Wall clock time and date at job start Mon Mar 30 2020 06:39:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13592 * 1 3 3 C 1.43205 * 179.97438 * 2 1 4 4 C 1.39711 * 120.85140 * 260.27171 * 3 2 1 5 5 Cl 1.73597 * 120.62020 * 0.02562 * 4 3 2 6 6 C 1.40723 * 118.76071 * 179.75498 * 4 3 2 7 7 C 1.41294 * 119.77892 * 180.24890 * 6 4 3 8 8 H 1.07995 * 120.00543 * 0.28099 * 7 6 4 9 9 C 1.40067 * 119.99587 * 180.27762 * 7 6 4 10 10 N 1.30725 * 120.00553 * 0.02562 * 9 7 6 11 11 Si 1.86809 * 119.99852 * 180.02562 * 9 7 6 12 12 H 1.48493 * 109.47093 * 90.00199 * 11 9 7 13 13 H 1.48493 * 109.46904 * 210.00182 * 11 9 7 14 14 H 1.48508 * 109.46842 * 330.00068 * 11 9 7 15 15 N 1.33629 * 120.43566 * 0.53545 * 6 4 3 16 16 C 1.31392 * 121.87405 * 359.71515 * 15 6 4 17 17 C 1.38616 * 121.21933 * 0.02582 * 16 15 6 18 18 C 1.50700 * 120.29289 * 180.02562 * 17 16 15 19 19 F 1.39903 * 109.47081 * 29.97625 * 18 17 16 20 20 F 1.39901 * 109.47557 * 149.97712 * 18 17 16 21 21 H 0.96999 * 120.00206 * 179.97438 * 10 9 7 22 22 H 1.08001 * 119.39365 * 180.02562 * 16 15 6 23 23 H 1.09005 * 109.47222 * 269.97660 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2843 0.2036 1.1822 5 17 2.4551 0.4603 2.6855 6 6 4.6906 0.1904 1.1325 7 6 5.4365 0.3881 2.3161 8 1 4.9274 0.5442 3.2556 9 6 6.8365 0.3816 2.2709 10 7 7.4529 0.1931 1.1336 11 14 7.8227 0.6423 3.8358 12 1 8.0851 -0.6697 4.4799 13 1 9.1132 1.2978 3.5041 14 1 7.0537 1.5062 4.7674 15 7 5.3252 -0.0023 -0.0277 16 6 4.6727 -0.1901 -1.1525 17 6 3.2870 -0.1964 -1.1869 18 6 2.5598 -0.4144 -2.4888 19 9 3.3359 -1.2224 -3.3267 20 9 1.3348 -1.0423 -2.2393 21 1 8.4224 0.1890 1.1023 22 1 5.2262 -0.3424 -2.0673 23 1 2.3837 0.5467 -2.9719 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC000238543356.mol2 23 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:39:57 Heat of formation + Delta-G solvation = -64.456963 kcal Electronic energy + Delta-G solvation = -16311.862689 eV Core-core repulsion = 13014.141968 eV Total energy + Delta-G solvation = -3297.720721 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 258.007 amu Computer time = 0.21 seconds Orbital eigenvalues (eV) -49.86508 -47.89854 -40.53739 -37.69889 -37.22925 -35.83687 -33.32685 -32.30667 -29.18268 -25.99702 -25.15876 -22.94259 -20.84578 -18.83228 -18.32594 -18.22428 -17.51034 -17.29585 -16.52501 -15.72051 -15.38888 -15.29038 -14.72926 -14.48980 -14.28556 -14.10587 -13.94559 -13.81985 -13.32026 -12.99852 -12.94436 -12.89200 -12.61579 -12.11198 -12.00416 -11.54202 -11.31571 -10.31884 -9.87844 -9.70175 -8.55385 -6.77985 -0.09532 0.48376 1.41275 1.45701 1.51619 1.58433 1.60722 2.13684 2.19181 2.64178 2.79555 3.04022 3.48193 3.55920 3.82806 4.10836 4.18180 4.44314 4.73573 4.89276 5.05272 5.16003 5.61082 6.06913 6.30530 6.35742 6.61233 7.79685 8.19469 Molecular weight = 258.01amu Principal moments of inertia in cm(-1) A = 0.025319 B = 0.008036 C = 0.006157 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1105.621464 B = 3483.678983 C = 4546.777243 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.434 5.434 2 C 0.276 3.724 3 C 0.069 3.931 4 C -0.153 4.153 5 Cl -0.075 7.075 6 C 0.231 3.769 7 C -0.400 4.400 8 H 0.107 0.893 9 C 0.025 3.975 10 N -0.717 5.717 11 Si 0.985 3.015 12 H -0.261 1.261 13 H -0.263 1.263 14 H -0.254 1.254 15 N -0.489 5.489 16 C 0.176 3.824 17 C -0.338 4.338 18 C 0.334 3.666 19 F -0.205 7.205 20 F -0.221 7.221 21 H 0.293 0.707 22 H 0.166 0.834 23 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.676 1.424 -1.481 2.163 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.110 5.110 2 C -0.038 4.038 3 C 0.059 3.941 4 C -0.188 4.188 5 Cl -0.047 7.047 6 C 0.109 3.891 7 C -0.428 4.428 8 H 0.125 0.875 9 C -0.202 4.202 10 N -0.336 5.336 11 Si 0.805 3.195 12 H -0.186 1.186 13 H -0.187 1.187 14 H -0.177 1.177 15 N -0.201 5.201 16 C 0.006 3.994 17 C -0.347 4.347 18 C 0.281 3.719 19 F -0.186 7.186 20 F -0.202 7.202 21 H 0.104 0.896 22 H 0.183 0.817 23 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -0.023 1.409 -1.400 1.987 hybrid contribution -0.283 -0.156 0.571 0.656 sum -0.306 1.253 -0.829 1.533 Atomic orbital electron populations 1.81044 1.12123 1.08883 1.08955 1.25527 0.92556 0.93331 0.92434 1.15498 0.83558 1.01662 0.93362 1.21905 0.93212 1.18096 0.85606 1.98245 1.77914 1.95422 1.33127 1.18715 0.86210 0.90890 0.93266 1.20400 0.92252 1.35555 0.94642 0.87496 1.27029 0.98987 0.93015 1.01174 1.70102 1.11597 1.24008 1.27890 0.85118 0.77636 0.79838 0.76949 1.18575 1.18697 1.17721 1.68909 1.36497 1.17593 0.97135 1.22769 0.89112 0.89896 0.97617 1.20761 0.95930 1.24843 0.93130 1.20300 0.73957 0.90273 0.87420 1.92944 1.75723 1.77062 1.72912 1.92938 1.46665 1.85686 1.94910 0.89584 0.81694 0.83517 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -17.69 18.45 19.00 0.35 -17.34 14 2 C 0.28 11.11 11.84 88.33 1.05 12.16 14 3 C 0.07 2.82 5.73 -21.21 -0.12 2.70 14 4 C -0.15 -6.71 6.43 23.23 0.15 -6.56 14 5 Cl -0.08 -3.00 26.58 -2.72 -0.07 -3.08 14 6 C 0.23 10.90 6.56 40.23 0.26 11.16 14 7 C -0.40 -18.30 8.83 23.47 0.21 -18.10 14 8 H 0.11 4.63 6.65 -2.91 -0.02 4.61 14 9 C 0.02 1.05 5.50 85.30 0.47 1.52 14 10 N -0.72 -32.15 11.46 21.84 0.25 -31.90 14 11 Si 0.99 32.04 29.56 68.60 2.03 34.07 14 12 H -0.26 -8.35 7.11 99.48 0.71 -7.64 14 13 H -0.26 -8.12 7.11 99.48 0.71 -7.41 14 14 H -0.25 -8.10 7.11 99.48 0.71 -7.39 14 15 N -0.49 -22.82 7.83 -189.25 -1.48 -24.30 14 16 C 0.18 6.98 10.55 84.85 0.90 7.88 14 17 C -0.34 -12.76 5.80 -19.31 -0.11 -12.87 14 18 C 0.33 10.50 5.48 71.24 0.39 10.89 14 19 F -0.21 -6.44 16.49 44.97 0.74 -5.70 14 20 F -0.22 -7.90 14.68 44.97 0.66 -7.24 14 21 H 0.29 11.65 8.29 -92.71 -0.77 10.89 14 22 H 0.17 5.63 7.60 -2.91 -0.02 5.60 14 23 H 0.15 3.49 8.14 -2.38 -0.02 3.47 14 Total: -1.00 -51.53 243.78 6.95 -44.57 By element: Atomic # 1 Polarization: 0.83 SS G_CDS: 1.29 Total: 2.12 kcal Atomic # 6 Polarization: 5.60 SS G_CDS: 3.19 Total: 8.78 kcal Atomic # 7 Polarization: -72.66 SS G_CDS: -0.88 Total: -73.54 kcal Atomic # 9 Polarization: -14.34 SS G_CDS: 1.40 Total: -12.94 kcal Atomic # 14 Polarization: 32.04 SS G_CDS: 2.03 Total: 34.07 kcal Atomic # 17 Polarization: -3.00 SS G_CDS: -0.07 Total: -3.08 kcal Total: -51.53 6.95 -44.57 kcal The number of atoms in the molecule is 23 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000238543356.mol2 23 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.883 kcal (2) G-P(sol) polarization free energy of solvation -51.528 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.411 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.954 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.574 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.457 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.21 seconds