Wall clock time and date at job start Mon Mar 30 2020 07:08:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.38215 * 120.00354 * 2 1 4 4 C 1.38330 * 120.00810 * 180.02562 * 3 2 1 5 5 Cl 1.73599 * 119.98559 * 179.97438 * 4 3 2 6 6 C 1.38373 * 120.02651 * 0.02562 * 4 3 2 7 7 C 1.50709 * 119.99403 * 179.97438 * 6 4 3 8 8 C 1.52998 * 109.46796 * 279.99269 * 7 6 4 9 9 N 1.46498 * 109.47353 * 179.97438 * 8 7 6 10 10 C 1.36936 * 120.00412 * 179.97438 * 9 8 7 11 11 H 1.07998 * 119.99855 * 0.02562 * 10 9 8 12 12 C 1.38812 * 120.00097 * 179.97438 * 10 9 8 13 13 N 1.31621 * 119.99952 * 0.02562 * 12 10 9 14 14 Si 1.86798 * 120.00032 * 179.97438 * 12 10 9 15 15 H 1.48506 * 109.46914 * 60.00258 * 14 12 10 16 16 H 1.48497 * 109.47011 * 180.02562 * 14 12 10 17 17 H 1.48497 * 109.47425 * 300.00626 * 14 12 10 18 18 C 1.38167 * 120.01543 * 359.97438 * 6 4 3 19 19 C 1.38430 * 120.00619 * 180.02562 * 2 1 3 20 20 F 1.35095 * 120.01233 * 359.95859 * 19 2 1 21 21 H 1.08997 * 109.47009 * 89.99842 * 1 2 3 22 22 H 1.09002 * 109.47478 * 210.00199 * 1 2 3 23 23 H 1.09002 * 109.47427 * 329.99948 * 1 2 3 24 24 H 1.07999 * 119.99442 * 359.74706 * 3 2 1 25 25 H 1.08994 * 109.47108 * 39.99305 * 7 6 4 26 26 H 1.08997 * 109.47179 * 159.99849 * 7 6 4 27 27 H 1.09000 * 109.47632 * 300.00557 * 8 7 6 28 28 H 1.09007 * 109.46997 * 59.99865 * 8 7 6 29 29 H 0.97004 * 119.99832 * 0.02562 * 9 8 7 30 30 H 0.97001 * 120.00085 * 179.97438 * 13 12 10 31 31 H 1.08000 * 120.00919 * 180.02562 * 18 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1969 0.0000 4 6 3.5814 1.1970 -0.0005 5 17 4.4489 2.7007 -0.0012 6 6 4.2739 -0.0009 -0.0016 7 6 5.7810 0.0000 -0.0028 8 6 6.2897 0.2513 -1.4237 9 7 7.7547 0.2529 -1.4248 10 6 8.4383 0.4592 -2.5933 11 1 7.8974 0.6212 -3.5139 12 6 9.8264 0.4612 -2.5942 13 7 10.4855 0.2643 -1.4721 14 14 10.7589 0.7420 -4.1883 15 1 10.3978 2.0703 -4.7455 16 1 12.2191 0.6966 -3.9220 17 1 10.4010 -0.3182 -5.1645 18 6 3.5841 -1.1980 -0.0016 19 6 2.1992 -1.1988 -0.0005 20 9 1.5241 -2.3689 -0.0002 21 1 -0.3633 0.0000 -1.0276 22 1 -0.3634 -0.8900 0.5139 23 1 -0.3634 0.8900 0.5138 24 1 1.6581 2.1322 -0.0041 25 1 6.1443 0.7873 0.6577 26 1 6.1452 -0.9655 0.3480 27 1 5.9263 -0.5358 -2.0843 28 1 5.9254 1.2169 -1.7746 29 1 8.2405 0.1070 -0.5980 30 1 11.4555 0.2654 -1.4728 31 1 4.1247 -2.1330 -0.0020 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000258813942.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:08:04 Heat of formation + Delta-G solvation = -31.497361 kcal Electronic energy + Delta-G solvation = -16200.197101 eV Core-core repulsion = 13228.624926 eV Total energy + Delta-G solvation = -2971.572175 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 257.068 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -49.03236 -39.56715 -36.38675 -35.44949 -33.54923 -31.39597 -30.43175 -29.15927 -26.08304 -23.61286 -23.06239 -21.76479 -20.75272 -17.41114 -17.01679 -16.70174 -16.18518 -15.84507 -14.75940 -14.39421 -14.05875 -13.80369 -13.49448 -13.42150 -13.30829 -12.80086 -12.70595 -12.58073 -12.01552 -11.44102 -11.36468 -11.03923 -10.92965 -10.74238 -10.61891 -10.58350 -10.08760 -9.69308 -8.97287 -8.83922 -8.45360 -6.89857 -5.73826 -3.02570 0.87808 1.00059 2.17718 3.29059 3.46483 3.50499 3.51768 4.05575 4.42807 4.55033 4.62581 4.83066 4.97576 5.23018 5.33239 5.48931 5.51840 5.63343 5.64208 5.75987 5.82948 5.89628 6.01345 6.22437 6.24361 6.31119 6.64219 6.82064 6.87912 7.72358 8.44900 9.56030 10.13009 10.48253 11.49110 Molecular weight = 257.07amu Principal moments of inertia in cm(-1) A = 0.030439 B = 0.004640 C = 0.004295 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 919.639785 B = 6032.481999 C = 6517.228198 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 C -0.121 4.121 3 C -0.084 4.084 4 C -0.042 4.042 5 Cl -0.050 7.050 6 C -0.032 4.032 7 C -0.096 4.096 8 C 0.161 3.839 9 N -0.732 5.732 10 C -0.238 4.238 11 H 0.070 0.930 12 C -0.014 4.014 13 N -0.934 5.934 14 Si 0.907 3.093 15 H -0.286 1.286 16 H -0.291 1.291 17 H -0.286 1.286 18 C -0.136 4.136 19 C 0.101 3.899 20 F -0.136 7.136 21 H 0.074 0.926 22 H 0.070 0.930 23 H 0.072 0.928 24 H 0.140 0.860 25 H 0.084 0.916 26 H 0.079 0.921 27 H 0.018 0.982 28 H 0.027 0.973 29 H 0.384 0.616 30 H 0.255 0.745 31 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.835 0.335 5.523 20.592 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.122 4.122 3 C -0.102 4.102 4 C -0.069 4.069 5 Cl -0.021 7.021 6 C -0.033 4.033 7 C -0.134 4.134 8 C 0.033 3.967 9 N -0.376 5.376 10 C -0.370 4.370 11 H 0.088 0.912 12 C -0.209 4.209 13 N -0.583 5.583 14 Si 0.738 3.262 15 H -0.213 1.213 16 H -0.217 1.217 17 H -0.213 1.213 18 C -0.155 4.155 19 C 0.081 3.919 20 F -0.115 7.115 21 H 0.093 0.907 22 H 0.089 0.911 23 H 0.091 0.909 24 H 0.158 0.842 25 H 0.103 0.897 26 H 0.097 0.903 27 H 0.036 0.964 28 H 0.045 0.955 29 H 0.217 0.783 30 H 0.065 0.935 31 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -19.732 0.458 5.348 20.449 hybrid contribution 0.719 -0.008 -0.617 0.947 sum -19.014 0.450 4.731 19.599 Atomic orbital electron populations 1.20698 0.89728 1.03350 1.02936 1.19768 0.97083 0.91302 1.04084 1.20751 0.91751 0.97984 0.99756 1.20871 0.92196 0.87922 1.05899 1.98401 1.76449 1.30628 1.96633 1.19703 0.97227 0.90363 0.96027 1.20934 0.87954 1.03828 1.00674 1.20582 0.86278 0.98257 0.91571 1.42309 0.99185 1.87102 1.09014 1.19177 0.89051 1.40976 0.87747 0.91248 1.24728 0.96335 1.02859 0.97013 1.69651 1.06842 1.56802 1.25014 0.86263 0.78945 0.78031 0.82936 1.21255 1.21672 1.21270 1.21049 0.91900 0.99302 1.03228 1.17529 0.89915 0.80948 1.03463 1.91480 1.80252 1.45916 1.93854 0.90685 0.91093 0.90878 0.84175 0.89708 0.90273 0.96387 0.95530 0.78253 0.93478 0.83695 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.88 9.83 36.00 0.35 -0.53 16 2 C -0.12 -1.32 5.89 -104.56 -0.62 -1.94 16 3 C -0.08 -0.94 9.48 -39.56 -0.38 -1.31 16 4 C -0.04 -0.57 6.31 -39.50 -0.25 -0.81 16 5 Cl -0.05 -0.72 26.62 -51.86 -1.38 -2.10 16 6 C -0.03 -0.45 5.14 -104.59 -0.54 -0.99 16 7 C -0.10 -1.59 4.91 -27.88 -0.14 -1.73 16 8 C 0.16 3.32 6.19 -4.04 -0.03 3.29 16 9 N -0.73 -18.88 5.60 -59.91 -0.34 -19.22 16 10 C -0.24 -6.80 9.99 -15.06 -0.15 -6.95 16 11 H 0.07 1.92 7.83 -52.49 -0.41 1.51 16 12 C -0.01 -0.39 5.50 -17.43 -0.10 -0.49 16 13 N -0.93 -28.51 13.06 55.49 0.72 -27.79 16 14 Si 0.91 22.67 29.55 -169.99 -5.02 17.64 16 15 H -0.29 -7.03 7.11 56.52 0.40 -6.63 16 16 H -0.29 -7.28 7.11 56.52 0.40 -6.88 16 17 H -0.29 -7.02 7.11 56.52 0.40 -6.62 16 18 C -0.14 -1.78 9.65 -39.52 -0.38 -2.16 16 19 C 0.10 1.24 7.24 -39.42 -0.29 0.96 16 20 F -0.14 -1.68 16.48 2.25 0.04 -1.65 16 21 H 0.07 0.55 8.14 -51.93 -0.42 0.12 16 22 H 0.07 0.55 7.64 -51.93 -0.40 0.16 16 23 H 0.07 0.46 8.09 -51.93 -0.42 0.04 16 24 H 0.14 1.24 8.06 -52.49 -0.42 0.82 16 25 H 0.08 1.43 7.35 -51.93 -0.38 1.04 16 26 H 0.08 1.26 8.00 -51.93 -0.42 0.84 16 27 H 0.02 0.38 8.14 -51.93 -0.42 -0.04 16 28 H 0.03 0.56 7.26 -51.93 -0.38 0.19 16 29 H 0.38 10.30 7.67 -40.82 -0.31 9.99 16 30 H 0.26 7.54 8.31 -40.82 -0.34 7.20 16 31 H 0.15 1.73 8.04 -52.49 -0.42 1.31 16 LS Contribution 287.29 15.07 4.33 4.33 Total: -1.00 -30.69 287.29 -7.69 -38.38 By element: Atomic # 1 Polarization: 6.60 SS G_CDS: -3.54 Total: 3.06 kcal Atomic # 6 Polarization: -10.17 SS G_CDS: -2.50 Total: -12.67 kcal Atomic # 7 Polarization: -47.39 SS G_CDS: 0.39 Total: -47.00 kcal Atomic # 9 Polarization: -1.68 SS G_CDS: 0.04 Total: -1.65 kcal Atomic # 14 Polarization: 22.67 SS G_CDS: -5.02 Total: 17.64 kcal Atomic # 17 Polarization: -0.72 SS G_CDS: -1.38 Total: -2.10 kcal Total LS contribution 4.33 Total: 4.33 kcal Total: -30.69 -7.69 -38.38 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000258813942.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.882 kcal (2) G-P(sol) polarization free energy of solvation -30.693 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.811 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.686 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.379 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.497 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds