Wall clock time and date at job start Mon Mar 30 2020 07:06:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.38234 * 119.97454 * 2 1 4 4 C 1.38412 * 119.98623 * 179.97438 * 3 2 1 5 5 F 1.35094 * 120.03211 * 179.97438 * 4 3 2 6 6 C 1.38586 * 119.93571 * 359.72419 * 4 3 2 7 7 Cl 1.73604 * 120.02552 * 180.29752 * 6 4 3 8 8 C 1.38278 * 119.95258 * 0.50344 * 6 4 3 9 9 C 1.50701 * 119.99783 * 179.79054 * 8 6 4 10 10 H 1.09011 * 109.46706 * 11.30395 * 9 8 6 11 11 N 1.46899 * 109.47223 * 131.29527 * 9 8 6 12 12 C 1.50696 * 109.47485 * 251.30255 * 9 8 6 13 13 H 1.08002 * 119.99799 * 359.97438 * 12 9 8 14 14 C 1.37880 * 119.99956 * 179.97438 * 12 9 8 15 15 N 1.31508 * 120.00125 * 359.97438 * 14 12 9 16 16 Si 1.86802 * 119.99802 * 179.72407 * 14 12 9 17 17 H 1.48500 * 109.47056 * 180.27445 * 16 14 12 18 18 H 1.48502 * 109.47206 * 300.27401 * 16 14 12 19 19 H 1.48506 * 109.47290 * 60.27526 * 16 14 12 20 20 C 1.38218 * 119.97294 * 179.97438 * 2 1 3 21 21 C 1.50702 * 119.97176 * 0.02562 * 20 2 1 22 22 H 1.08997 * 109.47388 * 270.02674 * 1 2 3 23 23 H 1.09007 * 109.46989 * 30.02979 * 1 2 3 24 24 H 1.08998 * 109.47364 * 150.02249 * 1 2 3 25 25 H 1.07995 * 120.01213 * 0.02562 * 3 2 1 26 26 H 1.00894 * 111.00164 * 310.36101 * 11 9 8 27 27 H 1.00904 * 110.99683 * 74.31471 * 11 9 8 28 28 H 0.96998 * 120.00269 * 359.72539 * 15 14 12 29 29 H 1.08998 * 109.47030 * 264.57436 * 21 20 2 30 30 H 1.08998 * 109.47122 * 24.57817 * 21 20 2 31 31 H 1.08997 * 109.47006 * 144.57353 * 21 20 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1976 1.1975 0.0000 4 6 3.5817 1.1977 0.0005 5 9 4.2576 2.3674 0.0000 6 6 4.2736 -0.0031 0.0069 7 17 6.0096 -0.0054 0.0153 8 6 3.5801 -1.1994 0.0021 9 6 4.3314 -2.5058 0.0042 10 1 5.3852 -2.3185 0.2110 11 7 3.7782 -3.3872 1.0410 12 6 4.1936 -3.1668 -1.3431 13 1 3.6190 -2.6889 -2.1227 14 6 4.8010 -4.3816 -1.5803 15 7 5.5011 -4.9633 -0.6310 16 14 4.6238 -5.2046 -3.2478 17 1 5.3602 -6.4942 -3.2442 18 1 3.1868 -5.4560 -3.5255 19 1 5.1834 -4.3180 -4.2995 20 6 2.1975 -1.1973 0.0005 21 6 1.4427 -2.5017 0.0005 22 1 -0.3634 0.0005 1.0276 23 1 -0.3633 0.8898 -0.5143 24 1 -0.3634 -0.8902 -0.5135 25 1 1.6574 2.1326 0.0004 26 1 3.7034 -2.9044 1.9238 27 1 2.8857 -3.7630 0.7576 28 1 5.5935 -4.5358 0.2347 29 1 1.3445 -2.8646 1.0236 30 1 0.4521 -2.3482 -0.4273 31 1 1.9858 -3.2357 -0.5948 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259989447.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:06:37 Heat of formation + Delta-G solvation = -32.854401 kcal Electronic energy + Delta-G solvation = -17361.186157 eV Core-core repulsion = 14389.555136 eV Total energy + Delta-G solvation = -2971.631021 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 257.068 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -48.64922 -39.59137 -36.13754 -35.34257 -32.65472 -31.93227 -29.83854 -27.78349 -26.20237 -25.35806 -22.67735 -20.80197 -20.31951 -17.32335 -16.83569 -16.27080 -15.48187 -15.43059 -14.55722 -14.02740 -13.89262 -13.60022 -13.49287 -13.34410 -12.83474 -12.60981 -12.23476 -11.93662 -11.66486 -11.41143 -11.10541 -11.04241 -10.77885 -10.60628 -10.58480 -10.12808 -10.00673 -8.86539 -8.39407 -8.13888 -8.05479 -7.48052 -6.24780 -4.08613 1.32568 1.50027 2.56185 3.43525 3.46309 3.64296 3.75775 4.39614 4.55412 4.86821 5.04188 5.30116 5.31775 5.40009 5.56596 5.62823 5.72803 5.97914 6.02503 6.07501 6.09815 6.23098 6.32134 6.48048 6.68709 6.83455 7.15002 7.32241 7.87204 8.21409 8.57614 8.71471 8.98513 9.73199 11.15345 Molecular weight = 257.07amu Principal moments of inertia in cm(-1) A = 0.020182 B = 0.008895 C = 0.007194 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1387.063495 B = 3147.179149 C = 3891.378793 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.113 4.113 2 C -0.064 4.064 3 C -0.165 4.165 4 C 0.097 3.903 5 F -0.137 7.137 6 C -0.077 4.077 7 Cl -0.052 7.052 8 C -0.033 4.033 9 C 0.232 3.768 10 H 0.057 0.943 11 N -0.838 5.838 12 C -0.611 4.611 13 H 0.049 0.951 14 C 0.040 3.960 15 N -0.886 5.886 16 Si 1.061 2.939 17 H -0.283 1.283 18 H -0.289 1.289 19 H -0.289 1.289 20 C -0.078 4.078 21 C -0.133 4.133 22 H 0.071 0.929 23 H 0.064 0.936 24 H 0.076 0.924 25 H 0.133 0.867 26 H 0.302 0.698 27 H 0.337 0.663 28 H 0.293 0.707 29 H 0.065 0.935 30 H 0.061 0.939 31 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.490 9.000 2.218 12.570 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C -0.065 4.065 3 C -0.184 4.184 4 C 0.077 3.923 5 F -0.116 7.116 6 C -0.105 4.105 7 Cl -0.023 7.023 8 C -0.036 4.036 9 C 0.123 3.877 10 H 0.075 0.925 11 N -0.369 5.369 12 C -0.650 4.650 13 H 0.067 0.933 14 C -0.171 4.171 15 N -0.519 5.519 16 Si 0.890 3.110 17 H -0.208 1.208 18 H -0.215 1.215 19 H -0.216 1.216 20 C -0.079 4.079 21 C -0.189 4.189 22 H 0.089 0.911 23 H 0.083 0.917 24 H 0.094 0.906 25 H 0.151 0.849 26 H 0.112 0.888 27 H 0.155 0.845 28 H 0.106 0.894 29 H 0.083 0.917 30 H 0.080 0.920 31 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges -7.212 7.207 1.255 10.273 hybrid contribution -0.886 2.606 0.848 2.880 sum -8.097 9.813 2.103 12.895 Atomic orbital electron populations 1.20841 0.90760 1.03032 1.02348 1.19627 0.96174 0.91805 0.98852 1.20687 0.91123 0.99083 1.07497 1.17383 0.89922 0.80026 1.04965 1.91470 1.80352 1.45708 1.94071 1.20886 0.85800 0.93431 1.10429 1.98344 1.08463 1.98586 1.96937 1.21268 0.93665 0.96990 0.91662 1.18563 0.93927 0.82386 0.92785 0.92504 1.59600 1.33700 1.39329 1.04279 1.21594 1.39069 1.08400 0.95915 0.93319 1.25611 0.93001 0.94518 1.03992 1.70542 1.34808 1.40539 1.06053 0.83673 0.76189 0.76343 0.74791 1.20823 1.21525 1.21602 1.19591 0.92509 0.95179 1.00636 1.21304 0.99671 0.95499 1.02463 0.91073 0.91701 0.90573 0.84870 0.88761 0.84487 0.89413 0.91686 0.92014 0.87005 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.28 9.59 36.00 0.35 -0.94 16 2 C -0.06 -0.99 5.88 -104.63 -0.62 -1.60 16 3 C -0.16 -2.56 9.68 -39.52 -0.38 -2.94 16 4 C 0.10 1.75 7.28 -39.39 -0.29 1.46 16 5 F -0.14 -2.42 16.84 2.25 0.04 -2.38 16 6 C -0.08 -1.55 6.32 -39.44 -0.25 -1.80 16 7 Cl -0.05 -1.05 26.71 -51.86 -1.38 -2.44 16 8 C -0.03 -0.67 4.75 -104.60 -0.50 -1.17 16 9 C 0.23 5.48 2.23 -70.02 -0.16 5.32 16 10 H 0.06 1.48 6.14 -51.92 -0.32 1.16 16 11 N -0.84 -18.24 7.49 -6.65 -0.05 -18.29 16 12 C -0.61 -16.01 6.69 -34.44 -0.23 -16.24 16 13 H 0.05 1.30 7.74 -52.49 -0.41 0.90 16 14 C 0.04 1.08 5.39 -17.82 -0.10 0.98 16 15 N -0.89 -25.75 13.50 55.43 0.75 -25.00 16 16 Si 1.06 24.37 29.90 -169.99 -5.08 19.29 16 17 H -0.28 -6.58 7.11 56.52 0.40 -6.18 16 18 H -0.29 -6.28 7.11 56.52 0.40 -5.88 16 19 H -0.29 -6.51 7.11 56.52 0.40 -6.11 16 20 C -0.08 -1.40 5.76 -104.62 -0.60 -2.01 16 21 C -0.13 -2.17 7.66 36.01 0.28 -1.90 16 22 H 0.07 0.71 8.14 -51.93 -0.42 0.28 16 23 H 0.06 0.63 8.09 -51.92 -0.42 0.21 16 24 H 0.08 0.83 5.89 -51.93 -0.31 0.52 16 25 H 0.13 1.68 8.06 -52.49 -0.42 1.26 16 26 H 0.30 5.90 8.90 -39.30 -0.35 5.55 16 27 H 0.34 7.00 4.86 -39.29 -0.19 6.81 16 28 H 0.29 8.58 6.40 -40.82 -0.26 8.32 16 29 H 0.06 0.96 7.27 -51.93 -0.38 0.59 16 30 H 0.06 0.84 5.74 -51.93 -0.30 0.54 16 31 H 0.11 2.19 4.80 -51.93 -0.25 1.94 16 LS Contribution 269.02 15.07 4.05 4.05 Total: -1.00 -28.71 269.02 -6.99 -35.70 By element: Atomic # 1 Polarization: 12.72 SS G_CDS: -2.82 Total: 9.90 kcal Atomic # 6 Polarization: -18.34 SS G_CDS: -2.50 Total: -20.84 kcal Atomic # 7 Polarization: -43.99 SS G_CDS: 0.70 Total: -43.29 kcal Atomic # 9 Polarization: -2.42 SS G_CDS: 0.04 Total: -2.38 kcal Atomic # 14 Polarization: 24.37 SS G_CDS: -5.08 Total: 19.29 kcal Atomic # 17 Polarization: -1.05 SS G_CDS: -1.38 Total: -2.44 kcal Total LS contribution 4.05 Total: 4.05 kcal Total: -28.71 -6.99 -35.70 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259989447.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.846 kcal (2) G-P(sol) polarization free energy of solvation -28.710 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.864 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.991 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.701 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.854 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds