Wall clock time and date at job start Mon Mar 30 2020 07:06:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.38237 * 119.97761 * 2 1 4 4 C 1.38403 * 119.98811 * 180.23557 * 3 2 1 5 5 F 1.35104 * 120.02975 * 179.74000 * 4 3 2 6 6 C 1.38580 * 119.93815 * 359.46873 * 4 3 2 7 7 Cl 1.73597 * 120.02692 * 180.30130 * 6 4 3 8 8 C 1.38288 * 119.95406 * 0.27644 * 6 4 3 9 9 C 1.38222 * 119.97238 * 179.72717 * 2 1 3 10 10 C 1.50697 * 119.97172 * 0.02562 * 9 2 1 11 11 H 1.09002 * 109.46959 * 40.02527 * 10 9 2 12 12 N 1.46904 * 109.47010 * 160.02791 * 10 9 2 13 13 C 1.52999 * 109.47125 * 280.02750 * 10 9 2 14 14 C 1.50702 * 109.46988 * 174.99923 * 13 10 9 15 15 H 1.08007 * 119.99963 * 0.02562 * 14 13 10 16 16 C 1.37872 * 120.00246 * 179.97438 * 14 13 10 17 17 N 1.31512 * 120.00638 * 179.97438 * 16 14 13 18 18 Si 1.86810 * 119.99791 * 0.02562 * 16 14 13 19 19 H 1.48499 * 109.47068 * 89.99526 * 18 16 14 20 20 H 1.48496 * 109.46967 * 209.99443 * 18 16 14 21 21 H 1.48499 * 109.47022 * 329.99510 * 18 16 14 22 22 H 1.09006 * 109.47096 * 270.27834 * 1 2 3 23 23 H 1.08996 * 109.47127 * 30.27708 * 1 2 3 24 24 H 1.08997 * 109.47347 * 150.27621 * 1 2 3 25 25 H 1.08007 * 120.00605 * 0.02562 * 3 2 1 26 26 H 1.07993 * 119.99506 * 180.02562 * 8 6 4 27 27 H 1.00892 * 111.00036 * 60.00147 * 12 10 9 28 28 H 1.00902 * 110.99710 * 183.96067 * 12 10 9 29 29 H 1.09004 * 109.46929 * 294.99751 * 13 10 9 30 30 H 1.08999 * 109.47398 * 55.00157 * 13 10 9 31 31 H 0.96995 * 120.00765 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1977 1.1974 0.0000 4 6 3.5817 1.1977 -0.0049 5 9 4.2576 2.3675 -0.0102 6 6 4.2736 -0.0030 0.0013 7 17 6.0096 -0.0053 0.0030 8 6 3.5802 -1.1995 0.0066 9 6 2.1975 -1.1974 0.0057 10 6 1.4428 -2.5017 0.0113 11 1 0.5799 -2.4250 -0.6503 12 7 2.3244 -3.5796 -0.4565 13 6 0.9694 -2.8109 1.4330 14 6 0.1113 -4.0497 1.4185 15 1 -0.0771 -4.5652 0.4883 16 6 -0.4322 -4.5256 2.5927 17 7 -1.1815 -5.6064 2.5801 18 14 -0.1057 -3.6344 4.2018 19 1 -1.1566 -2.6085 4.4215 20 1 -0.1249 -4.6103 5.3208 21 1 1.2240 -2.9760 4.1419 22 1 -0.3633 0.0050 1.0277 23 1 -0.3633 0.8875 -0.5181 24 1 -0.3634 -0.8924 -0.5095 25 1 1.6574 2.1327 0.0004 26 1 4.1186 -2.1355 0.0119 27 1 3.1324 -3.6708 0.1408 28 1 1.8236 -4.4530 -0.5233 29 1 1.8340 -2.9753 2.0761 30 1 0.3882 -1.9708 1.8132 31 1 -1.5636 -5.9415 3.4062 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261104576.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:06:53 Heat of formation + Delta-G solvation = -41.758060 kcal Electronic energy + Delta-G solvation = -16782.090325 eV Core-core repulsion = 13810.073212 eV Total energy + Delta-G solvation = -2972.017113 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 257.068 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -48.87424 -39.65075 -36.67668 -35.45072 -32.59406 -32.49301 -29.94890 -28.69634 -26.87217 -24.72920 -22.34857 -21.51784 -19.88289 -17.57764 -17.09647 -16.73020 -15.71199 -15.65347 -14.86227 -14.41885 -14.20891 -13.57779 -13.55043 -13.17980 -13.12735 -12.80400 -12.63355 -12.27221 -12.19157 -11.63271 -11.34757 -11.14757 -10.91136 -10.84855 -10.61684 -10.32950 -9.87226 -9.36132 -8.78060 -8.70682 -8.42142 -7.92794 -6.20451 -4.21008 1.07278 1.21575 2.07343 3.19181 3.28494 3.31291 3.53454 4.14973 4.30914 4.67325 4.85592 5.03679 5.14290 5.17473 5.45681 5.60325 5.64802 5.81488 5.94560 5.99322 6.08962 6.20201 6.25305 6.37490 6.68628 6.83162 6.92473 7.11399 7.57233 7.78222 8.05999 8.32416 8.81491 9.41363 10.91947 Molecular weight = 257.07amu Principal moments of inertia in cm(-1) A = 0.025996 B = 0.005945 C = 0.005678 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1076.850062 B = 4709.014397 C = 4929.903811 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 C -0.049 4.049 3 C -0.145 4.145 4 C 0.094 3.906 5 F -0.135 7.135 6 C -0.079 4.079 7 Cl -0.063 7.063 8 C -0.068 4.068 9 C -0.056 4.056 10 C 0.136 3.864 11 H 0.093 0.907 12 N -0.841 5.841 13 C -0.037 4.037 14 C -0.527 4.527 15 H 0.075 0.925 16 C 0.073 3.927 17 N -0.896 5.896 18 Si 0.876 3.124 19 H -0.276 1.276 20 H -0.287 1.287 21 H -0.266 1.266 22 H 0.080 0.920 23 H 0.065 0.935 24 H 0.083 0.917 25 H 0.140 0.860 26 H 0.146 0.854 27 H 0.329 0.671 28 H 0.355 0.645 29 H 0.017 0.983 30 H 0.019 0.981 31 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.826 11.842 -4.722 14.960 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C -0.050 4.050 3 C -0.164 4.164 4 C 0.074 3.926 5 F -0.113 7.113 6 C -0.106 4.106 7 Cl -0.034 7.034 8 C -0.087 4.087 9 C -0.057 4.057 10 C 0.025 3.975 11 H 0.110 0.890 12 N -0.371 5.371 13 C -0.076 4.076 14 C -0.565 4.565 15 H 0.093 0.907 16 C -0.130 4.130 17 N -0.534 5.534 18 Si 0.703 3.297 19 H -0.202 1.202 20 H -0.213 1.213 21 H -0.191 1.191 22 H 0.099 0.901 23 H 0.084 0.916 24 H 0.102 0.898 25 H 0.158 0.842 26 H 0.164 0.836 27 H 0.141 0.859 28 H 0.170 0.830 29 H 0.035 0.965 30 H 0.037 0.963 31 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges 7.968 12.182 -5.282 15.485 hybrid contribution 0.223 0.186 1.981 2.002 sum 8.192 12.368 -3.301 15.198 Atomic orbital electron populations 1.20937 0.89844 1.03440 1.03449 1.19715 0.97029 0.91312 0.96932 1.20898 0.91109 0.99527 1.04882 1.17298 0.89919 0.80063 1.05332 1.91496 1.80215 1.45565 1.94055 1.20934 0.85143 0.94094 1.10434 1.98357 1.09037 1.98914 1.97112 1.20826 0.93854 0.96264 0.97786 1.20140 0.92744 0.95911 0.96951 1.20362 0.93395 0.86127 0.97665 0.88972 1.59284 1.11284 1.10545 1.55944 1.20309 0.97000 0.97856 0.92427 1.20997 1.30389 1.09262 0.95829 0.90659 1.24976 0.94389 0.94607 0.98989 1.69892 1.33171 1.22430 1.27923 0.86843 0.79391 0.79808 0.83649 1.20171 1.21285 1.19098 0.90109 0.91577 0.89821 0.84190 0.83647 0.85920 0.83007 0.96485 0.96264 0.92534 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.56 8.92 36.01 0.32 -1.24 16 2 C -0.05 -0.71 5.87 -104.63 -0.61 -1.33 16 3 C -0.15 -1.95 9.68 -39.52 -0.38 -2.33 16 4 C 0.09 1.36 7.28 -39.39 -0.29 1.08 16 5 F -0.13 -1.95 16.84 2.25 0.04 -1.91 16 6 C -0.08 -1.17 6.33 -39.44 -0.25 -1.42 16 7 Cl -0.06 -0.86 28.62 -51.86 -1.48 -2.34 16 8 C -0.07 -1.05 9.03 -39.55 -0.36 -1.40 16 9 C -0.06 -0.91 5.09 -104.62 -0.53 -1.44 16 10 C 0.14 2.42 2.43 -68.86 -0.17 2.26 16 11 H 0.09 1.67 6.41 -51.93 -0.33 1.34 16 12 N -0.84 -14.18 8.67 -5.65 -0.05 -14.22 16 13 C -0.04 -0.80 3.61 -27.88 -0.10 -0.90 16 14 C -0.53 -13.51 9.10 -34.44 -0.31 -13.82 16 15 H 0.08 2.06 7.39 -52.48 -0.39 1.67 16 16 C 0.07 1.98 5.47 -17.82 -0.10 1.89 16 17 N -0.90 -26.08 13.96 55.43 0.77 -25.30 16 18 Si 0.88 20.71 27.47 -169.99 -4.67 16.04 16 19 H -0.28 -6.43 7.11 56.52 0.40 -6.03 16 20 H -0.29 -6.81 7.11 56.52 0.40 -6.41 16 21 H -0.27 -6.14 6.54 56.52 0.37 -5.77 16 22 H 0.08 1.08 7.76 -51.93 -0.40 0.68 16 23 H 0.07 0.68 8.09 -51.93 -0.42 0.26 16 24 H 0.08 1.15 6.12 -51.93 -0.32 0.83 16 25 H 0.14 1.52 8.06 -52.48 -0.42 1.10 16 26 H 0.15 2.10 6.24 -52.49 -0.33 1.77 16 27 H 0.33 5.21 7.29 -39.30 -0.29 4.93 16 28 H 0.36 6.35 7.90 -39.29 -0.31 6.04 16 29 H 0.02 0.38 7.20 -51.93 -0.37 0.00 16 30 H 0.02 0.41 6.50 -51.93 -0.34 0.07 16 31 H 0.26 7.28 8.31 -40.82 -0.34 6.94 16 LS Contribution 276.37 15.07 4.16 4.16 Total: -1.00 -27.71 276.37 -7.09 -34.80 By element: Atomic # 1 Polarization: 10.51 SS G_CDS: -3.09 Total: 7.43 kcal Atomic # 6 Polarization: -15.88 SS G_CDS: -2.78 Total: -18.66 kcal Atomic # 7 Polarization: -40.25 SS G_CDS: 0.72 Total: -39.53 kcal Atomic # 9 Polarization: -1.95 SS G_CDS: 0.04 Total: -1.91 kcal Atomic # 14 Polarization: 20.71 SS G_CDS: -4.67 Total: 16.04 kcal Atomic # 17 Polarization: -0.86 SS G_CDS: -1.48 Total: -2.34 kcal Total LS contribution 4.16 Total: 4.16 kcal Total: -27.71 -7.09 -34.80 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261104576.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.955 kcal (2) G-P(sol) polarization free energy of solvation -27.710 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.665 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.093 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.803 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.758 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds