Wall clock time and date at job start Mon Mar 30 2020 07:06:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.38267 * 119.97216 * 2 1 4 4 C 1.38214 * 120.06013 * 180.02562 * 3 2 1 5 5 C 1.38324 * 120.01193 * 0.25835 * 4 3 2 6 6 Cl 1.73595 * 120.02376 * 179.69995 * 5 4 3 7 7 C 1.38551 * 119.94940 * 359.44758 * 5 4 3 8 8 F 1.35097 * 120.02876 * 180.27718 * 7 5 4 9 9 C 1.38193 * 119.97583 * 180.02562 * 2 1 3 10 10 C 1.50694 * 120.00544 * 359.95974 * 9 2 1 11 11 C 1.53002 * 109.46868 * 264.97162 * 10 9 2 12 12 N 1.46893 * 109.47703 * 24.97366 * 10 9 2 13 13 C 1.50704 * 109.46935 * 144.97627 * 10 9 2 14 14 H 1.07997 * 120.00341 * 357.45792 * 13 10 9 15 15 C 1.37880 * 119.99705 * 177.45555 * 13 10 9 16 16 N 1.31513 * 120.00266 * 0.02562 * 15 13 10 17 17 Si 1.86803 * 119.99843 * 180.02562 * 15 13 10 18 18 H 1.48497 * 109.46973 * 359.97438 * 17 15 13 19 19 H 1.48501 * 109.47006 * 119.99989 * 17 15 13 20 20 H 1.48504 * 109.47054 * 239.99875 * 17 15 13 21 21 H 1.09006 * 109.47205 * 96.38726 * 1 2 3 22 22 H 1.08998 * 109.47350 * 216.39048 * 1 2 3 23 23 H 1.08997 * 109.47456 * 336.38811 * 1 2 3 24 24 H 1.08000 * 119.96871 * 0.02562 * 3 2 1 25 25 H 1.07999 * 119.99191 * 179.97438 * 4 3 2 26 26 H 1.08999 * 109.46706 * 61.70416 * 11 10 9 27 27 H 1.08996 * 109.47344 * 181.69955 * 11 10 9 28 28 H 1.09000 * 109.47350 * 301.70516 * 11 10 9 29 29 H 1.00904 * 110.99743 * 60.00029 * 12 10 9 30 30 H 1.00899 * 111.00574 * 183.95131 * 12 10 9 31 31 H 0.96997 * 120.00518 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1977 1.1978 0.0000 4 6 3.5799 1.1999 -0.0005 5 6 4.2736 0.0032 -0.0065 6 17 6.0095 0.0055 -0.0150 7 6 3.5819 -1.1973 -0.0003 8 9 4.2579 -2.3670 -0.0004 9 6 2.1975 -1.1971 -0.0005 10 6 1.4436 -2.5019 -0.0002 11 6 1.2988 -3.0068 1.4368 12 7 0.1112 -2.2979 -0.5841 13 6 2.1993 -3.5188 -0.8162 14 1 3.1108 -3.2362 -1.3217 15 6 1.7268 -4.8102 -0.9174 16 7 0.6165 -5.1544 -0.3024 17 14 2.6639 -6.0710 -1.9283 18 1 3.8712 -5.4363 -2.5154 19 1 3.0727 -7.2005 -1.0553 20 1 1.7922 -6.5782 -3.0184 21 1 -0.3634 -0.1143 -1.0213 22 1 -0.3634 -0.8272 0.6097 23 1 -0.3634 0.9416 0.4116 24 1 1.6568 2.1325 0.0004 25 1 4.1183 2.1361 -0.0010 26 1 0.7262 -2.2852 2.0195 27 1 0.7800 -3.9654 1.4346 28 1 2.2870 -3.1294 1.8802 29 1 0.1799 -1.9642 -1.5339 30 1 -0.4378 -3.1431 -0.5367 31 1 0.2843 -6.0629 -0.3732 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000238480314.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:06:11 Heat of formation + Delta-G solvation = -14.341972 kcal Electronic energy + Delta-G solvation = -17731.077844 eV Core-core repulsion = 14760.249583 eV Total energy + Delta-G solvation = -2970.828262 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 257.068 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -48.05186 -39.07282 -36.45353 -35.38028 -32.23599 -31.06224 -29.45996 -27.70397 -26.04528 -25.11912 -22.61690 -21.09958 -19.42567 -17.07831 -16.43229 -15.69849 -15.56965 -14.81038 -14.59033 -14.19620 -13.60643 -13.23903 -12.84486 -12.52824 -12.40770 -12.10699 -12.04955 -11.55390 -11.27062 -10.99510 -10.92203 -10.87346 -10.70126 -10.59646 -10.36069 -10.25128 -9.73303 -9.38341 -8.62913 -7.98995 -7.96631 -7.05900 -6.06906 -4.22615 1.55123 1.72029 2.44384 3.22420 3.31813 3.38585 4.02046 4.34754 4.77490 5.12213 5.22316 5.44568 5.57973 5.75027 6.06752 6.17294 6.32017 6.48437 6.51725 6.55654 6.68885 6.86114 6.95032 7.08107 7.24007 7.34706 7.56343 7.71700 7.91309 8.12263 8.60798 8.83916 8.97518 9.47719 10.87589 Molecular weight = 257.07amu Principal moments of inertia in cm(-1) A = 0.020912 B = 0.009690 C = 0.007163 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1338.625767 B = 2888.923204 C = 3907.994166 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C -0.042 4.042 3 C -0.138 4.138 4 C -0.102 4.102 5 C -0.094 4.094 6 Cl -0.076 7.076 7 C 0.129 3.871 8 F -0.110 7.110 9 C -0.069 4.069 10 C 0.268 3.732 11 C -0.126 4.126 12 N -0.836 5.836 13 C -0.540 4.540 14 H 0.067 0.933 15 C 0.070 3.930 16 N -0.892 5.892 17 Si 0.893 3.107 18 H -0.273 1.273 19 H -0.283 1.283 20 H -0.285 1.285 21 H 0.069 0.931 22 H 0.112 0.888 23 H 0.029 0.971 24 H 0.126 0.874 25 H 0.129 0.871 26 H 0.018 0.982 27 H 0.095 0.905 28 H 0.028 0.972 29 H 0.316 0.684 30 H 0.353 0.647 31 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.756 9.875 0.767 10.059 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.043 4.043 3 C -0.157 4.157 4 C -0.121 4.121 5 C -0.122 4.122 6 Cl -0.047 7.047 7 C 0.108 3.892 8 F -0.088 7.088 9 C -0.071 4.071 10 C 0.176 3.824 11 C -0.184 4.184 12 N -0.366 5.366 13 C -0.579 4.579 14 H 0.085 0.915 15 C -0.132 4.132 16 N -0.532 5.532 17 Si 0.721 3.279 18 H -0.197 1.197 19 H -0.209 1.209 20 H -0.211 1.211 21 H 0.088 0.912 22 H 0.130 0.870 23 H 0.047 0.953 24 H 0.144 0.856 25 H 0.147 0.853 26 H 0.037 0.963 27 H 0.114 0.886 28 H 0.048 0.952 29 H 0.126 0.874 30 H 0.169 0.831 31 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 1.713 10.184 1.388 10.420 hybrid contribution 1.371 -1.656 -1.283 2.504 sum 3.085 8.528 0.105 9.069 Atomic orbital electron populations 1.21106 0.89326 1.01178 1.03687 1.19982 0.97740 0.90935 0.95620 1.20986 0.92946 0.98093 1.03651 1.20673 0.94209 0.95601 1.01617 1.20944 0.84280 0.94437 1.12524 1.98326 1.10151 1.98944 1.97319 1.17289 0.89890 0.80140 1.01891 1.91557 1.79535 1.44792 1.92921 1.20525 0.90787 0.98059 0.97714 1.17243 0.86310 0.85259 0.93562 1.21753 0.99424 1.02640 0.94587 1.60163 1.16400 1.37578 1.22423 1.22110 1.10298 0.95229 1.30299 0.91470 1.24907 0.94946 0.98138 0.95214 1.69690 1.21154 1.19374 1.42999 0.86503 0.80126 0.81317 0.79930 1.19717 1.20935 1.21133 0.91237 0.86974 0.95250 0.85590 0.85314 0.96302 0.88616 0.95249 0.87450 0.83095 0.92715 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.55 8.14 36.01 0.29 -1.25 16 2 C -0.04 -0.75 5.84 -104.63 -0.61 -1.37 16 3 C -0.14 -2.12 9.67 -39.58 -0.38 -2.50 16 4 C -0.10 -1.58 9.83 -39.56 -0.39 -1.97 16 5 C -0.09 -1.71 6.33 -39.43 -0.25 -1.96 16 6 Cl -0.08 -1.26 28.62 -51.86 -1.48 -2.74 16 7 C 0.13 2.73 6.80 -39.39 -0.27 2.46 16 8 F -0.11 -2.58 13.54 2.25 0.03 -2.55 16 9 C -0.07 -1.45 4.77 -104.56 -0.50 -1.95 16 10 C 0.27 6.15 0.48 -133.91 -0.06 6.08 16 11 C -0.13 -2.95 8.45 37.16 0.31 -2.64 16 12 N -0.84 -17.53 4.71 -1.14 -0.01 -17.53 16 13 C -0.54 -13.96 6.85 -34.44 -0.24 -14.19 16 14 H 0.07 1.83 5.68 -52.49 -0.30 1.53 16 15 C 0.07 1.81 5.22 -17.82 -0.09 1.71 16 16 N -0.89 -23.09 9.55 55.43 0.53 -22.56 16 17 Si 0.89 21.00 29.54 -169.99 -5.02 15.98 16 18 H -0.27 -6.54 7.11 56.52 0.40 -6.14 16 19 H -0.28 -6.71 7.11 56.52 0.40 -6.30 16 20 H -0.29 -6.64 7.11 56.52 0.40 -6.24 16 21 H 0.07 1.08 7.07 -51.93 -0.37 0.72 16 22 H 0.11 2.01 5.70 -51.93 -0.30 1.72 16 23 H 0.03 0.40 8.04 -51.93 -0.42 -0.02 16 24 H 0.13 1.54 8.06 -52.49 -0.42 1.12 16 25 H 0.13 1.62 8.06 -52.49 -0.42 1.19 16 26 H 0.02 0.39 7.78 -51.93 -0.40 -0.01 16 27 H 0.10 2.42 5.82 -51.93 -0.30 2.12 16 28 H 0.03 0.69 8.14 -51.93 -0.42 0.27 16 29 H 0.32 6.48 8.06 -39.29 -0.32 6.16 16 30 H 0.35 8.04 7.19 -39.29 -0.28 7.76 16 31 H 0.26 6.60 8.31 -40.82 -0.34 6.26 16 LS Contribution 267.56 15.07 4.03 4.03 Total: -1.00 -25.65 267.56 -7.19 -32.84 By element: Atomic # 1 Polarization: 13.21 SS G_CDS: -3.09 Total: 10.12 kcal Atomic # 6 Polarization: -15.40 SS G_CDS: -2.18 Total: -17.58 kcal Atomic # 7 Polarization: -40.62 SS G_CDS: 0.52 Total: -40.10 kcal Atomic # 9 Polarization: -2.58 SS G_CDS: 0.03 Total: -2.55 kcal Atomic # 14 Polarization: 21.00 SS G_CDS: -5.02 Total: 15.98 kcal Atomic # 17 Polarization: -1.26 SS G_CDS: -1.48 Total: -2.74 kcal Total LS contribution 4.03 Total: 4.03 kcal Total: -25.65 -7.19 -32.84 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000238480314.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.496 kcal (2) G-P(sol) polarization free energy of solvation -25.647 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.151 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.191 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.838 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.342 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds