Wall clock time and date at job start Mon Mar 30 2020 07:06:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.38263 * 119.97395 * 2 1 4 4 C 1.38187 * 120.05245 * 180.02562 * 3 2 1 5 5 C 1.38448 * 119.98692 * 359.97357 * 4 3 2 6 6 F 1.35105 * 120.02898 * 180.02562 * 5 4 3 7 7 C 1.38540 * 119.94022 * 0.02562 * 5 4 3 8 8 Cl 1.73596 * 120.02788 * 179.97438 * 7 5 4 9 9 C 1.38218 * 119.96605 * 180.22466 * 2 1 3 10 10 C 1.50703 * 119.99811 * 0.02562 * 9 2 1 11 11 H 1.08999 * 109.46323 * 354.40412 * 10 9 2 12 12 C 1.50700 * 109.47039 * 234.40458 * 10 9 2 13 13 H 1.08000 * 119.99609 * 264.88102 * 12 10 9 14 14 C 1.37874 * 119.99979 * 84.87814 * 12 10 9 15 15 N 1.31505 * 120.00325 * 6.16721 * 14 12 10 16 16 Si 1.86804 * 119.99762 * 186.17052 * 14 12 10 17 17 H 1.48497 * 109.47360 * 89.99770 * 16 14 12 18 18 H 1.48500 * 109.46946 * 210.00254 * 16 14 12 19 19 H 1.48508 * 109.46945 * 329.99842 * 16 14 12 20 20 C 1.52997 * 109.47192 * 114.39948 * 10 9 2 21 21 N 1.46904 * 109.47263 * 185.65114 * 20 10 9 22 22 H 1.09004 * 109.46783 * 95.38177 * 1 2 3 23 23 H 1.08999 * 109.47188 * 215.38138 * 1 2 3 24 24 H 1.08999 * 109.47363 * 335.38745 * 1 2 3 25 25 H 1.08005 * 119.96964 * 359.97438 * 3 2 1 26 26 H 1.08002 * 120.00765 * 179.97438 * 4 3 2 27 27 H 0.97004 * 120.00502 * 180.02562 * 15 14 12 28 28 H 1.08999 * 109.47635 * 305.65611 * 20 10 9 29 29 H 1.09009 * 109.46977 * 65.65450 * 20 10 9 30 30 H 1.00900 * 110.99990 * 181.93517 * 21 20 10 31 31 H 1.00900 * 110.99682 * 305.89416 * 21 20 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1978 1.1977 0.0000 4 6 3.5796 1.1996 -0.0005 5 6 4.2732 0.0014 -0.0005 6 9 5.6243 0.0023 -0.0005 7 6 3.5807 -1.1985 -0.0005 8 17 4.4481 -2.7022 -0.0012 9 6 2.1974 -1.1974 -0.0047 10 6 1.4430 -2.5020 -0.0104 11 1 0.3758 -2.3049 0.0902 12 6 1.9071 -3.3556 1.1416 13 1 2.6760 -4.0983 0.9879 14 6 1.3501 -3.1884 2.3917 15 7 0.3322 -2.3719 2.5542 16 14 2.0417 -4.1217 3.8547 17 1 3.1108 -3.3150 4.4960 18 1 0.9572 -4.3765 4.8367 19 1 2.6066 -5.4156 3.3943 20 6 1.7041 -3.2364 -1.3270 21 7 0.8653 -4.4407 -1.3907 22 1 -0.3633 -0.0964 -1.0232 23 1 -0.3633 -0.8379 0.5950 24 1 -0.3634 0.9343 0.4280 25 1 1.6568 2.1325 -0.0004 26 1 4.1185 2.1356 -0.0010 27 1 -0.0595 -2.2539 3.4338 28 1 1.4622 -2.5804 -2.1632 29 1 2.7547 -3.5221 -1.3815 30 1 1.0424 -4.9603 -2.2373 31 1 1.0015 -5.0197 -0.5757 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260365711.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:06:55 Heat of formation + Delta-G solvation = -36.944049 kcal Electronic energy + Delta-G solvation = -17540.817095 eV Core-core repulsion = 14569.008734 eV Total energy + Delta-G solvation = -2971.808361 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 257.068 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -48.36231 -38.93174 -35.70766 -35.05224 -32.32496 -31.68092 -30.66297 -27.54608 -25.74845 -24.37811 -22.41821 -20.86931 -19.70914 -17.00999 -16.82275 -15.49651 -15.16966 -15.13281 -14.85100 -14.42000 -13.85323 -13.51223 -13.17403 -12.97366 -12.58368 -12.15752 -11.75336 -11.65545 -11.46966 -11.29061 -10.98971 -10.88053 -10.60578 -10.40026 -10.13294 -10.04076 -9.44728 -9.09400 -8.44233 -7.91082 -7.72763 -7.60282 -6.11543 -4.10301 1.70110 1.87983 2.95231 3.28454 3.35455 3.38321 4.16817 4.40055 4.75169 5.14158 5.28743 5.53738 5.65208 5.72589 5.91339 6.12550 6.32470 6.36393 6.39799 6.48045 6.58151 6.70685 6.82409 6.96392 7.07815 7.23406 7.49015 7.72412 7.91064 8.12619 8.24406 8.41362 8.94211 9.52114 10.97620 Molecular weight = 257.07amu Principal moments of inertia in cm(-1) A = 0.016893 B = 0.010524 C = 0.009905 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1657.066803 B = 2659.883015 C = 2826.237711 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.080 4.080 3 C -0.100 4.100 4 C -0.172 4.172 5 C 0.083 3.917 6 F -0.143 7.143 7 C -0.058 4.058 8 Cl -0.053 7.053 9 C 0.008 3.992 10 C 0.061 3.939 11 H 0.085 0.915 12 C -0.502 4.502 13 H 0.063 0.937 14 C 0.072 3.928 15 N -0.880 5.880 16 Si 0.885 3.115 17 H -0.281 1.281 18 H -0.287 1.287 19 H -0.274 1.274 20 C 0.070 3.930 21 N -0.844 5.844 22 H 0.057 0.943 23 H 0.109 0.891 24 H 0.051 0.949 25 H 0.124 0.876 26 H 0.128 0.872 27 H 0.262 0.738 28 H 0.039 0.961 29 H 0.025 0.975 30 H 0.318 0.682 31 H 0.350 0.650 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.796 4.029 -5.503 7.372 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.081 4.081 3 C -0.118 4.118 4 C -0.191 4.191 5 C 0.063 3.937 6 F -0.122 7.122 7 C -0.086 4.086 8 Cl -0.024 7.024 9 C 0.006 3.994 10 C 0.042 3.958 11 H 0.103 0.897 12 C -0.539 4.539 13 H 0.081 0.919 14 C -0.131 4.131 15 N -0.517 5.517 16 Si 0.713 3.287 17 H -0.207 1.207 18 H -0.213 1.213 19 H -0.199 1.199 20 C -0.061 4.061 21 N -0.373 5.373 22 H 0.076 0.924 23 H 0.127 0.873 24 H 0.070 0.930 25 H 0.142 0.858 26 H 0.146 0.854 27 H 0.072 0.928 28 H 0.057 0.943 29 H 0.043 0.957 30 H 0.128 0.872 31 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 2.179 4.463 -5.342 7.294 hybrid contribution 1.817 -0.873 1.103 2.298 sum 3.996 3.590 -4.239 6.842 Atomic orbital electron populations 1.20907 0.90559 1.04013 1.01845 1.19826 0.96922 0.91513 0.99818 1.20860 0.92836 0.97970 1.00177 1.20732 0.94895 0.95744 1.07693 1.17446 0.76596 0.93447 1.06252 1.91443 1.29062 1.97388 1.94286 1.20744 0.93136 0.85555 1.09119 1.98300 1.75687 1.31739 1.96625 1.20509 0.90478 0.98193 0.90236 1.18204 0.98360 0.87119 0.92088 0.89689 1.21033 1.21341 1.18660 0.92866 0.91901 1.24913 0.94208 0.95133 0.98871 1.69837 1.21779 1.36837 1.23219 0.86698 0.78813 0.80377 0.82844 1.20709 1.21295 1.19869 1.21894 0.94256 0.92010 0.97937 1.58678 1.61169 1.10759 1.06693 0.92384 0.87267 0.93005 0.85805 0.85393 0.92829 0.94251 0.95671 0.87213 0.83572 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -2.13 9.28 36.01 0.33 -1.80 16 2 C -0.08 -1.58 5.88 -104.62 -0.62 -2.19 16 3 C -0.10 -1.71 9.67 -39.59 -0.38 -2.10 16 4 C -0.17 -2.95 10.03 -39.52 -0.40 -3.34 16 5 C 0.08 1.62 7.28 -39.39 -0.29 1.33 16 6 F -0.14 -2.74 16.84 2.25 0.04 -2.70 16 7 C -0.06 -1.24 6.04 -39.44 -0.24 -1.48 16 8 Cl -0.05 -1.09 22.90 -51.86 -1.19 -2.28 16 9 C 0.01 0.17 4.78 -104.59 -0.50 -0.33 16 10 C 0.06 1.38 1.87 -92.92 -0.17 1.21 16 11 H 0.09 2.10 4.92 -51.93 -0.26 1.85 16 12 C -0.50 -12.42 5.55 -34.44 -0.19 -12.61 16 13 H 0.06 1.57 6.58 -52.49 -0.35 1.22 16 14 C 0.07 1.87 5.45 -17.82 -0.10 1.77 16 15 N -0.88 -23.24 12.22 55.43 0.68 -22.56 16 16 Si 0.88 20.79 29.54 -169.99 -5.02 15.77 16 17 H -0.28 -6.77 7.11 56.52 0.40 -6.37 16 18 H -0.29 -6.73 7.11 56.52 0.40 -6.33 16 19 H -0.27 -6.36 7.11 56.52 0.40 -5.96 16 20 C 0.07 1.41 5.99 -3.82 -0.02 1.39 16 21 N -0.84 -15.90 9.64 -10.37 -0.10 -16.00 16 22 H 0.06 0.95 8.14 -51.93 -0.42 0.53 16 23 H 0.11 2.34 5.61 -51.93 -0.29 2.05 16 24 H 0.05 0.82 8.05 -51.93 -0.42 0.41 16 25 H 0.12 1.72 8.06 -52.48 -0.42 1.29 16 26 H 0.13 1.81 8.06 -52.49 -0.42 1.38 16 27 H 0.26 6.74 8.31 -40.82 -0.34 6.40 16 28 H 0.04 0.77 8.14 -51.93 -0.42 0.35 16 29 H 0.03 0.51 5.68 -51.92 -0.30 0.21 16 30 H 0.32 5.01 9.08 -39.29 -0.36 4.65 16 31 H 0.35 6.92 8.05 -39.29 -0.32 6.60 16 LS Contribution 272.96 15.07 4.11 4.11 Total: -1.00 -26.35 272.96 -7.15 -33.50 By element: Atomic # 1 Polarization: 11.40 SS G_CDS: -3.10 Total: 8.29 kcal Atomic # 6 Polarization: -15.57 SS G_CDS: -2.57 Total: -18.14 kcal Atomic # 7 Polarization: -39.14 SS G_CDS: 0.58 Total: -38.56 kcal Atomic # 9 Polarization: -2.74 SS G_CDS: 0.04 Total: -2.70 kcal Atomic # 14 Polarization: 20.79 SS G_CDS: -5.02 Total: 15.77 kcal Atomic # 17 Polarization: -1.09 SS G_CDS: -1.19 Total: -2.28 kcal Total LS contribution 4.11 Total: 4.11 kcal Total: -26.35 -7.15 -33.50 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260365711.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -3.442 kcal (2) G-P(sol) polarization free energy of solvation -26.348 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.790 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.154 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.502 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.944 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds