Wall clock time and date at job start Mon Mar 30 2020 07:06:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.38237 * 119.97739 * 2 1 4 4 C 1.38403 * 119.98800 * 180.25311 * 3 2 1 5 5 F 1.35104 * 120.02975 * 179.78785 * 4 3 2 6 6 C 1.38580 * 119.93815 * 359.51658 * 4 3 2 7 7 Cl 1.73603 * 120.02853 * 180.22884 * 6 4 3 8 8 C 1.38287 * 119.95429 * 0.24775 * 6 4 3 9 9 C 1.38222 * 119.97260 * 179.76384 * 2 1 3 10 10 C 1.50697 * 119.97166 * 0.02562 * 9 2 1 11 11 H 1.08996 * 109.47342 * 324.97571 * 10 9 2 12 12 N 1.46894 * 109.47012 * 204.97499 * 10 9 2 13 13 C 1.53001 * 109.47125 * 84.97340 * 10 9 2 14 14 C 1.50698 * 109.46849 * 184.99985 * 13 10 9 15 15 H 1.08001 * 120.00464 * 0.02562 * 14 13 10 16 16 C 1.37888 * 119.99898 * 180.02562 * 14 13 10 17 17 N 1.31516 * 119.99578 * 0.02562 * 16 14 13 18 18 Si 1.86795 * 120.00044 * 179.97438 * 16 14 13 19 19 H 1.48497 * 109.47073 * 60.00006 * 18 16 14 20 20 H 1.48500 * 109.47155 * 179.97438 * 18 16 14 21 21 H 1.48503 * 109.47055 * 300.00152 * 18 16 14 22 22 H 1.09004 * 109.46807 * 270.23476 * 1 2 3 23 23 H 1.09003 * 109.47281 * 30.23169 * 1 2 3 24 24 H 1.09003 * 109.47285 * 150.23417 * 1 2 3 25 25 H 1.08007 * 120.00585 * 0.02562 * 3 2 1 26 26 H 1.07993 * 119.99555 * 179.97438 * 8 6 4 27 27 H 1.00906 * 110.99836 * 176.04785 * 12 10 9 28 28 H 1.00901 * 111.00413 * 300.00034 * 12 10 9 29 29 H 1.08995 * 109.47268 * 305.00035 * 13 10 9 30 30 H 1.09000 * 109.47413 * 65.00319 * 13 10 9 31 31 H 0.96997 * 119.99162 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1977 1.1974 0.0000 4 6 3.5817 1.1977 -0.0053 5 9 4.2576 2.3675 -0.0096 6 6 4.2736 -0.0030 -0.0005 7 17 6.0096 -0.0054 -0.0011 8 6 3.5802 -1.1995 0.0045 9 6 2.1975 -1.1974 0.0049 10 6 1.4428 -2.5017 0.0097 11 1 0.5322 -2.3924 0.5987 12 7 2.2840 -3.5520 0.5989 13 6 1.0785 -2.8854 -1.4259 14 6 0.2194 -4.1235 -1.4123 15 1 -0.0411 -4.5897 -0.4736 16 6 -0.2341 -4.6610 -2.5983 17 7 0.0836 -4.0935 -3.7414 18 14 -1.2984 -6.1960 -2.5815 19 1 -2.5394 -5.9295 -1.8108 20 1 -1.6521 -6.5684 -3.9749 21 1 -0.5503 -7.3101 -1.9455 22 1 -0.3633 0.0042 1.0277 23 1 -0.3634 0.8879 -0.5174 24 1 -0.3634 -0.8921 -0.5102 25 1 1.6574 2.1326 0.0004 26 1 4.1186 -2.1356 0.0078 27 1 1.7778 -4.4218 0.6726 28 1 3.1350 -3.6726 0.0705 29 1 0.5297 -2.0674 -1.8925 30 1 1.9892 -3.0814 -1.9919 31 1 -0.2351 -4.4719 -4.5757 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261104575.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:06:50 Heat of formation + Delta-G solvation = -46.393569 kcal Electronic energy + Delta-G solvation = -16704.716075 eV Core-core repulsion = 13732.497951 eV Total energy + Delta-G solvation = -2972.218123 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 257.068 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -48.78100 -39.52925 -36.58094 -35.33558 -32.58674 -32.41930 -29.83985 -28.08846 -26.77226 -24.68094 -22.51833 -21.51503 -19.85190 -17.39703 -16.88513 -16.52061 -15.60418 -15.51665 -14.72690 -14.67294 -14.10793 -13.54743 -13.44846 -13.05678 -12.76736 -12.67228 -12.45599 -12.20782 -12.03978 -11.31748 -11.26895 -11.05500 -10.85496 -10.78199 -10.62702 -10.37416 -10.00216 -9.27875 -8.68606 -8.54795 -8.30660 -7.78043 -6.15889 -4.21451 1.17966 1.32751 2.16320 3.23193 3.29209 3.30379 3.64076 4.24977 4.32221 4.76920 4.97721 5.14444 5.21215 5.28934 5.60077 5.70312 5.74369 5.88829 6.01028 6.09360 6.18607 6.33895 6.42185 6.58316 6.81488 6.94075 7.33916 7.47571 7.76471 7.91078 8.09407 8.20986 8.84825 9.44474 10.94454 Molecular weight = 257.07amu Principal moments of inertia in cm(-1) A = 0.030117 B = 0.005354 C = 0.004981 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 929.474988 B = 5228.479754 C = 5619.550286 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.125 4.125 2 C -0.048 4.048 3 C -0.145 4.145 4 C 0.092 3.908 5 F -0.136 7.136 6 C -0.077 4.077 7 Cl -0.065 7.065 8 C -0.069 4.069 9 C -0.049 4.049 10 C 0.125 3.875 11 H 0.086 0.914 12 N -0.841 5.841 13 C 0.001 3.999 14 C -0.530 4.530 15 H 0.057 0.943 16 C 0.062 3.938 17 N -0.889 5.889 18 Si 0.893 3.107 19 H -0.276 1.276 20 H -0.287 1.287 21 H -0.276 1.276 22 H 0.073 0.927 23 H 0.066 0.934 24 H 0.091 0.909 25 H 0.139 0.861 26 H 0.143 0.857 27 H 0.350 0.650 28 H 0.329 0.671 29 H 0.024 0.976 30 H 0.018 0.982 31 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.814 8.083 7.252 11.879 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C -0.049 4.049 3 C -0.164 4.164 4 C 0.072 3.928 5 F -0.114 7.114 6 C -0.104 4.104 7 Cl -0.036 7.036 8 C -0.088 4.088 9 C -0.050 4.050 10 C 0.014 3.986 11 H 0.104 0.896 12 N -0.371 5.371 13 C -0.038 4.038 14 C -0.568 4.568 15 H 0.075 0.925 16 C -0.141 4.141 17 N -0.527 5.527 18 Si 0.721 3.279 19 H -0.201 1.201 20 H -0.213 1.213 21 H -0.202 1.202 22 H 0.092 0.908 23 H 0.085 0.915 24 H 0.110 0.890 25 H 0.157 0.843 26 H 0.161 0.839 27 H 0.164 0.836 28 H 0.141 0.859 29 H 0.042 0.958 30 H 0.036 0.964 31 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 4.991 8.577 7.704 12.562 hybrid contribution -0.342 -1.059 -1.161 1.609 sum 4.649 7.517 6.542 10.997 Atomic orbital electron populations 1.20974 0.89997 1.04442 1.02682 1.19698 0.96977 0.91294 0.96945 1.20891 0.91102 0.99507 1.04903 1.17279 0.89911 0.80023 1.05596 1.91489 1.80233 1.45600 1.94103 1.20909 0.85002 0.94094 1.10435 1.98352 1.09197 1.98919 1.97129 1.20775 0.93878 0.96138 0.98033 1.20123 0.92670 0.95924 0.96308 1.20582 0.93743 0.86290 0.98023 0.89611 1.59301 1.09236 1.12019 1.56514 1.19815 0.97216 0.97029 0.89712 1.21082 1.32135 1.10974 0.92573 0.92457 1.25012 0.96181 0.97296 0.95580 1.69956 1.45028 1.40193 0.97546 0.86636 0.80893 0.83269 0.77093 1.20145 1.21285 1.20158 0.90817 0.91467 0.88987 0.84289 0.83946 0.83635 0.85877 0.95767 0.96365 0.92732 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.72 9.21 36.01 0.33 -1.39 16 2 C -0.05 -0.75 5.88 -104.63 -0.62 -1.37 16 3 C -0.15 -2.08 9.68 -39.52 -0.38 -2.46 16 4 C 0.09 1.42 7.28 -39.39 -0.29 1.13 16 5 F -0.14 -2.06 16.84 2.25 0.04 -2.02 16 6 C -0.08 -1.21 6.33 -39.44 -0.25 -1.46 16 7 Cl -0.06 -0.93 28.62 -51.86 -1.48 -2.42 16 8 C -0.07 -1.13 9.05 -39.55 -0.36 -1.49 16 9 C -0.05 -0.84 5.06 -104.62 -0.53 -1.37 16 10 C 0.12 2.33 2.29 -68.87 -0.16 2.17 16 11 H 0.09 1.60 6.99 -51.93 -0.36 1.24 16 12 N -0.84 -14.53 8.79 -5.66 -0.05 -14.58 16 13 C 0.00 0.01 4.35 -27.88 -0.12 -0.11 16 14 C -0.53 -13.45 8.55 -34.44 -0.29 -13.74 16 15 H 0.06 1.40 7.15 -52.49 -0.38 1.02 16 16 C 0.06 1.65 5.46 -17.81 -0.10 1.55 16 17 N -0.89 -25.27 13.29 55.43 0.74 -24.53 16 18 Si 0.89 20.39 29.54 -169.99 -5.02 15.37 16 19 H -0.28 -6.20 7.11 56.52 0.40 -5.80 16 20 H -0.29 -6.60 7.11 56.52 0.40 -6.19 16 21 H -0.28 -6.20 7.11 56.52 0.40 -5.79 16 22 H 0.07 0.89 8.14 -51.93 -0.42 0.46 16 23 H 0.07 0.80 8.09 -51.93 -0.42 0.38 16 24 H 0.09 1.49 5.48 -51.93 -0.28 1.20 16 25 H 0.14 1.63 8.06 -52.48 -0.42 1.21 16 26 H 0.14 2.20 6.29 -52.49 -0.33 1.87 16 27 H 0.35 6.16 7.90 -39.29 -0.31 5.85 16 28 H 0.33 5.46 7.21 -39.29 -0.28 5.18 16 29 H 0.02 0.60 7.02 -51.93 -0.36 0.24 16 30 H 0.02 0.46 8.14 -51.93 -0.42 0.04 16 31 H 0.26 7.14 8.31 -40.82 -0.34 6.80 16 LS Contribution 280.30 15.07 4.22 4.22 Total: -1.00 -27.36 280.30 -7.45 -34.81 By element: Atomic # 1 Polarization: 10.82 SS G_CDS: -3.13 Total: 7.69 kcal Atomic # 6 Polarization: -15.77 SS G_CDS: -2.76 Total: -18.53 kcal Atomic # 7 Polarization: -39.79 SS G_CDS: 0.69 Total: -39.11 kcal Atomic # 9 Polarization: -2.06 SS G_CDS: 0.04 Total: -2.02 kcal Atomic # 14 Polarization: 20.39 SS G_CDS: -5.02 Total: 15.37 kcal Atomic # 17 Polarization: -0.93 SS G_CDS: -1.48 Total: -2.42 kcal Total LS contribution 4.22 Total: 4.22 kcal Total: -27.36 -7.45 -34.81 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261104575.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.588 kcal (2) G-P(sol) polarization free energy of solvation -27.356 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.944 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.450 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.806 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.394 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds