Wall clock time and date at job start Mon Mar 30 2020 07:06:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 C 1.38267 * 119.97023 * 2 1 4 4 C 1.38275 * 120.01351 * 179.76779 * 3 2 1 5 5 Cl 1.73596 * 120.02559 * 180.25579 * 4 3 2 6 6 C 1.38595 * 119.94861 * 0.46503 * 4 3 2 7 7 F 1.35104 * 120.02787 * 179.78789 * 6 4 3 8 8 C 1.38397 * 119.93810 * 359.51551 * 6 4 3 9 9 C 1.50699 * 120.00433 * 180.27551 * 8 6 4 10 10 H 1.09000 * 109.47156 * 164.99868 * 9 8 6 11 11 N 1.46902 * 109.47321 * 44.99413 * 9 8 6 12 12 C 1.50703 * 109.47466 * 284.99826 * 9 8 6 13 13 H 1.08010 * 119.99472 * 359.97438 * 12 9 8 14 14 C 1.37875 * 120.00382 * 179.97438 * 12 9 8 15 15 N 1.31509 * 119.99895 * 0.02562 * 14 12 9 16 16 Si 1.86802 * 119.99706 * 179.97438 * 14 12 9 17 17 H 1.48501 * 109.47097 * 90.00523 * 16 14 12 18 18 H 1.48505 * 109.47169 * 209.99872 * 16 14 12 19 19 H 1.48495 * 109.47568 * 330.00070 * 16 14 12 20 20 C 1.38217 * 119.97293 * 179.97438 * 2 1 3 21 21 C 1.50704 * 119.97399 * 359.97438 * 20 2 1 22 22 H 1.09007 * 109.47019 * 270.02066 * 1 2 3 23 23 H 1.09003 * 109.47401 * 30.01814 * 1 2 3 24 24 H 1.09003 * 109.47293 * 150.02309 * 1 2 3 25 25 H 1.08001 * 119.98762 * 0.02562 * 3 2 1 26 26 H 1.00891 * 111.00443 * 300.00449 * 11 9 8 27 27 H 1.00902 * 110.99597 * 63.95728 * 11 9 8 28 28 H 0.97001 * 119.99629 * 180.02562 * 15 14 12 29 29 H 1.09000 * 109.47113 * 270.02034 * 21 20 2 30 30 H 1.09001 * 109.46730 * 30.02030 * 21 20 2 31 31 H 1.08997 * 109.47259 * 150.02069 * 21 20 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1977 1.1978 0.0000 4 6 3.5804 1.1988 0.0049 5 17 4.4479 2.7025 0.0116 6 6 4.2732 -0.0015 0.0000 7 9 5.6243 -0.0023 0.0004 8 6 3.5798 -1.1992 0.0004 9 6 4.3317 -2.5053 0.0014 10 1 3.6526 -3.3152 0.2676 11 7 5.4245 -2.4405 0.9809 12 6 4.9015 -2.7580 -1.3707 13 1 4.7353 -2.0443 -2.1642 14 6 5.6348 -3.9001 -1.6131 15 7 5.8366 -4.7693 -0.6470 16 14 6.3404 -4.2136 -3.3141 17 1 7.6991 -3.6211 -3.4032 18 1 6.4217 -5.6768 -3.5543 19 1 5.4613 -3.5922 -4.3369 20 6 2.1975 -1.1973 0.0005 21 6 1.4427 -2.5018 0.0017 22 1 -0.3633 0.0004 1.0277 23 1 -0.3634 0.8898 -0.5141 24 1 -0.3634 -0.8902 -0.5135 25 1 1.6570 2.1327 0.0004 26 1 6.0682 -1.6969 0.7560 27 1 5.0645 -2.3362 1.9178 28 1 6.3528 -5.5726 -0.8175 29 1 1.2609 -2.8154 1.0296 30 1 0.4904 -2.3709 -0.5122 31 1 2.0310 -3.2624 -0.5115 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260282838.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:06:39 Heat of formation + Delta-G solvation = -32.545686 kcal Electronic energy + Delta-G solvation = -17311.417149 eV Core-core repulsion = 14339.799515 eV Total energy + Delta-G solvation = -2971.617634 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 257.068 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -48.36089 -39.33530 -36.43703 -34.81555 -32.55392 -31.92020 -30.42074 -27.16008 -26.04326 -25.83876 -22.95055 -20.80082 -19.91427 -17.02413 -16.77406 -16.03585 -15.29457 -15.14021 -14.54322 -13.98579 -13.86750 -13.74431 -13.22391 -13.08518 -12.67995 -12.37347 -12.25745 -12.20360 -11.96842 -11.48345 -11.03820 -10.89480 -10.82766 -10.75034 -10.54372 -10.49015 -9.86296 -9.23489 -8.44652 -8.10882 -8.01917 -7.09052 -5.90361 -4.05275 1.37267 1.56080 2.30330 3.33820 3.40490 3.43371 3.80695 4.47922 4.60032 4.95228 5.14161 5.28311 5.33742 5.36994 5.62816 5.75176 5.82071 5.95392 6.07484 6.12240 6.24213 6.32640 6.39835 6.49601 6.66579 6.90677 7.24364 7.40010 7.87844 8.10751 8.61046 9.01428 9.11399 9.63233 11.13979 Molecular weight = 257.07amu Principal moments of inertia in cm(-1) A = 0.020417 B = 0.008196 C = 0.006772 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1371.109972 B = 3415.468947 C = 4133.449187 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 C -0.094 4.094 3 C -0.107 4.107 4 C -0.078 4.078 5 Cl -0.072 7.072 6 C 0.107 3.893 7 F -0.119 7.119 8 C -0.096 4.096 9 C 0.255 3.745 10 H 0.061 0.939 11 N -0.816 5.816 12 C -0.531 4.531 13 H 0.052 0.948 14 C 0.086 3.914 15 N -0.845 5.845 16 Si 0.884 3.116 17 H -0.280 1.280 18 H -0.286 1.286 19 H -0.275 1.275 20 C -0.056 4.056 21 C -0.120 4.120 22 H 0.069 0.931 23 H 0.063 0.937 24 H 0.073 0.927 25 H 0.131 0.869 26 H 0.328 0.672 27 H 0.295 0.705 28 H 0.256 0.744 29 H 0.069 0.931 30 H 0.066 0.934 31 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.447 9.414 2.610 13.590 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.095 4.095 3 C -0.126 4.126 4 C -0.105 4.105 5 Cl -0.043 7.043 6 C 0.087 3.913 7 F -0.097 7.097 8 C -0.100 4.100 9 C 0.145 3.855 10 H 0.079 0.921 11 N -0.345 5.345 12 C -0.569 4.569 13 H 0.070 0.930 14 C -0.121 4.121 15 N -0.479 5.479 16 Si 0.712 3.288 17 H -0.206 1.206 18 H -0.212 1.212 19 H -0.200 1.200 20 C -0.057 4.057 21 C -0.176 4.176 22 H 0.087 0.913 23 H 0.082 0.918 24 H 0.092 0.908 25 H 0.149 0.851 26 H 0.145 0.855 27 H 0.106 0.894 28 H 0.066 0.934 29 H 0.087 0.913 30 H 0.084 0.916 31 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -9.011 8.609 2.422 12.696 hybrid contribution 0.525 1.139 -0.768 1.471 sum -8.487 9.748 1.654 13.030 Atomic orbital electron populations 1.20792 0.90817 1.02851 1.02196 1.19682 0.96132 0.91935 1.01740 1.20525 0.90721 0.98444 1.02905 1.20939 0.93036 0.85724 1.10826 1.98336 1.77001 1.31740 1.97208 1.17273 0.77501 0.92154 1.04401 1.91392 1.28088 1.96697 1.93570 1.21902 0.94293 0.97980 0.95821 1.18352 0.88497 0.85369 0.93266 0.92132 1.59239 1.18887 1.53922 1.02447 1.20757 1.36135 1.06415 0.93628 0.93000 1.24900 0.95322 0.95782 0.96083 1.70094 1.37349 1.09681 1.30808 0.86748 0.79765 0.77231 0.85094 1.20630 1.21199 1.19983 1.19645 0.92554 0.95185 0.98313 1.20940 0.99587 0.94756 1.02336 0.91270 0.91841 0.90812 0.85090 0.85541 0.89450 0.93360 0.91276 0.91580 0.89123 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.20 9.60 36.00 0.35 -0.85 16 2 C -0.09 -1.41 5.88 -104.62 -0.62 -2.03 16 3 C -0.11 -1.62 9.48 -39.56 -0.38 -2.00 16 4 C -0.08 -1.36 6.33 -39.44 -0.25 -1.61 16 5 Cl -0.07 -1.13 28.62 -51.86 -1.48 -2.61 16 6 C 0.11 2.18 6.98 -39.39 -0.28 1.90 16 7 F -0.12 -2.60 13.89 2.25 0.03 -2.56 16 8 C -0.10 -2.00 4.88 -104.56 -0.51 -2.51 16 9 C 0.25 6.17 2.32 -70.01 -0.16 6.00 16 10 H 0.06 1.53 5.92 -51.93 -0.31 1.22 16 11 N -0.82 -19.68 8.41 -6.65 -0.06 -19.73 16 12 C -0.53 -14.46 8.63 -34.44 -0.30 -14.75 16 13 H 0.05 1.45 7.74 -52.48 -0.41 1.04 16 14 C 0.09 2.39 5.39 -17.82 -0.10 2.29 16 15 N -0.84 -24.25 12.77 55.43 0.71 -23.55 16 16 Si 0.88 21.41 29.54 -169.99 -5.02 16.39 16 17 H -0.28 -6.85 7.11 56.52 0.40 -6.45 16 18 H -0.29 -6.82 7.11 56.52 0.40 -6.42 16 19 H -0.27 -6.59 7.11 56.52 0.40 -6.18 16 20 C -0.06 -0.98 5.88 -104.63 -0.62 -1.60 16 21 C -0.12 -1.86 8.83 36.01 0.32 -1.54 16 22 H 0.07 0.66 8.14 -51.92 -0.42 0.24 16 23 H 0.06 0.60 8.09 -51.93 -0.42 0.18 16 24 H 0.07 0.76 5.94 -51.93 -0.31 0.45 16 25 H 0.13 1.62 8.06 -52.49 -0.42 1.19 16 26 H 0.33 7.92 6.13 -39.30 -0.24 7.68 16 27 H 0.30 6.38 9.06 -39.29 -0.36 6.03 16 28 H 0.26 7.06 8.31 -40.82 -0.34 6.72 16 29 H 0.07 0.97 8.14 -51.93 -0.42 0.55 16 30 H 0.07 0.84 5.94 -51.93 -0.31 0.53 16 31 H 0.09 1.64 6.39 -51.93 -0.33 1.31 16 LS Contribution 276.61 15.07 4.17 4.17 Total: -1.00 -29.24 276.61 -7.27 -36.50 By element: Atomic # 1 Polarization: 11.17 SS G_CDS: -3.08 Total: 8.08 kcal Atomic # 6 Polarization: -14.16 SS G_CDS: -2.53 Total: -16.69 kcal Atomic # 7 Polarization: -43.93 SS G_CDS: 0.65 Total: -43.28 kcal Atomic # 9 Polarization: -2.60 SS G_CDS: 0.03 Total: -2.56 kcal Atomic # 14 Polarization: 21.41 SS G_CDS: -5.02 Total: 16.39 kcal Atomic # 17 Polarization: -1.13 SS G_CDS: -1.48 Total: -2.61 kcal Total LS contribution 4.17 Total: 4.17 kcal Total: -29.24 -7.27 -36.50 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260282838.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.959 kcal (2) G-P(sol) polarization free energy of solvation -29.236 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.277 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.268 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.504 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.546 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds