Wall clock time and date at job start Mon Mar 30 2020 06:37:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52997 * 109.47010 * 2 1 4 4 C 1.50700 * 109.47338 * 239.99592 * 2 1 3 5 5 H 1.08005 * 120.00138 * 240.00516 * 4 2 1 6 6 C 1.37878 * 119.99905 * 60.00416 * 4 2 1 7 7 N 1.31512 * 119.99736 * 359.97438 * 6 4 2 8 8 Si 1.86802 * 119.99821 * 180.02562 * 6 4 2 9 9 H 1.48499 * 109.47187 * 90.00081 * 8 6 4 10 10 H 1.48491 * 109.46881 * 209.99648 * 8 6 4 11 11 H 1.48501 * 109.47175 * 329.99672 * 8 6 4 12 12 N 1.46503 * 109.46621 * 119.99939 * 2 1 3 13 13 C 1.34778 * 120.00092 * 299.99772 * 12 2 1 14 14 O 1.21703 * 119.99593 * 0.02562 * 13 12 2 15 15 C 1.46655 * 120.00294 * 180.02562 * 13 12 2 16 16 C 1.36557 * 125.97840 * 180.02562 * 15 13 12 17 17 C 1.40428 * 106.70959 * 179.97438 * 16 15 13 18 18 Cl 1.73599 * 126.44806 * 179.97438 * 17 16 15 19 19 C 1.35206 * 107.09577 * 0.26052 * 17 16 15 20 20 O 1.33988 * 108.75045 * 359.56994 * 19 17 16 21 21 H 1.09000 * 109.47518 * 300.00190 * 1 2 3 22 22 H 1.08996 * 109.46845 * 60.00701 * 1 2 3 23 23 H 1.08999 * 109.47075 * 179.97438 * 1 2 3 24 24 H 1.09005 * 109.47081 * 179.97438 * 3 2 1 25 25 H 1.08996 * 109.47202 * 299.99088 * 3 2 1 26 26 H 1.09000 * 109.47591 * 59.99852 * 3 2 1 27 27 H 0.97003 * 119.99430 * 179.97438 * 7 6 4 28 28 H 0.96995 * 120.00411 * 120.00518 * 12 2 1 29 29 H 1.07995 * 126.64372 * 359.93674 * 16 15 13 30 30 H 1.07996 * 125.61581 * 179.70463 * 19 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0324 -0.7105 -1.2304 5 1 2.6533 -1.5887 -1.1312 6 6 1.6994 -0.2395 -2.4827 7 7 0.9430 0.8295 -2.6034 8 14 2.3216 -1.1206 -4.0078 9 1 1.3429 -2.1619 -4.4118 10 1 2.4868 -0.1417 -5.1121 11 1 3.6295 -1.7586 -3.7120 12 7 2.0182 -0.6906 1.1962 13 6 1.6926 -0.2301 2.4203 14 8 0.9926 0.7592 2.5319 15 6 2.1818 -0.9211 3.6178 16 6 1.9278 -0.5627 4.9108 17 6 2.5882 -1.4965 5.7258 18 17 2.6055 -1.5205 7.4615 19 6 3.2133 -2.3694 4.9039 20 8 2.9608 -2.0223 3.6347 21 1 -0.3634 0.5138 0.8899 22 1 -0.3633 0.5137 -0.8900 23 1 -0.3633 -1.0277 -0.0005 24 1 3.1300 1.4425 0.0005 25 1 1.6768 1.9562 -0.8900 26 1 1.6767 1.9564 0.8899 27 1 0.7090 1.1611 -3.4845 28 1 2.5759 -1.4792 1.1074 29 1 1.3346 0.2766 5.2424 30 1 3.8148 -3.2092 5.2188 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260320644.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:37:06 Heat of formation + Delta-G solvation = -27.395311 kcal Electronic energy + Delta-G solvation = -16900.820810 eV Core-core repulsion = 13917.053723 eV Total energy + Delta-G solvation = -2983.767086 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 257.061 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -42.75886 -39.02465 -36.83102 -35.47779 -32.96627 -32.45213 -30.56253 -28.94491 -25.62153 -25.34827 -23.50148 -21.85848 -20.65838 -19.09929 -18.33355 -16.67763 -16.40861 -15.74621 -15.16541 -14.39237 -14.19213 -13.93235 -13.45043 -13.33386 -13.06097 -12.49949 -12.44905 -12.01803 -11.41132 -11.18472 -11.09078 -11.08033 -10.53516 -10.40003 -10.22614 -9.85180 -9.71779 -9.48994 -8.75004 -8.72005 -8.55271 -8.01521 -6.13367 -4.25816 1.11621 1.86634 2.08860 2.77797 3.22307 3.29536 3.31327 3.66631 3.92531 4.32648 4.64846 4.84752 5.15128 5.36788 5.51071 5.74749 6.04361 6.62673 6.70591 6.87234 6.89220 7.19137 7.25584 7.49114 7.56925 7.58332 7.71225 7.98100 8.20143 8.55799 8.66964 8.93755 9.41811 10.88483 Molecular weight = 257.06amu Principal moments of inertia in cm(-1) A = 0.047337 B = 0.004619 C = 0.004329 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 591.367250 B = 6060.415681 C = 6466.026634 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.289 3.711 3 C -0.148 4.148 4 C -0.528 4.528 5 H 0.061 0.939 6 C 0.071 3.929 7 N -0.879 5.879 8 Si 0.903 3.097 9 H -0.280 1.280 10 H -0.285 1.285 11 H -0.274 1.274 12 N -0.688 5.688 13 C 0.584 3.416 14 O -0.521 6.521 15 C -0.039 4.039 16 C -0.132 4.132 17 C -0.140 4.140 18 Cl -0.036 7.036 19 C -0.001 4.001 20 O -0.148 6.148 21 H 0.036 0.964 22 H 0.090 0.910 23 H 0.024 0.976 24 H 0.024 0.976 25 H 0.090 0.910 26 H 0.035 0.965 27 H 0.264 0.736 28 H 0.394 0.606 29 H 0.167 0.833 30 H 0.215 0.785 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.081 -5.736 13.251 15.005 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C 0.207 3.793 3 C -0.206 4.206 4 C -0.566 4.566 5 H 0.079 0.921 6 C -0.133 4.133 7 N -0.516 5.516 8 Si 0.730 3.270 9 H -0.206 1.206 10 H -0.211 1.211 11 H -0.199 1.199 12 N -0.335 5.335 13 C 0.367 3.633 14 O -0.401 6.401 15 C -0.092 4.092 16 C -0.153 4.153 17 C -0.169 4.169 18 Cl -0.007 7.007 19 C -0.073 4.073 20 O -0.043 6.043 21 H 0.055 0.945 22 H 0.109 0.891 23 H 0.043 0.957 24 H 0.043 0.957 25 H 0.109 0.891 26 H 0.054 0.946 27 H 0.074 0.926 28 H 0.227 0.773 29 H 0.185 0.815 30 H 0.231 0.769 Dipole moment (debyes) X Y Z Total from point charges 3.589 -5.036 12.973 14.371 hybrid contribution 0.635 -0.917 -0.388 1.181 sum 4.224 -5.953 12.585 14.549 Atomic orbital electron populations 1.22099 0.97018 0.99378 1.02155 1.18284 0.91553 0.89866 0.79617 1.22097 0.98259 0.98129 1.02151 1.21093 1.32830 1.12755 0.89923 0.92066 1.24806 0.94663 0.94889 0.98909 1.69830 1.35729 1.22285 1.23733 0.86426 0.79167 0.79281 0.82106 1.20561 1.21052 1.19872 1.46697 1.50370 1.30672 1.05758 1.16642 0.81385 0.83875 0.81416 1.90821 1.38549 1.25334 1.85371 1.22852 0.99662 0.89688 0.96996 1.21697 1.02206 1.01102 0.90265 1.21048 1.07727 1.01423 0.86658 1.98340 1.97908 1.98311 1.06156 1.24108 1.02158 1.00934 0.80067 1.84219 1.53933 1.38008 1.28111 0.94549 0.89105 0.95730 0.95726 0.89104 0.94556 0.92557 0.77259 0.81511 0.76856 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.68 8.18 37.16 0.30 -3.38 16 2 C 0.29 7.04 0.78 -132.97 -0.10 6.94 16 3 C -0.15 -3.68 8.18 37.16 0.30 -3.37 16 4 C -0.53 -13.50 8.18 -34.44 -0.28 -13.78 16 5 H 0.06 1.51 7.60 -52.48 -0.40 1.11 16 6 C 0.07 1.82 5.15 -17.82 -0.09 1.73 16 7 N -0.88 -23.39 9.35 55.43 0.52 -22.88 16 8 Si 0.90 20.09 29.54 -169.99 -5.02 15.07 16 9 H -0.28 -6.22 7.11 56.52 0.40 -5.81 16 10 H -0.28 -6.35 7.11 56.52 0.40 -5.94 16 11 H -0.27 -6.02 7.11 56.52 0.40 -5.62 16 12 N -0.69 -14.44 5.09 -49.98 -0.25 -14.69 16 13 C 0.58 11.78 7.20 -12.86 -0.09 11.69 16 14 O -0.52 -11.92 13.07 5.19 0.07 -11.85 16 15 C -0.04 -0.64 7.13 -36.79 -0.26 -0.91 16 16 C -0.13 -1.93 10.62 -39.36 -0.42 -2.35 16 17 C -0.14 -1.73 6.71 -39.84 -0.27 -2.00 16 18 Cl -0.04 -0.38 29.32 -51.86 -1.52 -1.90 16 19 C 0.00 -0.02 12.06 29.65 0.36 0.34 16 20 O -0.15 -2.09 10.40 4.88 0.05 -2.04 16 21 H 0.04 0.89 6.16 -51.93 -0.32 0.57 16 22 H 0.09 2.41 6.07 -51.93 -0.32 2.10 16 23 H 0.02 0.58 8.14 -51.93 -0.42 0.16 16 24 H 0.02 0.58 8.14 -51.93 -0.42 0.16 16 25 H 0.09 2.41 6.07 -51.93 -0.32 2.10 16 26 H 0.04 0.89 6.16 -51.93 -0.32 0.57 16 27 H 0.26 6.73 8.31 -40.82 -0.34 6.39 16 28 H 0.39 7.45 8.08 -40.82 -0.33 7.12 16 29 H 0.17 2.36 8.06 -52.49 -0.42 1.94 16 30 H 0.21 1.41 8.06 -52.49 -0.42 0.98 16 LS Contribution 273.12 15.07 4.12 4.12 Total: -1.00 -28.03 273.12 -5.42 -33.45 By element: Atomic # 1 Polarization: 8.63 SS G_CDS: -2.82 Total: 5.80 kcal Atomic # 6 Polarization: -4.53 SS G_CDS: -0.55 Total: -5.08 kcal Atomic # 7 Polarization: -37.83 SS G_CDS: 0.26 Total: -37.57 kcal Atomic # 8 Polarization: -14.01 SS G_CDS: 0.12 Total: -13.89 kcal Atomic # 14 Polarization: 20.09 SS G_CDS: -5.02 Total: 15.07 kcal Atomic # 17 Polarization: -0.38 SS G_CDS: -1.52 Total: -1.90 kcal Total LS contribution 4.12 Total: 4.12 kcal Total: -28.03 -5.42 -33.45 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260320644.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.058 kcal (2) G-P(sol) polarization free energy of solvation -28.034 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.976 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.419 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.454 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.395 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds