Wall clock time and date at job start Mon Mar 30 2020 06:40:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13598 * 1 3 3 C 1.43201 * 179.97438 * 2 1 4 4 C 1.39979 * 120.41962 * 251.53081 * 3 2 1 5 5 N 1.31835 * 121.13089 * 180.02562 * 4 3 2 6 6 C 1.31687 * 122.14597 * 359.97438 * 5 4 3 7 7 Cl 1.73604 * 119.65658 * 179.97438 * 6 5 4 8 8 C 1.40981 * 120.69280 * 359.97351 * 6 5 4 9 9 C 1.41387 * 120.60217 * 180.02562 * 8 6 5 10 10 H 1.07996 * 120.00567 * 135.58205 * 9 8 6 11 11 C 1.39940 * 119.99749 * 315.58000 * 9 8 6 12 12 N 1.30835 * 120.00171 * 336.18526 * 11 9 8 13 13 Si 1.86800 * 119.99804 * 156.17644 * 11 9 8 14 14 H 1.48504 * 109.47060 * 0.02562 * 13 11 9 15 15 H 1.48497 * 109.46920 * 120.00237 * 13 11 9 16 16 H 1.48494 * 109.47194 * 240.00181 * 13 11 9 17 17 C 1.39487 * 120.42649 * 71.77326 * 3 2 1 18 18 C 1.50703 * 120.95890 * 359.97438 * 17 3 2 19 19 F 1.39896 * 109.47260 * 29.57549 * 18 17 3 20 20 F 1.39903 * 109.46681 * 149.57521 * 18 17 3 21 21 H 1.07993 * 119.43211 * 0.02924 * 4 3 2 22 22 H 0.96994 * 119.99828 * 0.88005 * 12 11 9 23 23 H 1.08999 * 109.47163 * 269.57510 * 18 17 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2766 0.3834 1.1449 5 7 4.5948 0.3896 1.1603 6 6 5.3094 0.0395 0.1110 7 17 7.0427 0.0723 0.2026 8 6 4.6817 -0.3617 -1.0858 9 6 5.4508 -0.7377 -2.2110 10 1 5.1846 -1.6178 -2.7775 11 6 6.5570 0.0307 -2.5907 12 7 6.6272 1.2911 -2.2469 13 14 7.9337 -0.7434 -3.5883 14 1 7.6159 -2.1709 -3.8461 15 1 8.0717 -0.0261 -4.8812 16 1 9.2075 -0.6484 -2.8311 17 6 3.2746 -0.3752 -1.1424 18 6 2.5530 -0.7899 -2.3988 19 9 1.3221 -0.1288 -2.4695 20 9 3.3278 -0.4535 -3.5141 21 1 2.7341 0.6785 2.0308 22 1 5.9186 1.6896 -1.7180 23 1 2.3866 -1.8670 -2.3836 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000238550555.mol2 23 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:40:09 Heat of formation + Delta-G solvation = -55.731568 kcal Electronic energy + Delta-G solvation = -16840.939427 eV Core-core repulsion = 13543.597067 eV Total energy + Delta-G solvation = -3297.342360 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 258.007 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -48.37476 -46.35758 -39.24167 -36.24608 -35.44662 -34.53345 -32.37085 -30.32185 -26.74631 -25.38959 -23.13294 -21.53485 -19.25157 -17.16476 -17.02857 -16.92675 -16.75973 -15.48371 -14.49231 -14.32411 -14.00489 -13.65403 -13.26803 -13.06973 -12.96499 -12.75767 -12.60966 -12.10087 -12.03372 -11.66225 -11.48793 -10.79234 -10.62881 -10.56668 -10.37168 -10.14726 -9.19386 -8.95343 -8.77241 -7.92578 -7.57522 -4.99162 1.22225 2.01685 2.90131 3.03904 3.08693 3.11522 3.20933 3.50898 3.80874 4.25099 4.30763 4.42405 4.71742 4.84089 5.17493 5.47992 5.58882 5.93960 6.08542 6.46602 6.74274 6.93797 7.35988 7.49112 7.83405 7.88747 8.26612 8.66923 9.71167 Molecular weight = 258.01amu Principal moments of inertia in cm(-1) A = 0.024136 B = 0.010390 C = 0.007623 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1159.806161 B = 2694.374392 C = 3672.281178 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.434 5.434 2 C 0.270 3.730 3 C -0.013 4.013 4 C 0.019 3.981 5 N -0.444 5.444 6 C 0.110 3.890 7 Cl -0.039 7.039 8 C 0.066 3.934 9 C -0.468 4.468 10 H 0.097 0.903 11 C 0.041 3.959 12 N -0.754 5.754 13 Si 1.069 2.931 14 H -0.272 1.272 15 H -0.274 1.274 16 H -0.270 1.270 17 C -0.195 4.195 18 C 0.330 3.670 19 F -0.209 7.209 20 F -0.181 7.181 21 H 0.148 0.852 22 H 0.296 0.704 23 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.665 -3.803 -0.391 3.881 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.110 5.110 2 C -0.045 4.045 3 C -0.019 4.019 4 C -0.138 4.138 5 N -0.153 5.153 6 C -0.062 4.062 7 Cl -0.010 7.010 8 C 0.059 3.941 9 C -0.495 4.495 10 H 0.115 0.885 11 C -0.184 4.184 12 N -0.373 5.373 13 Si 0.892 3.108 14 H -0.196 1.196 15 H -0.199 1.199 16 H -0.195 1.195 17 C -0.206 4.206 18 C 0.276 3.724 19 F -0.190 7.190 20 F -0.162 7.162 21 H 0.165 0.835 22 H 0.109 0.891 23 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges 0.891 -3.119 -0.366 3.265 hybrid contribution -1.408 -0.311 0.062 1.444 sum -0.517 -3.430 -0.305 3.483 Atomic orbital electron populations 1.81097 1.12055 1.08813 1.09061 1.25657 0.92657 0.93589 0.92589 1.16551 0.84285 1.04490 0.96551 1.21655 0.87955 1.07806 0.96416 1.66405 1.07338 1.11855 1.29711 1.22098 0.86062 1.08131 0.89921 1.98319 1.07964 1.96522 1.98220 1.17636 0.89658 0.93150 0.93649 1.20661 1.08657 1.11058 1.09133 0.88516 1.27018 0.99577 0.93913 0.97921 1.70423 1.34422 1.11201 1.21282 0.83526 0.74809 0.76179 0.76335 1.19618 1.19899 1.19503 1.20531 0.94256 1.12369 0.93427 1.19846 0.74565 0.95379 0.82618 1.92955 1.45353 1.84246 1.96461 1.93040 1.75086 1.94209 1.53854 0.83467 0.89127 0.87696 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -8.54 18.44 41.84 0.77 -7.77 14 2 C 0.27 5.14 12.68 -22.47 -0.29 4.86 14 3 C -0.01 -0.25 5.72 -106.85 -0.61 -0.86 14 4 C 0.02 0.36 10.91 -16.90 -0.18 0.18 14 5 N -0.44 -9.50 10.30 -9.33 -0.10 -9.59 14 6 C 0.11 2.45 6.44 -16.58 -0.11 2.34 14 7 Cl -0.04 -0.82 25.15 -51.86 -1.30 -2.13 14 8 C 0.07 1.47 4.81 -106.68 -0.51 0.95 14 9 C -0.47 -10.33 6.36 -37.75 -0.24 -10.57 14 10 H 0.10 2.05 7.41 -52.49 -0.39 1.66 14 11 C 0.04 0.91 3.62 -17.34 -0.06 0.84 14 12 N -0.75 -17.72 11.96 55.55 0.66 -17.06 14 13 Si 1.07 19.44 29.99 -169.99 -5.10 14.34 14 14 H -0.27 -4.62 7.11 56.52 0.40 -4.22 14 15 H -0.27 -4.91 7.11 56.52 0.40 -4.51 14 16 H -0.27 -4.85 7.11 56.52 0.40 -4.45 14 17 C -0.20 -4.02 5.85 -103.18 -0.60 -4.62 14 18 C 0.33 6.20 5.28 36.01 0.19 6.39 14 19 F -0.21 -4.11 14.69 2.25 0.03 -4.07 14 20 F -0.18 -3.71 14.59 2.25 0.03 -3.68 14 21 H 0.15 2.40 8.06 -52.49 -0.42 1.98 14 22 H 0.30 7.29 7.01 -40.82 -0.29 7.00 14 23 H 0.11 1.63 8.14 -51.93 -0.42 1.21 14 LS Contribution 238.74 15.07 3.60 3.60 Total: -1.00 -24.04 238.74 -4.13 -28.17 By element: Atomic # 1 Polarization: -1.01 SS G_CDS: -0.32 Total: -1.32 kcal Atomic # 6 Polarization: 1.93 SS G_CDS: -2.42 Total: -0.49 kcal Atomic # 7 Polarization: -35.76 SS G_CDS: 1.34 Total: -34.42 kcal Atomic # 9 Polarization: -7.82 SS G_CDS: 0.07 Total: -7.75 kcal Atomic # 14 Polarization: 19.44 SS G_CDS: -5.10 Total: 14.34 kcal Atomic # 17 Polarization: -0.82 SS G_CDS: -1.30 Total: -2.13 kcal Total LS contribution 3.60 Total: 3.60 kcal Total: -24.04 -4.13 -28.17 kcal The number of atoms in the molecule is 23 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000238550555.mol2 23 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.562 kcal (2) G-P(sol) polarization free energy of solvation -24.037 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.599 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.132 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.169 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.732 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds