.95018 0.97191 1.20207 0.84506 0.93949 1.12161 1.98349 1.12862 1.96083 1.97385 1.20673 0.90288 0.99863 1.00663 1.16872 0.86841 0.82718 1.13788 1.91467 1.68237 1.57161 1.94817 0.92620 0.96333 0.96771 0.92000 0.91985 0.92037 0.92020 0.75905 0.83988 0.84530 0.84093 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.90 -27.40 13.96 55.43 0.77 -26.62 16 2 C 0.07 1.90 5.47 -17.82 -0.10 1.80 16 3 Si 0.88 21.04 27.47 -169.99 -4.67 16.37 16 4 H -0.28 -6.48 7.11 56.52 0.40 -6.08 16 5 H -0.29 -6.84 7.11 56.52 0.40 -6.44 16 6 H -0.27 -6.00 6.54 56.52 0.37 -5.63 16 7 C -0.52 -14.50 9.66 -34.44 -0.33 -14.83 16 8 H 0.07 2.14 7.99 -52.48 -0.42 1.72 16 9 C -0.01 -0.21 4.04 -27.89 -0.11 -0.32 16 10 C -0.11 -2.03 5.27 -26.73 -0.14 -2.17 16 11 C 0.12 1.65 4.92 -4.04 -0.02 1.63 16 12 N -0.73 -9.67 5.74 -58.55 -0.34 -10.00 16 13 C 0.20 2.56 6.66 -83.65 -0.56 2.01 16 14 C -0.17 -1.86 9.31 -39.40 -0.37 -2.23 16 15 C -0.06 -0.64 9.82 -39.56 -0.39 -1.03 16 16 C -0.08 -0.82 6.32 -39.48 -0.25 -1.07 16 17 Cl -0.08 -0.72 28.95 -51.86 -1.50 -2.22 16 18 C -0.09 -1.02 9.80 -39.51 -0.39 -1.41 16 19 C 0.02 0.27 7.31 -39.26 -0.29 -0.02 16 20 F -0.14 -1.79 16.64 2.25 0.04 -1.75 16 21 H 0.26 7.49 8.31 -40.82 -0.34 7.15 16 22 H 0.02 0.41 7.20 -51.93 -0.37 0.04 16 23 H 0.01 0.31 7.57 -51.93 -0.39 -0.09 16 24 H 0.06 1.11 8.14 -51.93 -0.42 0.69 16 25 H 0.06 1.12 8.14 -51.93 -0.42 0.70 16 26 H 0.06 0.84 7.94 -51.93 -0.41 0.43 16 27 H 0.06 0.85 7.96 -51.93 -0.41 0.44 16 28 H 0.41 5.23 7.96 -40.82 -0.33 4.90 16 29 H 0.14 1.44 6.74 -52.49 -0.35 1.09 16 30 H 0.14 1.08 8.06 -52.49 -0.42 0.65 16 31 H 0.14 1.29 8.06 -52.49 -0.42 0.86 16 LS Contribution 286.16 15.07 4.31 4.31 Total: -1.00 -29.24 286.16 -7.87 -37.11 By element: Atomic # 1 Polarization: 3.99 SS G_CDS: -3.55 Total: 0.44 kcal Atomic # 6 Polarization: -14.70 SS G_CDS: -2.94 Total: -17.64 kcal Atomic # 7 Polarization: -37.07 SS G_CDS: 0.44 Total: -36.63 kcal Atomic # 9 Polarization: -1.79 SS G_CDS: 0.04 Total: -1.75 kcal Atomic # 14 Polarization: 21.04 SS G_CDS: -4.67 Total: 16.37 kcal Atomic # 17 Polarization: -0.72 SS G_CDS: -1.50 Total: -2.22 kcal Total LS contribution 4.31 Total: 4.31 kcal Total: -29.24 -7.87 -37.11 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000042221194.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.068 kcal (2) G-P(sol) polarization free energy of solvation -29.236 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.304 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.871 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.107 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.175 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds