Wall clock time and date at job start Mon Mar 30 2020 07:06:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35747 * 117.00107 * 2 1 4 4 C 1.38940 * 119.78432 * 0.02562 * 3 2 1 5 5 C 1.38085 * 120.19800 * 179.97438 * 4 3 2 6 6 O 1.35706 * 120.11866 * 180.02562 * 5 4 3 7 7 C 1.41454 * 119.76648 * 0.28045 * 5 4 3 8 8 C 1.40971 * 120.21133 * 179.72490 * 7 5 4 9 9 H 1.08003 * 120.00064 * 141.18183 * 8 7 5 10 10 C 1.39842 * 119.99534 * 321.18247 * 8 7 5 11 11 N 1.30949 * 120.00343 * 339.29502 * 10 8 7 12 12 Si 1.86802 * 119.99579 * 159.29314 * 10 8 7 13 13 H 1.48502 * 109.47376 * 359.97438 * 12 10 8 14 14 H 1.48492 * 109.47195 * 120.00104 * 12 10 8 15 15 H 1.48504 * 109.46908 * 239.99842 * 12 10 8 16 16 C 1.40900 * 119.58119 * 359.47197 * 7 5 4 17 17 Cl 1.73600 * 120.10192 * 180.25173 * 16 7 5 18 18 C 1.37786 * 119.79456 * 0.52390 * 16 7 5 19 19 O 1.36049 * 119.88288 * 179.69993 * 18 16 7 20 20 C 1.42900 * 117.00305 * 270.02507 * 19 18 16 21 21 H 1.09005 * 109.46836 * 179.97438 * 1 2 3 22 22 H 1.09001 * 109.46962 * 299.99494 * 1 2 3 23 23 H 1.08994 * 109.47436 * 59.99649 * 1 2 3 24 24 H 1.07999 * 119.89692 * 0.02562 * 4 3 2 25 25 H 0.96705 * 114.00587 * 84.64217 * 6 5 4 26 26 H 0.96996 * 120.00251 * 180.02562 * 11 10 8 27 27 H 1.09004 * 109.46902 * 59.99953 * 20 19 18 28 28 H 1.08999 * 109.47057 * 180.02562 * 20 19 18 29 29 H 1.08998 * 109.46864 * 300.00090 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0453 1.2095 0.0000 4 6 1.2843 2.3719 0.0005 5 6 1.9023 3.6067 0.0011 6 8 1.1573 4.7411 0.0021 7 6 3.3146 3.6852 -0.0049 8 6 3.9553 4.9409 -0.0103 9 1 4.8523 5.0920 0.5720 10 6 3.4293 5.9909 -0.7696 11 7 2.6187 5.7364 -1.7660 12 14 3.8832 7.7565 -0.3623 13 1 4.8074 7.7747 0.8000 14 1 4.5489 8.3795 -1.5344 15 1 2.6535 8.5192 -0.0283 16 6 4.0771 2.5003 -0.0001 17 17 5.8112 2.5809 -0.0008 18 6 3.4421 1.2775 -0.0006 19 8 4.1766 0.1323 -0.0021 20 6 4.5262 -0.4125 -1.2760 21 1 -0.3633 -1.0277 -0.0005 22 1 -0.3633 0.5138 0.8900 23 1 -0.3634 0.5138 -0.8899 24 1 0.2061 2.3094 0.0014 25 1 0.8728 5.0241 0.8820 26 1 2.2542 6.4646 -2.2928 27 1 5.1170 0.3151 -1.8326 28 1 5.1093 -1.3225 -1.1344 29 1 3.6187 -0.6459 -1.8328 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000216492725.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:06:59 Heat of formation + Delta-G solvation = -97.844236 kcal Electronic energy + Delta-G solvation = -17555.943277 eV Core-core repulsion = 14471.402634 eV Total energy + Delta-G solvation = -3084.540643 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 258.049 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -39.36279 -37.29551 -37.22922 -35.32267 -34.03746 -33.20060 -29.50215 -28.54387 -26.99207 -25.94380 -24.47386 -21.20312 -20.99429 -17.99527 -17.48591 -16.41026 -16.14453 -15.27380 -15.11671 -14.89964 -14.41661 -13.90333 -13.70034 -13.37465 -13.12037 -12.57165 -11.97884 -11.74110 -11.44919 -11.22573 -11.10481 -11.06529 -10.81593 -10.47175 -10.38993 -9.77033 -9.47463 -9.28622 -9.10907 -8.84714 -7.45430 -7.03431 -6.76698 -4.36658 2.21998 2.53793 3.07284 3.10524 3.15845 3.38373 3.95737 4.26791 4.30311 4.68686 5.18586 5.50242 5.62131 5.64815 5.79638 5.90397 5.93524 6.05120 6.13516 6.40655 6.73740 6.83217 7.06921 7.17470 7.43000 7.63667 7.99877 8.26001 8.49151 8.55134 8.78191 9.07637 10.21390 Molecular weight = 258.05amu Principal moments of inertia in cm(-1) A = 0.022452 B = 0.009241 C = 0.006937 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1246.824572 B = 3029.247663 C = 4035.629015 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 O -0.317 6.317 3 C 0.005 3.995 4 C -0.190 4.190 5 C 0.082 3.918 6 O -0.463 6.463 7 C 0.094 3.906 8 C -0.459 4.459 9 H 0.087 0.913 10 C 0.092 3.908 11 N -0.753 5.753 12 Si 0.902 3.098 13 H -0.261 1.261 14 H -0.276 1.276 15 H -0.272 1.272 16 C -0.108 4.108 17 Cl -0.087 7.087 18 C 0.094 3.906 19 O -0.327 6.327 20 C 0.041 3.959 21 H 0.085 0.915 22 H 0.044 0.956 23 H 0.044 0.956 24 H 0.113 0.887 25 H 0.354 0.646 26 H 0.281 0.719 27 H 0.041 0.959 28 H 0.080 0.920 29 H 0.039 0.961 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.287 -4.152 1.597 5.002 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.232 6.232 3 C -0.040 4.040 4 C -0.209 4.209 5 C 0.036 3.964 6 O -0.269 6.269 7 C 0.090 3.910 8 C -0.487 4.487 9 H 0.105 0.895 10 C -0.130 4.130 11 N -0.376 5.376 12 Si 0.726 3.274 13 H -0.184 1.184 14 H -0.202 1.202 15 H -0.198 1.198 16 C -0.136 4.136 17 Cl -0.058 7.058 18 C 0.050 3.950 19 O -0.244 6.244 20 C -0.053 4.053 21 H 0.104 0.896 22 H 0.063 0.937 23 H 0.063 0.937 24 H 0.131 0.869 25 H 0.206 0.794 26 H 0.091 0.909 27 H 0.060 0.940 28 H 0.099 0.901 29 H 0.057 0.943 Dipole moment (debyes) X Y Z Total from point charges -2.029 -4.351 0.916 4.887 hybrid contribution -0.230 1.120 0.274 1.176 sum -2.259 -3.231 1.190 4.118 Atomic orbital electron populations 1.22790 0.80624 1.02105 1.00523 1.85928 1.19276 1.27137 1.90898 1.18300 0.90106 0.83687 1.11889 1.21024 0.98578 0.92112 1.09229 1.18005 0.88973 0.83928 1.05538 1.84975 1.70339 1.41364 1.30185 1.17490 0.90337 0.91792 0.91415 1.19222 1.10566 0.93777 1.25113 0.89523 1.25685 0.93194 1.00859 0.93306 1.69764 1.21667 1.34890 1.11258 0.86370 0.79239 0.82160 0.79603 1.18441 1.20188 1.19757 1.20703 0.83012 0.92647 1.17267 1.98218 1.11562 1.98680 1.97369 1.17303 0.86063 0.84544 1.07118 1.86004 1.71237 1.38944 1.28183 1.22795 0.99090 0.97766 0.85695 0.89646 0.93722 0.93704 0.86897 0.79416 0.90864 0.94002 0.90148 0.94277 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.54 9.80 101.05 0.99 1.53 15 2 O -0.32 -6.44 10.26 -33.66 -0.35 -6.79 15 3 C 0.00 0.11 6.72 -38.72 -0.26 -0.15 15 4 C -0.19 -4.20 8.94 -39.38 -0.35 -4.55 15 5 C 0.08 1.97 6.18 -38.41 -0.24 1.73 15 6 O -0.46 -10.49 10.40 -18.82 -0.20 -10.69 15 7 C 0.09 2.39 5.37 -106.63 -0.57 1.82 15 8 C -0.46 -11.70 8.10 -37.95 -0.31 -12.01 15 9 H 0.09 2.20 7.55 -52.48 -0.40 1.80 15 10 C 0.09 2.25 4.38 -17.33 -0.08 2.17 15 11 N -0.75 -19.31 11.28 55.54 0.63 -18.69 15 12 Si 0.90 18.41 29.61 -169.99 -5.03 13.37 15 13 H -0.26 -5.30 7.11 56.52 0.40 -4.90 15 14 H -0.28 -5.62 7.11 56.52 0.40 -5.22 15 15 H -0.27 -5.45 7.11 56.52 0.40 -5.05 15 16 C -0.11 -2.65 6.37 -38.74 -0.25 -2.90 15 17 Cl -0.09 -1.95 27.33 -51.86 -1.42 -3.36 15 18 C 0.09 2.23 5.72 -39.15 -0.22 2.01 15 19 O -0.33 -7.18 9.62 -34.60 -0.33 -7.52 15 20 C 0.04 0.74 11.13 101.05 1.13 1.87 15 21 H 0.09 1.02 8.14 -51.93 -0.42 0.60 15 22 H 0.04 0.63 7.64 -51.93 -0.40 0.23 15 23 H 0.04 0.66 7.65 -51.93 -0.40 0.26 15 24 H 0.11 2.20 6.25 -52.49 -0.33 1.87 15 25 H 0.35 6.38 9.06 45.56 0.41 6.79 15 26 H 0.28 6.63 8.30 -40.82 -0.34 6.29 15 27 H 0.04 0.76 8.14 -51.93 -0.42 0.33 15 28 H 0.08 1.17 8.14 -51.93 -0.42 0.75 15 29 H 0.04 0.69 8.14 -51.93 -0.42 0.26 15 LS Contribution 271.55 15.07 4.09 4.09 Total: -1.00 -29.34 271.55 -4.70 -34.04 By element: Atomic # 1 Polarization: 5.96 SS G_CDS: -1.93 Total: 4.03 kcal Atomic # 6 Polarization: -8.32 SS G_CDS: -0.16 Total: -8.48 kcal Atomic # 7 Polarization: -19.31 SS G_CDS: 0.63 Total: -18.69 kcal Atomic # 8 Polarization: -24.12 SS G_CDS: -0.87 Total: -25.00 kcal Atomic # 14 Polarization: 18.41 SS G_CDS: -5.03 Total: 13.37 kcal Atomic # 17 Polarization: -1.95 SS G_CDS: -1.42 Total: -3.36 kcal Total LS contribution 4.09 Total: 4.09 kcal Total: -29.34 -4.70 -34.04 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000216492725.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.808 kcal (2) G-P(sol) polarization free energy of solvation -29.340 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.148 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.696 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.036 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.844 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds