Wall clock time and date at job start Mon Mar 30 2020 06:37:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.52996 * 109.46913 * 2 1 4 4 C 1.50703 * 109.46924 * 240.00292 * 2 1 3 5 5 H 1.08001 * 120.00037 * 239.99256 * 4 2 1 6 6 C 1.37879 * 119.99824 * 59.99897 * 4 2 1 7 7 N 1.31512 * 120.00502 * 0.02562 * 6 4 2 8 8 Si 1.86805 * 119.99575 * 179.97438 * 6 4 2 9 9 H 1.48501 * 109.47245 * 60.00392 * 8 6 4 10 10 H 1.48504 * 109.46709 * 180.02562 * 8 6 4 11 11 H 1.48500 * 109.47176 * 299.99915 * 8 6 4 12 12 N 1.46499 * 109.47320 * 120.00272 * 2 1 3 13 13 C 1.34777 * 119.99665 * 300.27951 * 12 2 1 14 14 O 1.21713 * 120.00187 * 359.72121 * 13 12 2 15 15 C 1.46519 * 119.99590 * 179.72452 * 13 12 2 16 16 C 1.36619 * 125.97814 * 179.97438 * 15 13 12 17 17 C 1.40241 * 106.73882 * 179.97438 * 16 15 13 18 18 C 1.35369 * 107.12237 * 359.97438 * 17 16 15 19 19 Cl 1.73594 * 125.63657 * 179.97438 * 18 17 16 20 20 O 1.33959 * 108.72956 * 359.75958 * 18 17 16 21 21 H 1.08998 * 109.47212 * 299.99241 * 1 2 3 22 22 H 1.09000 * 109.47221 * 60.00430 * 1 2 3 23 23 H 1.09006 * 109.47154 * 179.97438 * 1 2 3 24 24 H 1.08995 * 109.47223 * 179.97438 * 3 2 1 25 25 H 1.08996 * 109.47179 * 300.00478 * 3 2 1 26 26 H 1.09004 * 109.46762 * 59.99989 * 3 2 1 27 27 H 0.96997 * 120.00009 * 180.02562 * 7 6 4 28 28 H 0.97001 * 119.99790 * 119.99664 * 12 2 1 29 29 H 1.08006 * 126.62677 * 359.94764 * 16 15 13 30 30 H 1.08007 * 126.44504 * 180.02562 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0323 -0.7104 -1.2305 5 1 2.6533 -1.5884 -1.1315 6 6 1.6992 -0.2392 -2.4828 7 7 0.9435 0.8303 -2.6034 8 14 2.3224 -1.1194 -4.0080 9 1 1.8279 -2.5197 -4.0084 10 1 1.8278 -0.4190 -5.2205 11 1 3.8074 -1.1188 -4.0079 12 7 2.0184 -0.6906 1.1961 13 6 1.6882 -0.2335 2.4202 14 8 0.9884 0.7561 2.5319 15 6 2.1716 -0.9278 3.6165 16 6 1.9135 -0.5724 4.9101 17 6 2.5685 -1.5077 5.7243 18 6 3.1912 -2.3847 4.9024 19 17 4.1466 -3.7426 5.4093 20 8 2.9444 -2.0344 3.6332 21 1 -0.3633 0.5137 0.8900 22 1 -0.3634 0.5138 -0.8900 23 1 -0.3634 -1.0277 -0.0005 24 1 3.1299 1.4425 0.0005 25 1 1.6766 1.9563 -0.8899 26 1 1.6766 1.9563 0.8900 27 1 0.7089 1.1615 -3.4844 28 1 2.5761 -1.4793 1.1070 29 1 1.3200 0.2669 5.2416 30 1 2.5744 -1.5255 6.8042 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260204478.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:37:03 Heat of formation + Delta-G solvation = -21.554604 kcal Electronic energy + Delta-G solvation = -16947.727887 eV Core-core repulsion = 13964.214073 eV Total energy + Delta-G solvation = -2983.513814 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 257.061 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -42.70765 -39.02882 -37.17964 -35.47933 -33.28238 -32.47909 -30.46761 -28.78096 -25.61804 -25.34011 -23.33526 -21.96764 -20.59981 -19.06006 -18.35789 -16.97314 -16.53062 -15.83508 -15.15132 -14.34565 -13.98910 -13.72769 -13.54223 -13.10271 -12.99612 -12.43998 -12.31644 -12.00790 -11.58071 -11.36042 -11.17806 -11.06404 -10.55070 -10.39506 -10.21961 -10.12917 -9.83171 -9.49081 -8.72179 -8.66517 -8.50383 -8.00421 -6.12523 -4.24987 0.99420 1.05597 2.21281 3.19998 3.24387 3.29630 3.31646 3.67071 3.98878 4.34491 4.73102 5.15599 5.15812 5.38957 5.62615 5.74158 6.17173 6.61303 6.70189 6.87654 6.89243 7.19381 7.25596 7.49230 7.57362 7.58853 7.71476 7.98501 8.20531 8.56144 8.67114 8.93693 9.42518 10.89279 Molecular weight = 257.06amu Principal moments of inertia in cm(-1) A = 0.029621 B = 0.005325 C = 0.004653 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 945.044748 B = 5256.463877 C = 6015.748596 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.289 3.711 3 C -0.148 4.148 4 C -0.528 4.528 5 H 0.061 0.939 6 C 0.071 3.929 7 N -0.879 5.879 8 Si 0.903 3.097 9 H -0.276 1.276 10 H -0.285 1.285 11 H -0.276 1.276 12 N -0.688 5.688 13 C 0.585 3.415 14 O -0.520 6.520 15 C -0.035 4.035 16 C -0.135 4.135 17 C -0.182 4.182 18 C 0.034 3.966 19 Cl 0.024 6.976 20 O -0.154 6.154 21 H 0.036 0.964 22 H 0.091 0.909 23 H 0.024 0.976 24 H 0.024 0.976 25 H 0.091 0.909 26 H 0.035 0.965 27 H 0.265 0.735 28 H 0.394 0.606 29 H 0.168 0.832 30 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.035 -5.775 13.414 15.151 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C 0.207 3.793 3 C -0.206 4.206 4 C -0.567 4.567 5 H 0.079 0.921 6 C -0.132 4.132 7 N -0.516 5.516 8 Si 0.730 3.270 9 H -0.202 1.202 10 H -0.211 1.211 11 H -0.202 1.202 12 N -0.335 5.335 13 C 0.368 3.632 14 O -0.400 6.400 15 C -0.088 4.088 16 C -0.155 4.155 17 C -0.202 4.202 18 C -0.044 4.044 19 Cl 0.053 6.947 20 O -0.051 6.051 21 H 0.055 0.945 22 H 0.109 0.891 23 H 0.043 0.957 24 H 0.043 0.957 25 H 0.109 0.891 26 H 0.054 0.946 27 H 0.075 0.925 28 H 0.227 0.773 29 H 0.186 0.814 30 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 3.635 -5.208 13.034 14.499 hybrid contribution 0.793 -1.132 -0.630 1.519 sum 4.428 -6.340 12.404 14.617 Atomic orbital electron populations 1.22102 0.97005 0.99389 1.02158 1.18283 0.91555 0.89865 0.79609 1.22096 0.98275 0.98106 1.02139 1.21059 1.32878 1.12790 0.89943 0.92132 1.24800 0.94644 0.94896 0.98886 1.69814 1.35686 1.22255 1.23846 0.86488 0.79149 0.79626 0.81716 1.20186 1.21086 1.20189 1.46725 1.50200 1.30730 1.05826 1.16629 0.81351 0.83857 0.81394 1.90823 1.38638 1.25284 1.85250 1.23043 0.99343 0.88623 0.97820 1.21884 1.01896 1.01267 0.90491 1.21470 1.01954 0.95856 1.00943 1.22756 1.02779 0.95517 0.83357 1.98428 1.69024 1.40438 1.86857 1.84033 1.55044 1.38400 1.27639 0.94529 0.89092 0.95728 0.95720 0.89086 0.94570 0.92498 0.77255 0.81431 0.81866 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.70 8.17 37.16 0.30 -3.39 16 2 C 0.29 7.11 0.78 -132.97 -0.10 7.00 16 3 C -0.15 -3.69 8.18 37.16 0.30 -3.38 16 4 C -0.53 -13.66 8.18 -34.44 -0.28 -13.94 16 5 H 0.06 1.52 7.60 -52.49 -0.40 1.12 16 6 C 0.07 1.85 5.15 -17.82 -0.09 1.75 16 7 N -0.88 -23.50 9.35 55.43 0.52 -22.98 16 8 Si 0.90 20.27 29.54 -169.99 -5.02 15.25 16 9 H -0.28 -6.18 7.11 56.52 0.40 -5.77 16 10 H -0.29 -6.38 7.11 56.52 0.40 -5.98 16 11 H -0.28 -6.18 7.11 56.52 0.40 -5.78 16 12 N -0.69 -14.71 5.09 -50.02 -0.25 -14.97 16 13 C 0.58 11.92 7.20 -12.92 -0.09 11.83 16 14 O -0.52 -11.84 13.07 5.18 0.07 -11.78 16 15 C -0.04 -0.59 7.13 -36.83 -0.26 -0.86 16 16 C -0.13 -1.90 10.62 -39.41 -0.42 -2.32 16 17 C -0.18 -2.15 10.84 -39.85 -0.43 -2.58 16 18 C 0.03 0.45 7.93 29.71 0.24 0.68 16 19 Cl 0.02 0.25 29.30 -51.86 -1.52 -1.27 16 20 O -0.15 -2.43 10.40 4.73 0.05 -2.38 16 21 H 0.04 0.90 6.15 -51.93 -0.32 0.58 16 22 H 0.09 2.42 6.07 -51.93 -0.32 2.11 16 23 H 0.02 0.58 8.14 -51.93 -0.42 0.16 16 24 H 0.02 0.59 8.14 -51.93 -0.42 0.16 16 25 H 0.09 2.42 6.07 -51.93 -0.32 2.11 16 26 H 0.04 0.89 6.17 -51.93 -0.32 0.56 16 27 H 0.26 6.78 8.31 -40.82 -0.34 6.45 16 28 H 0.39 7.71 8.07 -40.82 -0.33 7.38 16 29 H 0.17 2.13 8.06 -52.48 -0.42 1.71 16 30 H 0.16 1.39 8.06 -52.48 -0.42 0.96 16 LS Contribution 273.09 15.07 4.12 4.12 Total: -1.00 -27.74 273.09 -5.71 -33.45 By element: Atomic # 1 Polarization: 8.59 SS G_CDS: -2.82 Total: 5.76 kcal Atomic # 6 Polarization: -4.37 SS G_CDS: -0.84 Total: -5.21 kcal Atomic # 7 Polarization: -38.21 SS G_CDS: 0.26 Total: -37.95 kcal Atomic # 8 Polarization: -14.27 SS G_CDS: 0.12 Total: -14.15 kcal Atomic # 14 Polarization: 20.27 SS G_CDS: -5.02 Total: 15.25 kcal Atomic # 17 Polarization: 0.25 SS G_CDS: -1.52 Total: -1.27 kcal Total LS contribution 4.12 Total: 4.12 kcal Total: -27.74 -5.71 -33.45 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260204478.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.896 kcal (2) G-P(sol) polarization free energy of solvation -27.742 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.846 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.708 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.450 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.555 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds