Wall clock time and date at job start Mon Mar 30 2020 07:07:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.38260 * 119.97241 * 2 1 4 4 C 1.38276 * 120.01302 * 180.02562 * 3 2 1 5 5 Cl 1.73608 * 120.02206 * 180.02562 * 4 3 2 6 6 C 1.38584 * 119.95369 * 359.70941 * 4 3 2 7 7 F 1.35099 * 120.03776 * 180.29819 * 6 4 3 8 8 C 1.38407 * 119.93355 * 0.54534 * 6 4 3 9 9 C 1.50703 * 120.00312 * 179.75021 * 8 6 4 10 10 H 1.08996 * 109.47343 * 324.72261 * 9 8 6 11 11 N 1.46905 * 109.47075 * 204.72419 * 9 8 6 12 12 C 1.53001 * 109.47072 * 84.72596 * 9 8 6 13 13 C 1.50703 * 109.47072 * 185.00098 * 12 9 8 14 14 H 1.07998 * 120.00155 * 359.97438 * 13 12 9 15 15 C 1.37871 * 119.99920 * 180.02562 * 13 12 9 16 16 N 1.31514 * 120.00383 * 359.97438 * 15 13 12 17 17 Si 1.86807 * 120.00062 * 179.97438 * 15 13 12 18 18 H 1.48503 * 109.46978 * 359.97438 * 17 15 13 19 19 H 1.48501 * 109.46836 * 120.00019 * 17 15 13 20 20 H 1.48500 * 109.47131 * 239.99797 * 17 15 13 21 21 C 1.38215 * 119.96797 * 180.02562 * 2 1 3 22 22 H 1.08997 * 109.47052 * 269.98068 * 1 2 3 23 23 H 1.09007 * 109.47250 * 29.97471 * 1 2 3 24 24 H 1.08997 * 109.47550 * 149.96825 * 1 2 3 25 25 H 1.08003 * 119.99329 * 0.02562 * 3 2 1 26 26 H 1.00901 * 110.99869 * 176.04968 * 11 9 8 27 27 H 1.00896 * 110.99543 * 300.00090 * 11 9 8 28 28 H 1.08999 * 109.47045 * 304.99692 * 12 9 8 29 29 H 1.09002 * 109.47037 * 64.99916 * 12 9 8 30 30 H 0.96999 * 120.00227 * 180.02562 * 16 15 13 31 31 H 1.07999 * 119.97813 * 359.97438 * 21 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1977 1.1977 0.0000 4 6 3.5805 1.1987 -0.0005 5 17 4.4480 2.7025 0.0001 6 6 4.2733 -0.0015 0.0050 7 9 5.6242 -0.0025 0.0106 8 6 3.5798 -1.1993 -0.0003 9 6 4.3316 -2.5054 0.0000 10 1 5.2423 -2.4006 -0.5895 11 7 3.4879 -3.5562 -0.5849 12 6 4.6951 -2.8843 1.4371 13 6 5.5514 -4.1243 1.4284 14 1 5.8102 -4.5953 0.4917 15 6 6.0037 -4.6581 2.6165 16 7 5.6882 -4.0848 3.7573 17 14 7.0646 -6.1956 2.6058 18 1 7.2740 -6.6428 1.2052 19 1 8.3774 -5.8954 3.2317 20 1 6.3853 -7.2711 3.3720 21 6 2.1974 -1.1974 -0.0005 22 1 -0.3633 -0.0003 1.0276 23 1 -0.3634 0.8903 -0.5135 24 1 -0.3634 -0.8897 -0.5143 25 1 1.6571 2.1327 0.0004 26 1 3.9921 -4.4274 -0.6552 27 1 2.6367 -3.6727 -0.0559 28 1 5.2458 -2.0657 1.9004 29 1 3.7839 -3.0759 2.0039 30 1 6.0067 -4.4602 4.5931 31 1 1.6565 -2.1322 -0.0005 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259985788.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:07:35 Heat of formation + Delta-G solvation = -46.230233 kcal Electronic energy + Delta-G solvation = -16752.324503 eV Core-core repulsion = 13780.113463 eV Total energy + Delta-G solvation = -2972.211041 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 257.068 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -48.51380 -39.32757 -36.60596 -35.61642 -32.65436 -32.03228 -30.05894 -28.17470 -26.58215 -24.86240 -22.52968 -21.54840 -19.66566 -17.55268 -16.84595 -16.40485 -15.37567 -15.35348 -14.76484 -14.61379 -14.06407 -13.65256 -13.39129 -13.24731 -12.73132 -12.54700 -12.45012 -12.23417 -12.04082 -11.60990 -11.22813 -11.09568 -10.96499 -10.80790 -10.55897 -10.36251 -9.98385 -9.23135 -8.62585 -8.48901 -8.29999 -7.81708 -6.11518 -4.16519 1.19684 1.32014 2.13582 3.24594 3.32836 3.35984 3.63210 4.35390 4.38491 4.78162 4.91068 5.15593 5.20853 5.25200 5.34609 5.58828 5.63047 5.80441 5.81433 6.04223 6.14477 6.28409 6.50726 6.57222 6.63725 6.95480 7.38905 7.48852 7.80526 7.91458 8.10989 8.24871 8.89518 9.48966 10.99259 Molecular weight = 257.07amu Principal moments of inertia in cm(-1) A = 0.024739 B = 0.005924 C = 0.005214 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1131.547793 B = 4725.194440 C = 5368.603513 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.109 4.109 2 C -0.089 4.089 3 C -0.102 4.102 4 C -0.069 4.069 5 Cl -0.063 7.063 6 C 0.105 3.895 7 F -0.123 7.123 8 C -0.069 4.069 9 C 0.126 3.874 10 H 0.084 0.916 11 N -0.838 5.838 12 C 0.002 3.998 13 C -0.526 4.526 14 H 0.058 0.942 15 C 0.060 3.940 16 N -0.890 5.890 17 Si 0.894 3.106 18 H -0.271 1.271 19 H -0.283 1.283 20 H -0.284 1.284 21 C -0.077 4.077 22 H 0.072 0.928 23 H 0.066 0.934 24 H 0.070 0.930 25 H 0.135 0.865 26 H 0.351 0.649 27 H 0.329 0.671 28 H 0.022 0.978 29 H 0.019 0.981 30 H 0.262 0.738 31 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.159 9.155 -7.322 14.876 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C -0.090 4.090 3 C -0.121 4.121 4 C -0.096 4.096 5 Cl -0.034 7.034 6 C 0.085 3.915 7 F -0.101 7.101 8 C -0.070 4.070 9 C 0.014 3.986 10 H 0.102 0.898 11 N -0.367 5.367 12 C -0.036 4.036 13 C -0.564 4.564 14 H 0.077 0.923 15 C -0.142 4.142 16 N -0.528 5.528 17 Si 0.722 3.278 18 H -0.196 1.196 19 H -0.209 1.209 20 H -0.210 1.210 21 C -0.096 4.096 22 H 0.091 0.909 23 H 0.085 0.915 24 H 0.089 0.911 25 H 0.153 0.847 26 H 0.165 0.835 27 H 0.141 0.859 28 H 0.040 0.960 29 H 0.037 0.963 30 H 0.071 0.929 31 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -9.014 9.734 -7.790 15.384 hybrid contribution 1.196 -1.083 1.193 2.007 sum -7.818 8.650 -6.596 13.396 Atomic orbital electron populations 1.20748 0.90360 1.02912 1.02566 1.19841 0.96480 0.92224 1.00421 1.20651 0.90706 0.98804 1.01954 1.20865 0.93067 0.85968 1.09742 1.98355 1.76847 1.31130 1.97098 1.17219 0.77610 0.92309 1.04409 1.91534 1.27880 1.97147 1.93557 1.20248 0.94444 0.94429 0.97908 1.20482 0.93672 0.86017 0.98385 0.89765 1.59276 1.09144 1.11809 1.56519 1.19784 0.97178 0.97208 0.89434 1.21140 1.32081 1.10503 0.92672 0.92343 1.25015 0.96180 0.97403 0.95570 1.69978 1.45246 1.40074 0.97525 0.86506 0.80273 0.82860 0.78201 1.19601 1.20922 1.20990 1.20840 0.92659 0.98067 0.98017 0.90925 0.91538 0.91100 0.84668 0.83501 0.85891 0.96013 0.96299 0.92879 0.84409 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.02 10.01 36.00 0.36 -0.66 16 2 C -0.09 -1.17 5.88 -104.62 -0.62 -1.78 16 3 C -0.10 -1.37 9.48 -39.56 -0.38 -1.74 16 4 C -0.07 -1.09 6.33 -39.44 -0.25 -1.34 16 5 Cl -0.06 -0.92 28.62 -51.86 -1.48 -2.40 16 6 C 0.11 1.94 7.22 -39.39 -0.28 1.66 16 7 F -0.12 -2.47 16.15 2.25 0.04 -2.44 16 8 C -0.07 -1.26 5.06 -104.56 -0.53 -1.79 16 9 C 0.13 2.57 2.76 -68.86 -0.19 2.38 16 10 H 0.08 1.83 7.80 -51.93 -0.41 1.43 16 11 N -0.84 -14.94 8.79 -5.65 -0.05 -14.99 16 12 C 0.00 0.06 4.60 -27.88 -0.13 -0.07 16 13 C -0.53 -14.17 8.55 -34.44 -0.29 -14.46 16 14 H 0.06 1.52 7.14 -52.49 -0.38 1.14 16 15 C 0.06 1.69 5.46 -17.82 -0.10 1.59 16 16 N -0.89 -26.25 13.29 55.43 0.74 -25.51 16 17 Si 0.89 21.15 29.54 -169.99 -5.02 16.13 16 18 H -0.27 -6.26 7.11 56.52 0.40 -5.85 16 19 H -0.28 -6.73 7.11 56.52 0.40 -6.32 16 20 H -0.28 -6.64 7.11 56.52 0.40 -6.24 16 21 C -0.08 -1.19 8.92 -39.59 -0.35 -1.54 16 22 H 0.07 0.63 8.14 -51.93 -0.42 0.21 16 23 H 0.07 0.52 8.09 -51.92 -0.42 0.10 16 24 H 0.07 0.60 8.08 -51.93 -0.42 0.18 16 25 H 0.14 1.44 8.06 -52.48 -0.42 1.01 16 26 H 0.35 6.41 7.90 -39.29 -0.31 6.10 16 27 H 0.33 5.42 7.21 -39.29 -0.28 5.13 16 28 H 0.02 0.60 8.14 -51.93 -0.42 0.18 16 29 H 0.02 0.49 8.14 -51.93 -0.42 0.07 16 30 H 0.26 7.29 8.31 -40.82 -0.34 6.95 16 31 H 0.14 1.92 6.29 -52.49 -0.33 1.59 16 LS Contribution 285.28 15.07 4.30 4.30 Total: -1.00 -29.40 285.28 -7.61 -37.00 By element: Atomic # 1 Polarization: 9.04 SS G_CDS: -3.37 Total: 5.67 kcal Atomic # 6 Polarization: -15.01 SS G_CDS: -2.76 Total: -17.76 kcal Atomic # 7 Polarization: -41.19 SS G_CDS: 0.69 Total: -40.50 kcal Atomic # 9 Polarization: -2.47 SS G_CDS: 0.04 Total: -2.44 kcal Atomic # 14 Polarization: 21.15 SS G_CDS: -5.02 Total: 16.13 kcal Atomic # 17 Polarization: -0.92 SS G_CDS: -1.48 Total: -2.40 kcal Total LS contribution 4.30 Total: 4.30 kcal Total: -29.40 -7.61 -37.00 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259985788.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.226 kcal (2) G-P(sol) polarization free energy of solvation -29.395 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.622 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.608 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.004 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.230 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds