Wall clock time and date at job start Mon Mar 30 2020 07:07:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 C 1.38250 * 119.97685 * 2 1 4 4 C 1.38185 * 120.03515 * 180.02562 * 3 2 1 5 5 C 1.38490 * 119.99919 * 359.72319 * 4 3 2 6 6 F 1.35104 * 120.02121 * 180.27411 * 5 4 3 7 7 C 1.38415 * 119.96307 * 0.57516 * 5 4 3 8 8 C 1.50699 * 120.01904 * 179.70160 * 7 5 4 9 9 H 1.09001 * 109.46940 * 194.72778 * 8 7 5 10 10 N 1.46901 * 109.47208 * 314.72456 * 8 7 5 11 11 C 1.53001 * 109.47405 * 74.72601 * 8 7 5 12 12 C 1.50694 * 109.47168 * 174.99864 * 11 8 7 13 13 H 1.08000 * 120.00563 * 359.97438 * 12 11 8 14 14 C 1.37885 * 119.99902 * 179.97438 * 12 11 8 15 15 N 1.31518 * 119.99792 * 179.72330 * 14 12 11 16 16 Si 1.86795 * 120.00009 * 0.02562 * 14 12 11 17 17 H 1.48501 * 109.47088 * 89.99795 * 16 14 12 18 18 H 1.48495 * 109.47293 * 209.99997 * 16 14 12 19 19 H 1.48507 * 109.47015 * 329.99955 * 16 14 12 20 20 C 1.38335 * 119.96144 * 359.42508 * 7 5 4 21 21 Cl 1.73601 * 120.00165 * 180.29867 * 20 7 5 22 22 H 1.09003 * 109.47593 * 269.97861 * 1 2 3 23 23 H 1.09005 * 109.47430 * 29.97998 * 1 2 3 24 24 H 1.09004 * 109.46985 * 149.97633 * 1 2 3 25 25 H 1.07992 * 119.98303 * 0.02562 * 3 2 1 26 26 H 1.07998 * 120.00416 * 179.97438 * 4 3 2 27 27 H 1.00896 * 111.00217 * 60.00192 * 10 8 7 28 28 H 1.00901 * 111.00032 * 183.96147 * 10 8 7 29 29 H 1.08998 * 109.46837 * 54.99885 * 11 8 7 30 30 H 1.09002 * 109.46926 * 294.99689 * 11 8 7 31 31 H 0.97000 * 119.99468 * 179.97438 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1977 1.1976 0.0000 4 6 3.5796 1.1990 -0.0005 5 6 4.2732 0.0003 0.0047 6 9 5.6243 0.0012 0.0098 7 6 3.5816 -1.1987 -0.0015 8 6 4.3352 -2.5037 -0.0026 9 1 3.6571 -3.3145 -0.2689 10 7 5.4278 -2.4375 -0.9823 11 6 4.9141 -2.7596 1.3904 12 6 5.5618 -4.1198 1.4230 13 1 5.5605 -4.7401 0.5389 14 6 6.1564 -4.5726 2.5818 15 7 6.7169 -5.7620 2.6118 16 14 6.1582 -3.5003 4.1113 17 1 4.9439 -3.7856 4.9172 18 1 7.3689 -3.7930 4.9197 19 1 6.1630 -2.0697 3.7128 20 6 2.1983 -1.1983 -0.0010 21 17 1.3298 -2.7015 -0.0010 22 1 -0.3634 -0.0004 1.0277 23 1 -0.3634 0.8902 -0.5135 24 1 -0.3633 -0.8898 -0.5142 25 1 1.6571 2.1324 0.0004 26 1 4.1187 2.1348 -0.0010 27 1 6.0706 -1.6930 -0.7573 28 1 5.9082 -3.3223 -1.0486 29 1 4.1136 -2.7205 2.1292 30 1 5.6583 -1.9971 1.6202 31 1 7.1355 -6.0803 3.4269 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260109822.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:07:14 Heat of formation + Delta-G solvation = -39.514734 kcal Electronic energy + Delta-G solvation = -17095.521896 eV Core-core repulsion = 14123.602062 eV Total energy + Delta-G solvation = -2971.919835 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 257.068 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -48.76400 -39.41638 -36.26907 -35.82536 -32.61693 -32.05164 -30.41310 -28.57258 -26.61184 -24.66062 -22.51719 -21.64315 -19.69378 -17.53708 -17.21263 -16.62803 -15.55559 -15.21370 -14.54498 -14.40945 -14.15123 -14.00923 -13.82086 -13.33262 -13.14508 -12.64029 -12.33532 -12.11289 -11.97468 -11.87268 -11.46522 -11.14402 -10.98863 -10.74146 -10.35912 -10.24495 -9.75098 -9.26073 -8.70063 -8.60905 -8.39265 -7.83222 -6.11759 -4.11062 1.08372 1.20771 2.25268 3.26348 3.33835 3.38202 3.49629 4.38132 4.39417 4.67453 4.75055 4.92842 5.13887 5.21080 5.43205 5.52829 5.54980 5.67027 5.80277 5.92120 6.09671 6.11610 6.29474 6.45359 6.46485 6.82413 7.00931 7.21414 7.66746 7.92540 8.24053 8.42725 8.90470 9.50285 11.00835 Molecular weight = 257.07amu Principal moments of inertia in cm(-1) A = 0.022320 B = 0.007653 C = 0.006894 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1254.179581 B = 3657.756475 C = 4060.392631 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.090 4.090 3 C -0.097 4.097 4 C -0.148 4.148 5 C 0.112 3.888 6 F -0.126 7.126 7 C -0.075 4.075 8 C 0.130 3.870 9 H 0.097 0.903 10 N -0.845 5.845 11 C -0.036 4.036 12 C -0.522 4.522 13 H 0.076 0.924 14 C 0.072 3.928 15 N -0.898 5.898 16 Si 0.876 3.124 17 H -0.276 1.276 18 H -0.286 1.286 19 H -0.267 1.267 20 C -0.012 4.012 21 Cl -0.049 7.049 22 H 0.074 0.926 23 H 0.069 0.931 24 H 0.074 0.926 25 H 0.137 0.863 26 H 0.137 0.863 27 H 0.336 0.664 28 H 0.353 0.647 29 H 0.015 0.985 30 H 0.018 0.982 31 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.824 13.926 -5.051 18.347 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.091 4.091 3 C -0.115 4.115 4 C -0.167 4.167 5 C 0.092 3.908 6 F -0.104 7.104 7 C -0.077 4.077 8 C 0.019 3.981 9 H 0.114 0.886 10 N -0.378 5.378 11 C -0.075 4.075 12 C -0.559 4.559 13 H 0.094 0.906 14 C -0.130 4.130 15 N -0.536 5.536 16 Si 0.703 3.297 17 H -0.202 1.202 18 H -0.212 1.212 19 H -0.191 1.191 20 C -0.039 4.039 21 Cl -0.020 7.020 22 H 0.093 0.907 23 H 0.088 0.912 24 H 0.092 0.908 25 H 0.154 0.846 26 H 0.155 0.845 27 H 0.151 0.849 28 H 0.168 0.832 29 H 0.033 0.967 30 H 0.037 0.963 31 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -11.311 13.796 -5.474 18.661 hybrid contribution 0.953 0.120 1.832 2.068 sum -10.358 13.916 -3.642 17.726 Atomic orbital electron populations 1.20830 0.90092 1.03355 1.02885 1.19742 0.96867 0.91193 1.01259 1.20675 0.92910 0.97244 1.00701 1.21156 0.94969 0.97025 1.03507 1.17279 0.77150 0.93282 1.03060 1.91382 1.28581 1.96786 1.93680 1.20123 0.92462 0.96358 0.98806 1.20443 0.93254 0.90924 0.93524 0.88551 1.59310 1.16480 1.11606 1.50428 1.20280 0.96176 0.98343 0.92674 1.20965 1.35900 0.99741 0.99327 0.90634 1.24964 0.94625 0.94766 0.98637 1.69904 1.37562 1.17864 1.28252 0.86833 0.77733 0.81659 0.83461 1.20160 1.21238 1.19124 1.20384 0.91045 0.87413 1.05058 1.98361 1.75513 1.31515 1.96626 0.90701 0.91193 0.90756 0.84552 0.84490 0.84875 0.83211 0.96653 0.96326 0.92622 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.12 9.61 36.00 0.35 -0.78 16 2 C -0.09 -1.16 5.88 -104.58 -0.62 -1.78 16 3 C -0.10 -1.12 9.70 -39.60 -0.38 -1.50 16 4 C -0.15 -1.94 10.03 -39.51 -0.40 -2.34 16 5 C 0.11 1.89 7.01 -39.42 -0.28 1.61 16 6 F -0.13 -2.25 13.92 2.25 0.03 -2.21 16 7 C -0.08 -1.38 4.95 -104.52 -0.52 -1.89 16 8 C 0.13 2.72 2.70 -68.86 -0.19 2.53 16 9 H 0.10 2.08 6.37 -51.93 -0.33 1.74 16 10 N -0.85 -16.94 9.08 -5.65 -0.05 -16.99 16 11 C -0.04 -0.87 3.61 -27.89 -0.10 -0.97 16 12 C -0.52 -14.59 9.10 -34.44 -0.31 -14.90 16 13 H 0.08 2.24 7.39 -52.49 -0.39 1.85 16 14 C 0.07 2.09 5.47 -17.82 -0.10 1.99 16 15 N -0.90 -27.38 13.96 55.43 0.77 -26.61 16 16 Si 0.88 22.00 27.47 -169.99 -4.67 17.33 16 17 H -0.28 -6.83 7.11 56.52 0.40 -6.43 16 18 H -0.29 -7.10 7.11 56.52 0.40 -6.70 16 19 H -0.27 -6.56 6.54 56.52 0.37 -6.19 16 20 C -0.01 -0.19 6.31 -39.51 -0.25 -0.44 16 21 Cl -0.05 -0.78 25.41 -51.86 -1.32 -2.10 16 22 H 0.07 0.68 8.14 -51.93 -0.42 0.25 16 23 H 0.07 0.53 8.09 -51.93 -0.42 0.11 16 24 H 0.07 0.74 6.90 -51.93 -0.36 0.39 16 25 H 0.14 1.10 8.06 -52.49 -0.42 0.68 16 26 H 0.14 1.43 8.06 -52.49 -0.42 1.00 16 27 H 0.34 6.58 6.15 -39.29 -0.24 6.34 16 28 H 0.35 7.33 7.90 -39.29 -0.31 7.02 16 29 H 0.02 0.38 7.57 -51.93 -0.39 -0.02 16 30 H 0.02 0.46 6.77 -51.93 -0.35 0.11 16 31 H 0.26 7.57 8.31 -40.82 -0.34 7.23 16 LS Contribution 274.67 15.07 4.14 4.14 Total: -1.00 -30.39 274.67 -7.11 -37.50 By element: Atomic # 1 Polarization: 10.63 SS G_CDS: -3.23 Total: 7.40 kcal Atomic # 6 Polarization: -15.67 SS G_CDS: -2.79 Total: -18.46 kcal Atomic # 7 Polarization: -44.32 SS G_CDS: 0.72 Total: -43.60 kcal Atomic # 9 Polarization: -2.25 SS G_CDS: 0.03 Total: -2.21 kcal Atomic # 14 Polarization: 22.00 SS G_CDS: -4.67 Total: 17.33 kcal Atomic # 17 Polarization: -0.78 SS G_CDS: -1.32 Total: -2.10 kcal Total LS contribution 4.14 Total: 4.14 kcal Total: -30.39 -7.11 -37.50 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260109822.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.013 kcal (2) G-P(sol) polarization free energy of solvation -30.389 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.401 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.113 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.502 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.515 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds