Wall clock time and date at job start Mon Mar 30 2020 07:07:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.38237 * 119.97810 * 2 1 4 4 C 1.38404 * 119.98761 * 180.25257 * 3 2 1 5 5 F 1.35100 * 120.03029 * 179.75136 * 4 3 2 6 6 C 1.38588 * 119.93726 * 359.47769 * 4 3 2 7 7 Cl 1.73606 * 120.02537 * 180.22690 * 6 4 3 8 8 C 1.38283 * 119.95292 * 0.25166 * 6 4 3 9 9 C 1.38219 * 119.97467 * 179.72995 * 2 1 3 10 10 C 1.50700 * 119.96905 * 0.04453 * 9 2 1 11 11 H 1.09000 * 109.47355 * 354.08714 * 10 9 2 12 12 C 1.50701 * 109.47275 * 114.08984 * 10 9 2 13 13 H 1.07997 * 120.00160 * 0.02562 * 12 10 9 14 14 C 1.37881 * 119.99872 * 180.02562 * 12 10 9 15 15 N 1.31513 * 119.99884 * 359.97438 * 14 12 10 16 16 Si 1.86800 * 119.99755 * 180.02562 * 14 12 10 17 17 H 1.48497 * 109.47167 * 359.97438 * 16 14 12 18 18 H 1.48500 * 109.47139 * 120.00073 * 16 14 12 19 19 H 1.48506 * 109.47031 * 239.99694 * 16 14 12 20 20 C 1.53003 * 109.47095 * 234.09050 * 10 9 2 21 21 N 1.46899 * 109.47309 * 64.99751 * 20 10 9 22 22 H 1.08999 * 109.46852 * 264.81319 * 1 2 3 23 23 H 1.08999 * 109.47129 * 24.80777 * 1 2 3 24 24 H 1.08996 * 109.47427 * 144.81057 * 1 2 3 25 25 H 1.08000 * 120.00772 * 359.97438 * 3 2 1 26 26 H 1.07994 * 119.99532 * 179.97438 * 8 6 4 27 27 H 0.97006 * 119.99762 * 179.97438 * 15 14 12 28 28 H 1.09001 * 109.46927 * 185.00092 * 20 10 9 29 29 H 1.09001 * 109.47305 * 304.99612 * 20 10 9 30 30 H 1.00909 * 110.99820 * 56.04311 * 21 20 10 31 31 H 1.00892 * 111.00090 * 180.02562 * 21 20 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1977 1.1974 0.0000 4 6 3.5817 1.1977 -0.0053 5 9 4.2576 2.3674 -0.0104 6 6 4.2736 -0.0032 0.0004 7 17 6.0096 -0.0055 -0.0003 8 6 3.5801 -1.1995 0.0060 9 6 2.1975 -1.1973 0.0056 10 6 1.4427 -2.5017 0.0108 11 1 0.3759 -2.3038 0.1151 12 6 1.6940 -3.2325 -1.2830 13 1 2.3363 -2.7964 -2.0337 14 6 1.1037 -4.4581 -1.5082 15 7 0.3219 -4.9894 -0.5939 16 14 1.4157 -5.3644 -3.1116 17 1 2.3249 -4.5594 -3.9664 18 1 2.0420 -6.6796 -2.8231 19 1 0.1276 -5.5744 -3.8202 20 6 1.9188 -3.3618 1.1832 21 7 1.5661 -2.7037 2.4483 22 1 -0.3633 -0.0929 1.0235 23 1 -0.3633 0.9328 -0.4312 24 1 -0.3634 -0.8398 -0.5922 25 1 1.6575 2.1326 -0.0004 26 1 4.1185 -2.1356 0.0100 27 1 -0.0936 -5.8515 -0.7525 28 1 1.4382 -4.3389 1.1356 29 1 3.0003 -3.4857 1.1273 30 1 0.5752 -2.5191 2.4959 31 1 1.8705 -3.2523 3.2384 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261090381.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:07:04 Heat of formation + Delta-G solvation = -43.468216 kcal Electronic energy + Delta-G solvation = -17058.916045 eV Core-core repulsion = 14086.824775 eV Total energy + Delta-G solvation = -2972.091270 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 257.068 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -48.48378 -39.08278 -36.27537 -35.01487 -32.26082 -32.06390 -30.70729 -27.58491 -26.18180 -23.98563 -22.74759 -21.09356 -19.62631 -16.95481 -16.76469 -16.03247 -15.51166 -15.29432 -14.71903 -14.30376 -13.61802 -13.50209 -13.18815 -13.10188 -12.86450 -12.27173 -12.24250 -12.04920 -11.55501 -11.32130 -11.08376 -10.91036 -10.77569 -10.54373 -10.47445 -9.95913 -9.70291 -9.35029 -8.58746 -8.29527 -7.77880 -7.61780 -6.18382 -4.26654 1.57894 1.74694 2.46389 3.19579 3.28974 3.33846 4.07331 4.32257 4.59473 5.08323 5.11949 5.45181 5.64361 5.67258 5.73742 5.97785 6.08613 6.14732 6.43484 6.49232 6.56287 6.69936 6.76267 6.91222 7.09047 7.34351 7.43894 7.70118 7.80923 7.95534 8.24374 8.31779 8.78247 9.39219 10.85086 Molecular weight = 257.07amu Principal moments of inertia in cm(-1) A = 0.020833 B = 0.007243 C = 0.006597 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1343.710728 B = 3865.088250 C = 4243.351340 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.062 4.062 3 C -0.147 4.147 4 C 0.076 3.924 5 F -0.142 7.142 6 C -0.075 4.075 7 Cl -0.076 7.076 8 C -0.071 4.071 9 C -0.007 4.007 10 C 0.078 3.922 11 H 0.048 0.952 12 C -0.512 4.512 13 H 0.061 0.939 14 C 0.065 3.935 15 N -0.889 5.889 16 Si 0.894 3.106 17 H -0.271 1.271 18 H -0.283 1.283 19 H -0.283 1.283 20 C 0.061 3.939 21 N -0.858 5.858 22 H 0.070 0.930 23 H 0.056 0.944 24 H 0.085 0.915 25 H 0.131 0.869 26 H 0.138 0.862 27 H 0.262 0.738 28 H 0.069 0.931 29 H 0.044 0.956 30 H 0.329 0.671 31 H 0.321 0.679 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.174 7.198 2.754 8.008 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.062 4.062 3 C -0.166 4.166 4 C 0.056 3.944 5 F -0.121 7.121 6 C -0.102 4.102 7 Cl -0.047 7.047 8 C -0.090 4.090 9 C -0.007 4.007 10 C 0.060 3.940 11 H 0.066 0.934 12 C -0.550 4.550 13 H 0.079 0.921 14 C -0.137 4.137 15 N -0.527 5.527 16 Si 0.721 3.279 17 H -0.196 1.196 18 H -0.209 1.209 19 H -0.209 1.209 20 C -0.069 4.069 21 N -0.385 5.385 22 H 0.089 0.911 23 H 0.075 0.925 24 H 0.103 0.897 25 H 0.149 0.851 26 H 0.155 0.845 27 H 0.072 0.928 28 H 0.087 0.913 29 H 0.063 0.937 30 H 0.140 0.860 31 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges 2.735 7.669 2.512 8.521 hybrid contribution -0.027 -1.203 -0.662 1.373 sum 2.708 6.466 1.850 7.250 Atomic orbital electron populations 1.20818 0.90730 1.02731 1.02590 1.19712 0.96575 0.91578 0.98321 1.20813 0.91062 0.99257 1.05459 1.17194 0.89874 0.79806 1.07555 1.91450 1.80349 1.45871 1.94420 1.20931 0.84232 0.94278 1.10782 1.98327 1.10226 1.98950 1.97240 1.20818 0.94308 0.95590 0.98285 1.20319 0.92411 0.96567 0.91419 1.18010 0.95261 0.86658 0.94091 0.93413 1.21127 1.29614 1.03465 1.00803 0.92077 1.24956 0.94678 0.97240 0.96828 1.69863 1.31137 1.18143 1.33592 0.86494 0.78193 0.79670 0.83521 1.19551 1.20924 1.20908 1.22077 0.98732 0.98863 0.87214 1.59018 1.21065 1.53461 1.04964 0.91139 0.92466 0.89668 0.85065 0.84459 0.92807 0.91272 0.93727 0.86015 0.86922 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.75 9.14 36.00 0.33 -1.42 16 2 C -0.06 -1.11 5.88 -104.63 -0.62 -1.72 16 3 C -0.15 -2.46 9.66 -39.52 -0.38 -2.84 16 4 C 0.08 1.35 7.28 -39.39 -0.29 1.06 16 5 F -0.14 -2.47 16.84 2.25 0.04 -2.43 16 6 C -0.07 -1.38 6.33 -39.44 -0.25 -1.63 16 7 Cl -0.08 -1.27 28.62 -51.86 -1.48 -2.76 16 8 C -0.07 -1.40 8.66 -39.56 -0.34 -1.75 16 9 C -0.01 -0.13 4.46 -104.62 -0.47 -0.60 16 10 C 0.08 1.74 1.82 -92.92 -0.17 1.57 16 11 H 0.05 1.11 5.71 -51.93 -0.30 0.81 16 12 C -0.51 -12.77 8.32 -34.44 -0.29 -13.05 16 13 H 0.06 1.56 7.73 -52.49 -0.41 1.15 16 14 C 0.06 1.64 5.29 -17.82 -0.09 1.55 16 15 N -0.89 -23.07 11.29 55.43 0.63 -22.45 16 16 Si 0.89 20.07 29.54 -169.99 -5.02 15.04 16 17 H -0.27 -6.10 7.11 56.52 0.40 -5.70 16 18 H -0.28 -6.37 7.11 56.52 0.40 -5.97 16 19 H -0.28 -6.36 7.11 56.52 0.40 -5.96 16 20 C 0.06 1.31 5.86 -3.82 -0.02 1.28 16 21 N -0.86 -15.57 9.34 -10.37 -0.10 -15.66 16 22 H 0.07 1.02 8.14 -51.93 -0.42 0.60 16 23 H 0.06 0.75 8.05 -51.93 -0.42 0.33 16 24 H 0.08 1.48 6.53 -51.93 -0.34 1.14 16 25 H 0.13 1.83 8.06 -52.49 -0.42 1.41 16 26 H 0.14 2.73 7.19 -52.49 -0.38 2.35 16 27 H 0.26 6.56 8.31 -40.82 -0.34 6.22 16 28 H 0.07 1.66 5.95 -51.93 -0.31 1.35 16 29 H 0.04 0.97 6.90 -51.93 -0.36 0.61 16 30 H 0.33 5.74 8.99 -39.29 -0.35 5.39 16 31 H 0.32 5.18 9.08 -39.30 -0.36 4.82 16 LS Contribution 280.28 15.07 4.22 4.22 Total: -1.00 -25.50 280.28 -7.49 -33.00 By element: Atomic # 1 Polarization: 11.77 SS G_CDS: -3.19 Total: 8.57 kcal Atomic # 6 Polarization: -14.96 SS G_CDS: -2.58 Total: -17.54 kcal Atomic # 7 Polarization: -38.64 SS G_CDS: 0.53 Total: -38.11 kcal Atomic # 9 Polarization: -2.47 SS G_CDS: 0.04 Total: -2.43 kcal Atomic # 14 Polarization: 20.07 SS G_CDS: -5.02 Total: 15.04 kcal Atomic # 17 Polarization: -1.27 SS G_CDS: -1.48 Total: -2.76 kcal Total LS contribution 4.22 Total: 4.22 kcal Total: -25.50 -7.49 -33.00 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261090381.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.471 kcal (2) G-P(sol) polarization free energy of solvation -25.504 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.975 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.493 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.997 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.468 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds