Wall clock time and date at job start Mon Mar 30 2020 06:37:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53005 * 109.47052 * 2 1 4 4 N 1.46492 * 109.47134 * 239.99734 * 2 1 3 5 5 C 1.36977 * 119.99917 * 281.80889 * 4 2 1 6 6 H 1.08002 * 119.99892 * 138.77916 * 5 4 2 7 7 C 1.38964 * 120.00119 * 318.76854 * 5 4 2 8 8 N 1.31419 * 119.99997 * 171.10079 * 7 5 4 9 9 Si 1.86805 * 119.99953 * 351.10950 * 7 5 4 10 10 H 1.48498 * 109.47063 * 90.97867 * 9 7 5 11 11 H 1.48495 * 109.47037 * 210.97531 * 9 7 5 12 12 H 1.48499 * 109.46981 * 330.98110 * 9 7 5 13 13 C 1.34777 * 120.00046 * 101.80990 * 4 2 1 14 14 O 1.21660 * 119.99918 * 353.83671 * 13 4 2 15 15 C 1.47128 * 119.99885 * 173.84276 * 13 4 2 16 16 C 1.47090 * 127.21492 * 352.57265 * 15 13 4 17 17 C 1.34109 * 105.98130 * 179.89298 * 16 15 13 18 18 O 1.34288 * 109.20022 * 0.37818 * 17 16 15 19 19 C 1.33700 * 110.91735 * 359.74695 * 18 17 16 20 20 Cl 1.73606 * 125.83930 * 180.02562 * 19 18 17 21 21 H 1.09005 * 109.47661 * 55.47889 * 1 2 3 22 22 H 1.09001 * 109.47644 * 175.47913 * 1 2 3 23 23 H 1.09001 * 109.47258 * 295.48089 * 1 2 3 24 24 H 1.08995 * 109.46912 * 119.99359 * 2 1 3 25 25 H 1.08995 * 109.47285 * 82.15018 * 3 2 1 26 26 H 1.08994 * 109.46528 * 202.15386 * 3 2 1 27 27 H 1.09001 * 109.46791 * 322.14839 * 3 2 1 28 28 H 0.97003 * 119.99789 * 179.97438 * 8 7 5 29 29 H 1.07997 * 127.00894 * 0.03588 * 16 15 13 30 30 H 1.08009 * 125.40282 * 180.08933 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 7 2.0183 -0.6906 -1.1961 5 6 2.0177 -2.0595 -1.2447 6 1 1.7196 -2.5676 -2.1500 7 6 2.4008 -2.7946 -0.1294 8 7 2.2355 -4.0983 -0.1131 9 14 3.1505 -1.9296 1.3469 10 1 2.0749 -1.5529 2.2988 11 1 4.1102 -2.8412 2.0200 12 1 3.8624 -0.7071 0.8954 13 6 2.4681 0.0209 -2.2486 14 8 2.3654 1.2331 -2.2519 15 6 3.0833 -0.6685 -3.3936 16 6 3.4237 -2.0959 -3.4945 17 6 3.9572 -2.2630 -4.7135 18 8 3.9797 -1.0815 -5.3515 19 6 3.4638 -0.1152 -4.5849 20 17 3.3038 1.5561 -5.0266 21 1 -0.3634 0.5824 -0.8467 22 1 -0.3634 -1.0244 -0.0810 23 1 -0.3634 0.4421 0.9277 24 1 1.8932 -0.5137 0.8900 25 1 2.0288 1.8319 1.0180 26 1 3.0584 1.4677 -0.3875 27 1 1.3960 2.0555 -0.6306 28 1 2.5033 -4.6114 0.6654 29 1 3.2725 -2.8550 -2.7414 30 1 4.3165 -3.1985 -5.1164 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000232652621.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:37:56 Heat of formation + Delta-G solvation = 12.655521 kcal Electronic energy + Delta-G solvation = -17764.549300 eV Core-core repulsion = 14782.518948 eV Total energy + Delta-G solvation = -2982.030352 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 257.061 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -41.94559 -39.13577 -36.50334 -35.26829 -33.23297 -32.09218 -30.71750 -28.86468 -26.51079 -25.00942 -23.02970 -21.67225 -20.26994 -19.05200 -18.11752 -16.27418 -16.07745 -15.78645 -15.15777 -14.62691 -14.19365 -13.74986 -13.32868 -12.89918 -12.63680 -12.15654 -12.11122 -12.03405 -11.66908 -11.45816 -11.38603 -11.33993 -10.95950 -10.69364 -10.47616 -10.00872 -9.67069 -9.14795 -9.04745 -8.29451 -8.08454 -7.73917 -6.53487 -4.20009 1.62021 1.81363 2.74933 3.02233 3.18389 3.22955 4.00525 4.04265 4.23079 4.28708 4.89413 5.42092 5.56580 5.67043 5.85762 5.94391 6.02800 6.22267 6.28229 6.36320 6.51697 6.57898 6.66211 6.93890 7.07731 7.11534 7.34252 7.42556 7.98247 8.16811 8.87208 9.28304 9.62188 10.54216 Molecular weight = 257.06amu Principal moments of inertia in cm(-1) A = 0.022733 B = 0.009858 C = 0.007610 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1231.412004 B = 2839.533766 C = 3678.690456 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C 0.124 3.876 3 C -0.134 4.134 4 N -0.452 5.452 5 C -0.338 4.338 6 H 0.115 0.885 7 C 0.063 3.937 8 N -0.866 5.866 9 Si 0.889 3.111 10 H -0.274 1.274 11 H -0.292 1.292 12 H -0.262 1.262 13 C 0.543 3.457 14 O -0.577 6.577 15 C -0.162 4.162 16 C -0.151 4.151 17 C -0.062 4.062 18 O -0.183 6.183 19 C 0.059 3.941 20 Cl 0.034 6.966 21 H 0.055 0.945 22 H 0.065 0.935 23 H 0.050 0.950 24 H 0.057 0.943 25 H 0.029 0.971 26 H 0.066 0.934 27 H 0.074 0.926 28 H 0.277 0.723 29 H 0.197 0.803 30 H 0.208 0.792 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.806 3.749 -4.322 6.000 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C 0.022 3.978 3 C -0.192 4.192 4 N -0.173 5.173 5 C -0.465 4.465 6 H 0.132 0.868 7 C -0.144 4.144 8 N -0.502 5.502 9 Si 0.719 3.281 10 H -0.201 1.201 11 H -0.219 1.219 12 H -0.186 1.186 13 C 0.334 3.666 14 O -0.463 6.463 15 C -0.167 4.167 16 C -0.170 4.170 17 C -0.128 4.128 18 O -0.082 6.082 19 C -0.019 4.019 20 Cl 0.063 6.937 21 H 0.074 0.926 22 H 0.084 0.916 23 H 0.069 0.931 24 H 0.075 0.925 25 H 0.048 0.952 26 H 0.085 0.915 27 H 0.093 0.907 28 H 0.087 0.913 29 H 0.213 0.787 30 H 0.224 0.776 Dipole moment (debyes) X Y Z Total from point charges 1.847 4.340 -4.503 6.521 hybrid contribution 0.293 0.089 0.942 0.991 sum 2.140 4.429 -3.561 6.073 Atomic orbital electron populations 1.22077 0.95664 1.02578 1.00743 1.21289 0.94411 0.93510 0.88601 1.22149 1.03394 0.94881 0.98746 1.43622 1.54116 1.06495 1.13083 1.19347 1.45587 0.78732 1.02826 0.86786 1.25390 0.95267 0.95233 0.98492 1.69644 1.44043 1.05597 1.30912 0.86721 0.79442 0.79524 0.82393 1.20103 1.21946 1.18644 1.17149 0.80398 0.85773 0.83290 1.90712 1.61124 1.13245 1.81196 1.21273 1.06832 0.94239 0.94401 1.24083 0.99148 0.96114 0.97632 1.24004 1.07935 0.86529 0.94288 1.83589 1.65259 1.16390 1.42959 1.22465 1.04212 0.84693 0.90551 1.98412 1.95844 1.05916 1.93538 0.92625 0.91598 0.93076 0.92533 0.95237 0.91507 0.90726 0.91288 0.78665 0.77564 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 41. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.97 9.35 37.16 0.35 -2.63 16 2 C 0.12 2.73 2.32 -67.93 -0.16 2.57 16 3 C -0.13 -2.75 7.80 37.16 0.29 -2.47 16 4 N -0.45 -10.73 2.23 -109.04 -0.24 -10.97 16 5 C -0.34 -8.32 6.85 -14.98 -0.10 -8.42 16 6 H 0.11 2.92 5.98 -52.49 -0.31 2.60 16 7 C 0.06 1.59 5.46 -17.46 -0.10 1.49 16 8 N -0.87 -22.45 13.96 55.50 0.77 -21.68 16 9 Si 0.89 20.32 24.61 -169.99 -4.18 16.14 16 10 H -0.27 -6.07 6.86 56.52 0.39 -5.69 16 11 H -0.29 -6.64 7.11 56.52 0.40 -6.24 16 12 H -0.26 -6.10 6.89 56.52 0.39 -5.71 16 13 C 0.54 12.79 7.15 -12.65 -0.09 12.70 16 14 O -0.58 -13.75 11.73 5.22 0.06 -13.69 16 15 C -0.16 -3.50 6.13 -103.24 -0.63 -4.13 16 16 C -0.15 -2.96 9.06 -37.45 -0.34 -3.30 16 17 C -0.06 -1.01 12.02 29.28 0.35 -0.65 16 18 O -0.18 -3.23 10.53 7.33 0.08 -3.15 16 19 C 0.06 1.16 7.99 30.19 0.24 1.40 16 20 Cl 0.03 0.60 27.95 -51.86 -1.45 -0.85 16 21 H 0.05 1.07 8.03 -51.93 -0.42 0.65 16 22 H 0.06 1.34 8.03 -51.93 -0.42 0.93 16 23 H 0.05 0.85 8.14 -51.93 -0.42 0.43 16 24 H 0.06 1.29 2.24 -51.93 -0.12 1.17 16 25 H 0.03 0.52 8.14 -51.93 -0.42 0.10 16 26 H 0.07 1.49 6.54 -51.93 -0.34 1.15 16 27 H 0.07 1.53 6.77 -51.93 -0.35 1.18 16 28 H 0.28 6.79 8.31 -40.82 -0.34 6.45 16 29 H 0.20 4.14 5.42 -52.49 -0.28 3.86 16 30 H 0.21 2.36 8.06 -52.48 -0.42 1.94 16 LS Contribution 261.65 15.07 3.94 3.94 Total: -1.00 -27.01 261.65 -3.88 -30.89 By element: Atomic # 1 Polarization: 5.47 SS G_CDS: -2.67 Total: 2.81 kcal Atomic # 6 Polarization: -3.24 SS G_CDS: -0.19 Total: -3.43 kcal Atomic # 7 Polarization: -33.18 SS G_CDS: 0.53 Total: -32.65 kcal Atomic # 8 Polarization: -16.99 SS G_CDS: 0.14 Total: -16.85 kcal Atomic # 14 Polarization: 20.32 SS G_CDS: -4.18 Total: 16.14 kcal Atomic # 17 Polarization: 0.60 SS G_CDS: -1.45 Total: -0.85 kcal Total LS contribution 3.94 Total: 3.94 kcal Total: -27.01 -3.88 -30.89 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000232652621.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.542 kcal (2) G-P(sol) polarization free energy of solvation -27.010 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.531 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.876 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.886 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.656 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds