Wall clock time and date at job start Mon Mar 30 2020 07:07:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50691 * 1 3 3 C 1.38268 * 119.96895 * 2 1 4 4 C 1.38276 * 120.01444 * 179.97438 * 3 2 1 5 5 Cl 1.73595 * 120.02579 * 180.02562 * 4 3 2 6 6 C 1.38594 * 119.94803 * 0.02562 * 4 3 2 7 7 F 1.35098 * 120.02735 * 180.02562 * 6 4 3 8 8 C 1.38405 * 119.94057 * 0.02562 * 6 4 3 9 9 C 1.50698 * 120.00435 * 180.02562 * 8 6 4 10 10 H 1.09004 * 109.47437 * 359.97438 * 9 8 6 11 11 C 1.50701 * 109.47344 * 119.99608 * 9 8 6 12 12 H 1.08005 * 120.00046 * 35.03489 * 11 9 8 13 13 C 1.37879 * 120.00109 * 215.04015 * 11 9 8 14 14 N 1.31516 * 119.99801 * 184.78247 * 13 11 9 15 15 Si 1.86800 * 119.99999 * 4.78286 * 13 11 9 16 16 H 1.48501 * 109.46748 * 84.85616 * 15 13 11 17 17 H 1.48503 * 109.46900 * 204.85719 * 15 13 11 18 18 H 1.48494 * 109.47185 * 324.86079 * 15 13 11 19 19 C 1.52998 * 109.47129 * 239.99545 * 9 8 6 20 20 N 1.46898 * 109.47035 * 65.26870 * 19 9 8 21 21 C 1.38227 * 119.97277 * 180.27586 * 2 1 3 22 22 H 1.09000 * 109.47495 * 89.99930 * 1 2 3 23 23 H 1.09005 * 109.46972 * 210.00098 * 1 2 3 24 24 H 1.08999 * 109.47744 * 329.99720 * 1 2 3 25 25 H 1.07995 * 119.98687 * 359.97438 * 3 2 1 26 26 H 0.96998 * 120.00106 * 179.97438 * 14 13 11 27 27 H 1.09001 * 109.47269 * 185.27538 * 19 9 8 28 28 H 1.09004 * 109.46794 * 305.27048 * 19 9 8 29 29 H 1.00899 * 111.00148 * 56.05358 * 20 19 9 30 30 H 1.00901 * 111.00162 * 179.97438 * 20 19 9 31 31 H 1.07998 * 119.97072 * 0.04583 * 21 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1976 1.1978 0.0000 4 6 3.5804 1.1989 0.0005 5 17 4.4478 2.7026 0.0012 6 6 4.2732 -0.0014 0.0005 7 9 5.6242 -0.0022 0.0016 8 6 3.5798 -1.1993 -0.0005 9 6 4.3317 -2.5053 0.0000 10 1 5.4036 -2.3074 0.0009 11 6 3.9653 -3.2953 1.2299 12 1 2.9602 -3.2484 1.6224 13 6 4.9133 -4.0780 1.8543 14 7 4.5714 -4.8400 2.8702 15 14 6.6831 -4.0561 1.2571 16 1 7.4047 -2.9225 1.8891 17 1 7.3460 -5.3326 1.6266 18 1 6.7055 -3.8959 -0.2190 19 6 3.9624 -3.3069 -1.2497 20 7 4.4330 -2.5945 -2.4451 21 6 2.1975 -1.1974 -0.0058 22 1 -0.3634 0.0000 -1.0276 23 1 -0.3633 -0.8900 0.5139 24 1 -0.3634 0.8899 0.5139 25 1 1.6569 2.1327 -0.0004 26 1 5.2382 -5.3909 3.3092 27 1 4.4326 -4.2892 -1.2034 28 1 2.8799 -3.4243 -1.2993 29 1 5.4248 -2.4162 -2.3929 30 1 4.2014 -3.1043 -3.2845 31 1 1.6566 -2.1321 -0.0110 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260095220.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:07:52 Heat of formation + Delta-G solvation = -44.160116 kcal Electronic energy + Delta-G solvation = -17174.429468 eV Core-core repulsion = 14202.308195 eV Total energy + Delta-G solvation = -2972.121274 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 257.068 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -48.28052 -38.99090 -36.38558 -35.43248 -32.50767 -31.99621 -30.90114 -28.08822 -26.33269 -23.86384 -22.99390 -21.21878 -19.41124 -17.42514 -17.01469 -16.04296 -15.34758 -15.21125 -14.92649 -14.38311 -13.75047 -13.59809 -13.41085 -13.25663 -12.98127 -12.53329 -12.28122 -12.14175 -11.94125 -11.52359 -11.31479 -11.08158 -10.82120 -10.76217 -10.38490 -10.00423 -9.88841 -9.40693 -8.69248 -8.18334 -8.06188 -7.90397 -6.23814 -4.25652 1.52161 1.70807 2.36706 3.20285 3.27683 3.30886 4.00381 4.28527 4.68446 4.99721 5.08132 5.29242 5.37210 5.48529 5.61011 5.71527 5.78731 6.00293 6.06158 6.27605 6.31123 6.46336 6.48719 6.69926 6.72485 6.94791 7.18270 7.32138 7.45573 7.76142 7.96787 8.32592 8.80175 9.37065 10.88120 Molecular weight = 257.07amu Principal moments of inertia in cm(-1) A = 0.019871 B = 0.008352 C = 0.007320 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1408.737770 B = 3351.538001 C = 3824.110417 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.107 4.107 2 C -0.090 4.090 3 C -0.113 4.113 4 C -0.067 4.067 5 Cl -0.075 7.075 6 C 0.093 3.907 7 F -0.133 7.133 8 C -0.023 4.023 9 C 0.047 3.953 10 H 0.046 0.954 11 C -0.513 4.513 12 H 0.081 0.919 13 C 0.078 3.922 14 N -0.889 5.889 15 Si 0.874 3.126 16 H -0.271 1.271 17 H -0.287 1.287 18 H -0.268 1.268 19 C 0.069 3.931 20 N -0.856 5.856 21 C -0.078 4.078 22 H 0.068 0.932 23 H 0.069 0.931 24 H 0.063 0.937 25 H 0.130 0.870 26 H 0.267 0.733 27 H 0.026 0.974 28 H 0.066 0.934 29 H 0.332 0.668 30 H 0.327 0.673 31 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.184 8.944 -7.600 12.460 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.164 4.164 2 C -0.090 4.090 3 C -0.132 4.132 4 C -0.095 4.095 5 Cl -0.046 7.046 6 C 0.073 3.927 7 F -0.112 7.112 8 C -0.024 4.024 9 C 0.028 3.972 10 H 0.064 0.936 11 C -0.550 4.550 12 H 0.099 0.901 13 C -0.126 4.126 14 N -0.526 5.526 15 Si 0.701 3.299 16 H -0.197 1.197 17 H -0.213 1.213 18 H -0.193 1.193 19 C -0.062 4.062 20 N -0.384 5.384 21 C -0.096 4.096 22 H 0.087 0.913 23 H 0.088 0.912 24 H 0.082 0.918 25 H 0.148 0.852 26 H 0.077 0.923 27 H 0.044 0.956 28 H 0.084 0.916 29 H 0.144 0.856 30 H 0.138 0.862 31 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -4.490 9.508 -7.199 12.743 hybrid contribution 1.995 -0.755 -0.290 2.153 sum -2.495 8.753 -7.489 11.787 Atomic orbital electron populations 1.20719 0.90812 1.02774 1.02106 1.19795 0.96151 0.92377 1.00714 1.20507 0.90666 0.98495 1.03550 1.20831 0.92964 0.85423 1.10234 1.98330 1.77092 1.31938 1.97222 1.17274 0.77183 0.92502 1.05728 1.91453 1.28613 1.97156 1.93972 1.20191 0.94228 0.94263 0.93720 1.18317 0.95601 0.88632 0.94661 0.93580 1.20839 0.99440 1.25846 1.08913 0.90089 1.25030 0.98627 0.94451 0.94467 1.69875 1.34590 1.26155 1.21961 0.86904 0.85527 0.77765 0.79677 1.19659 1.21313 1.19272 1.22262 0.99772 0.94939 0.89201 1.58946 1.20998 1.53653 1.04804 1.20828 0.92960 0.97654 0.98156 0.91321 0.91207 0.91786 0.85206 0.92310 0.95581 0.91562 0.85649 0.86208 0.84823 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.26 10.01 36.00 0.36 -0.90 16 2 C -0.09 -1.40 5.88 -104.62 -0.62 -2.02 16 3 C -0.11 -1.76 9.48 -39.56 -0.38 -2.14 16 4 C -0.07 -1.19 6.33 -39.44 -0.25 -1.44 16 5 Cl -0.07 -1.18 28.62 -51.86 -1.48 -2.67 16 6 C 0.09 1.90 7.22 -39.39 -0.28 1.62 16 7 F -0.13 -2.86 15.77 2.25 0.04 -2.82 16 8 C -0.02 -0.47 4.51 -104.56 -0.47 -0.94 16 9 C 0.05 1.07 1.73 -92.93 -0.16 0.91 16 10 H 0.05 1.10 4.28 -51.93 -0.22 0.88 16 11 C -0.51 -13.55 8.64 -34.44 -0.30 -13.85 16 12 H 0.08 2.29 7.66 -52.48 -0.40 1.88 16 13 C 0.08 2.15 5.47 -17.82 -0.10 2.05 16 14 N -0.89 -26.03 13.96 55.43 0.77 -25.26 16 15 Si 0.87 21.11 26.99 -169.99 -4.59 16.53 16 16 H -0.27 -6.63 7.11 56.52 0.40 -6.22 16 17 H -0.29 -6.86 7.11 56.52 0.40 -6.46 16 18 H -0.27 -6.13 6.82 56.52 0.39 -5.75 16 19 C 0.07 1.37 6.05 -3.83 -0.02 1.34 16 20 N -0.86 -14.66 9.35 -10.37 -0.10 -14.76 16 21 C -0.08 -1.43 8.20 -39.59 -0.32 -1.75 16 22 H 0.07 0.71 8.14 -51.93 -0.42 0.29 16 23 H 0.07 0.79 8.09 -51.93 -0.42 0.37 16 24 H 0.06 0.64 8.08 -51.93 -0.42 0.22 16 25 H 0.13 1.65 8.06 -52.49 -0.42 1.23 16 26 H 0.27 7.36 8.31 -40.82 -0.34 7.02 16 27 H 0.03 0.54 8.14 -51.93 -0.42 0.12 16 28 H 0.07 1.27 7.21 -51.93 -0.37 0.90 16 29 H 0.33 5.67 8.99 -39.29 -0.35 5.31 16 30 H 0.33 4.66 9.08 -39.29 -0.36 4.31 16 31 H 0.13 2.39 7.47 -52.49 -0.39 2.00 16 LS Contribution 282.74 15.07 4.26 4.26 Total: -1.00 -28.74 282.74 -7.00 -35.74 By element: Atomic # 1 Polarization: 9.46 SS G_CDS: -3.36 Total: 6.10 kcal Atomic # 6 Polarization: -14.58 SS G_CDS: -2.54 Total: -17.12 kcal Atomic # 7 Polarization: -40.69 SS G_CDS: 0.68 Total: -40.02 kcal Atomic # 9 Polarization: -2.86 SS G_CDS: 0.04 Total: -2.82 kcal Atomic # 14 Polarization: 21.11 SS G_CDS: -4.59 Total: 16.53 kcal Atomic # 17 Polarization: -1.18 SS G_CDS: -1.48 Total: -2.67 kcal Total LS contribution 4.26 Total: 4.26 kcal Total: -28.74 -7.00 -35.74 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260095220.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.425 kcal (2) G-P(sol) polarization free energy of solvation -28.738 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.163 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.997 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.735 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.160 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds