Wall clock time and date at job start Mon Mar 30 2020 07:08:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.38205 * 120.00808 * 2 1 4 4 C 1.38326 * 120.01646 * 179.97438 * 3 2 1 5 5 Cl 1.73595 * 119.99280 * 179.97438 * 4 3 2 6 6 C 1.38382 * 120.02127 * 359.97438 * 4 3 2 7 7 C 1.50698 * 119.99229 * 179.97438 * 6 4 3 8 8 H 1.09008 * 109.46977 * 40.00565 * 7 6 4 9 9 N 1.46904 * 109.46837 * 159.99823 * 7 6 4 10 10 C 1.52997 * 109.47721 * 280.00416 * 7 6 4 11 11 C 1.50701 * 109.47212 * 174.99887 * 10 7 6 12 12 H 1.07998 * 120.00129 * 0.02562 * 11 10 7 13 13 C 1.37880 * 119.99861 * 179.97438 * 11 10 7 14 14 N 1.31510 * 119.99913 * 0.02562 * 13 11 10 15 15 Si 1.86797 * 119.99734 * 180.02562 * 13 11 10 16 16 H 1.48499 * 109.47094 * 90.00289 * 15 13 11 17 17 H 1.48505 * 109.47195 * 210.00171 * 15 13 11 18 18 H 1.48493 * 109.47449 * 330.00136 * 15 13 11 19 19 C 1.38168 * 120.01167 * 0.27762 * 6 4 3 20 20 C 1.38434 * 120.00432 * 179.97438 * 2 1 3 21 21 F 1.35102 * 120.01646 * 0.02869 * 20 2 1 22 22 H 1.09000 * 109.47269 * 90.00387 * 1 2 3 23 23 H 1.08999 * 109.47513 * 210.00028 * 1 2 3 24 24 H 1.08999 * 109.47277 * 330.00407 * 1 2 3 25 25 H 1.08001 * 119.99134 * 0.02562 * 3 2 1 26 26 H 1.00898 * 111.00551 * 296.05373 * 9 7 6 27 27 H 1.00898 * 110.99372 * 60.01160 * 9 7 6 28 28 H 1.09002 * 109.47153 * 54.99889 * 10 7 6 29 29 H 1.09001 * 109.46832 * 295.00079 * 10 7 6 30 30 H 0.97002 * 119.99768 * 179.97438 * 14 13 11 31 31 H 1.08003 * 120.00343 * 179.74141 * 19 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1968 0.0000 4 6 3.5814 1.1970 0.0005 5 17 4.4490 2.7006 -0.0001 6 6 4.2740 -0.0011 0.0016 7 6 5.7810 -0.0001 0.0016 8 1 6.1438 0.7880 0.6616 9 7 6.2714 -1.3009 0.4765 10 6 6.2909 0.2495 -1.4191 11 6 7.7928 0.3728 -1.3993 12 1 8.3298 0.2818 -0.4668 13 6 8.4812 0.6008 -2.5720 14 7 7.8273 0.7112 -3.7076 15 14 10.3428 0.7529 -2.5476 16 1 10.9516 -0.5876 -2.7418 17 1 10.7800 1.6581 -3.6406 18 1 10.7770 1.3090 -1.2410 19 6 3.5840 -1.1981 -0.0037 20 6 2.1993 -1.1988 0.0005 21 9 1.5242 -2.3691 0.0005 22 1 -0.3634 -0.0001 -1.0277 23 1 -0.3634 -0.8900 0.5138 24 1 -0.3634 0.8900 0.5138 25 1 1.6582 2.1321 0.0004 26 1 6.0020 -1.4607 1.4356 27 1 5.9485 -2.0484 -0.1192 28 1 5.8557 1.1716 -1.8046 29 1 6.0031 -0.5838 -2.0601 30 1 8.3116 0.8719 -4.5325 31 1 4.1247 -2.1331 -0.0070 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259458027.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:08:27 Heat of formation + Delta-G solvation = -40.730567 kcal Electronic energy + Delta-G solvation = -16715.400425 eV Core-core repulsion = 13743.427868 eV Total energy + Delta-G solvation = -2971.972557 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 257.068 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -48.90322 -39.50987 -36.15750 -35.79192 -32.70166 -31.59953 -30.33024 -28.41242 -27.00689 -24.03466 -22.70394 -21.69811 -19.93015 -17.23070 -16.72086 -16.23634 -16.00312 -15.69954 -15.15995 -14.35653 -14.06502 -13.81694 -13.62474 -13.44111 -12.95756 -12.81368 -12.38213 -12.12465 -11.91024 -11.31002 -11.27880 -10.91084 -10.87836 -10.51953 -10.40047 -10.26134 -9.64201 -9.07772 -8.75443 -8.28205 -8.19985 -8.09275 -5.90059 -3.88580 1.06666 1.18465 2.40083 3.39847 3.45446 3.47385 3.50788 4.21377 4.54378 4.63180 4.69360 5.01422 5.16567 5.25124 5.40308 5.45058 5.48942 5.64847 5.79728 5.88530 6.06179 6.14287 6.16542 6.36801 6.72680 6.84110 7.52455 7.67238 7.92424 8.06095 8.11009 8.51880 9.16770 9.73001 11.21804 Molecular weight = 257.07amu Principal moments of inertia in cm(-1) A = 0.027760 B = 0.006014 C = 0.005448 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1008.391712 B = 4654.487371 C = 5138.202217 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.108 4.108 2 C -0.127 4.127 3 C -0.083 4.083 4 C -0.038 4.038 5 Cl -0.049 7.049 6 C -0.065 4.065 7 C 0.129 3.871 8 H 0.092 0.908 9 N -0.821 5.821 10 C 0.038 3.962 11 C -0.492 4.492 12 H 0.062 0.938 13 C 0.052 3.948 14 N -0.902 5.902 15 Si 0.892 3.108 16 H -0.282 1.282 17 H -0.290 1.290 18 H -0.275 1.275 19 C -0.149 4.149 20 C 0.102 3.898 21 F -0.139 7.139 22 H 0.073 0.927 23 H 0.069 0.931 24 H 0.071 0.929 25 H 0.139 0.861 26 H 0.324 0.676 27 H 0.335 0.665 28 H 0.030 0.970 29 H 0.014 0.986 30 H 0.258 0.742 31 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.745 -0.607 8.593 16.222 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.165 4.165 2 C -0.128 4.128 3 C -0.102 4.102 4 C -0.066 4.066 5 Cl -0.020 7.020 6 C -0.068 4.068 7 C 0.017 3.983 8 H 0.110 0.890 9 N -0.348 5.348 10 C 0.001 3.999 11 C -0.530 4.530 12 H 0.081 0.919 13 C -0.148 4.148 14 N -0.542 5.542 15 Si 0.721 3.279 16 H -0.209 1.209 17 H -0.216 1.216 18 H -0.199 1.199 19 C -0.168 4.168 20 C 0.082 3.918 21 F -0.117 7.117 22 H 0.092 0.908 23 H 0.087 0.913 24 H 0.090 0.910 25 H 0.156 0.844 26 H 0.135 0.865 27 H 0.149 0.851 28 H 0.048 0.952 29 H 0.033 0.967 30 H 0.067 0.933 31 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -12.904 -0.199 8.269 15.327 hybrid contribution -0.083 -0.289 -0.099 0.316 sum -12.987 -0.488 8.169 15.350 Atomic orbital electron populations 1.20671 0.89869 1.03137 1.02831 1.19710 0.96935 0.91318 1.04826 1.20761 0.91899 0.97856 0.99716 1.20796 0.91988 0.88111 1.05675 1.98391 1.76523 1.30495 1.96586 1.21251 1.00711 0.90398 0.94485 1.21003 0.82822 0.92132 1.02327 0.89040 1.58788 1.67003 1.03696 1.05340 1.19153 0.96614 0.97380 0.86770 1.21099 0.91259 1.46988 0.93680 0.91935 1.24998 0.98169 0.95965 0.95687 1.69970 1.35282 1.50693 0.98277 0.86588 0.86148 0.77744 0.77438 1.20876 1.21587 1.19948 1.20907 0.91938 0.99327 1.04652 1.17497 0.89866 0.80870 1.03520 1.91466 1.80315 1.46022 1.93918 0.90796 0.91252 0.91002 0.84354 0.86465 0.85053 0.95198 0.96727 0.93251 0.84263 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.06 9.83 36.01 0.35 -0.70 16 2 C -0.13 -1.65 5.88 -104.56 -0.62 -2.27 16 3 C -0.08 -1.13 9.48 -39.56 -0.38 -1.51 16 4 C -0.04 -0.62 6.31 -39.50 -0.25 -0.87 16 5 Cl -0.05 -0.82 26.65 -51.86 -1.38 -2.20 16 6 C -0.07 -1.12 5.08 -104.60 -0.53 -1.65 16 7 C 0.13 2.55 2.38 -68.86 -0.16 2.39 16 8 H 0.09 1.87 7.35 -51.92 -0.38 1.49 16 9 N -0.82 -14.67 8.43 -5.65 -0.05 -14.72 16 10 C 0.04 0.95 4.54 -27.88 -0.13 0.83 16 11 C -0.49 -13.72 8.84 -34.44 -0.30 -14.02 16 12 H 0.06 1.74 7.74 -52.49 -0.41 1.34 16 13 C 0.05 1.48 5.46 -17.82 -0.10 1.38 16 14 N -0.90 -27.17 13.29 55.43 0.74 -26.44 16 15 Si 0.89 22.08 29.54 -169.99 -5.02 17.06 16 16 H -0.28 -6.94 7.11 56.52 0.40 -6.54 16 17 H -0.29 -7.13 7.11 56.52 0.40 -6.72 16 18 H -0.27 -6.67 7.11 56.52 0.40 -6.27 16 19 C -0.15 -2.30 9.23 -39.52 -0.36 -2.67 16 20 C 0.10 1.47 7.24 -39.42 -0.29 1.19 16 21 F -0.14 -1.95 16.48 2.25 0.04 -1.91 16 22 H 0.07 0.67 8.14 -51.93 -0.42 0.25 16 23 H 0.07 0.65 7.64 -51.93 -0.40 0.25 16 24 H 0.07 0.57 8.09 -51.93 -0.42 0.15 16 25 H 0.14 1.53 8.06 -52.49 -0.42 1.10 16 26 H 0.32 4.80 9.06 -39.29 -0.36 4.45 16 27 H 0.34 5.70 7.28 -39.29 -0.29 5.42 16 28 H 0.03 0.80 7.30 -51.93 -0.38 0.42 16 29 H 0.01 0.39 8.14 -51.93 -0.42 -0.03 16 30 H 0.26 7.40 8.31 -40.82 -0.34 7.06 16 31 H 0.14 1.97 6.25 -52.48 -0.33 1.64 16 LS Contribution 283.33 15.07 4.27 4.27 Total: -1.00 -30.31 283.33 -7.52 -37.84 By element: Atomic # 1 Polarization: 7.37 SS G_CDS: -3.36 Total: 4.01 kcal Atomic # 6 Polarization: -15.14 SS G_CDS: -2.76 Total: -17.90 kcal Atomic # 7 Polarization: -41.85 SS G_CDS: 0.69 Total: -41.16 kcal Atomic # 9 Polarization: -1.95 SS G_CDS: 0.04 Total: -1.91 kcal Atomic # 14 Polarization: 22.08 SS G_CDS: -5.02 Total: 17.06 kcal Atomic # 17 Polarization: -0.82 SS G_CDS: -1.38 Total: -2.20 kcal Total LS contribution 4.27 Total: 4.27 kcal Total: -30.31 -7.52 -37.84 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259458027.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.896 kcal (2) G-P(sol) polarization free energy of solvation -30.313 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.208 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.522 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.835 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.731 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds