Wall clock time and date at job start Mon Mar 30 2020 06:40:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13610 * 1 3 3 C 1.43197 * 179.97438 * 2 1 4 4 C 1.40183 * 120.83528 * 144.70786 * 3 2 1 5 5 C 1.38765 * 119.37428 * 179.73009 * 4 3 2 6 6 Cl 1.73603 * 119.42858 * 180.23378 * 5 4 3 7 7 N 1.31514 * 121.13745 * 0.25199 * 5 4 3 8 8 C 1.33619 * 121.83438 * 0.02562 * 7 5 4 9 9 C 1.41384 * 119.75762 * 180.02562 * 8 7 5 10 10 H 1.07991 * 120.00253 * 172.99456 * 9 8 7 11 11 C 1.40057 * 119.99805 * 352.99316 * 9 8 7 12 12 N 1.30733 * 120.00026 * 359.97438 * 11 9 8 13 13 Si 1.86797 * 120.00122 * 180.02562 * 11 9 8 14 14 H 1.48494 * 109.47440 * 89.99720 * 13 11 9 15 15 H 1.48497 * 109.47448 * 210.00090 * 13 11 9 16 16 H 1.48508 * 109.46941 * 329.99670 * 13 11 9 17 17 C 1.39499 * 120.84040 * 324.96006 * 3 2 1 18 18 C 1.50704 * 120.57799 * 0.02562 * 17 3 2 19 19 F 1.39897 * 109.46927 * 122.17803 * 18 17 3 20 20 F 1.39900 * 109.47060 * 242.17693 * 18 17 3 21 21 H 1.07995 * 120.31114 * 0.02562 * 4 3 2 22 22 H 0.96996 * 119.99766 * 179.97438 * 12 11 9 23 23 H 1.09002 * 109.47103 * 2.17728 * 18 17 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5681 0.0006 0.0000 4 6 3.2862 0.9834 -0.6954 5 6 4.6734 0.9585 -0.6703 6 17 5.5640 2.1784 -1.5260 7 7 5.3249 0.0264 -0.0098 8 6 4.6880 -0.9356 0.6642 9 6 5.4325 -1.9158 1.3598 10 1 4.9272 -2.6264 1.9970 11 6 6.8255 -1.9653 1.2225 12 7 7.4372 -1.1055 0.4508 13 14 7.8091 -3.2608 2.1410 14 1 7.9317 -4.4781 1.2995 15 1 9.1626 -2.7311 2.4455 16 1 7.1149 -3.6030 3.4084 17 6 3.2836 -0.9797 0.6877 18 6 2.5631 -2.0639 1.4470 19 9 2.9579 -3.3148 0.9609 20 9 2.8802 -1.9706 2.8064 21 1 2.7647 1.7555 -1.2416 22 1 8.4019 -1.1396 0.3560 23 1 1.4875 -1.9460 1.3159 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC000238556291.mol2 23 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:40:49 Heat of formation + Delta-G solvation = -64.030863 kcal Electronic energy + Delta-G solvation = -16521.688672 eV Core-core repulsion = 13223.986428 eV Total energy + Delta-G solvation = -3297.702244 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 258.007 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -49.79904 -47.75409 -40.62992 -37.91600 -37.32908 -35.68097 -33.60466 -32.45680 -28.62392 -26.86098 -25.03395 -22.82983 -20.85813 -18.94583 -18.22864 -18.02711 -17.81436 -16.98174 -16.56317 -15.97640 -15.36446 -14.97937 -14.66256 -14.63871 -14.37026 -14.17904 -14.16214 -13.88298 -13.35805 -13.07139 -12.89128 -12.83836 -12.35031 -12.04377 -11.97449 -11.71222 -11.27983 -10.44961 -9.98862 -9.77835 -8.55865 -6.80371 -0.14116 0.43199 1.05631 1.42320 1.47069 1.48012 1.56493 2.04059 2.18226 2.63166 2.70275 2.95750 3.43600 3.45707 3.78630 4.25563 4.28015 4.50561 4.57718 4.94457 5.05460 5.23501 5.44624 6.01124 6.21872 6.29953 6.60409 7.62099 8.20078 Molecular weight = 258.01amu Principal moments of inertia in cm(-1) A = 0.015683 B = 0.011407 C = 0.006891 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1784.923559 B = 2454.147798 C = 4062.430858 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.428 5.428 2 C 0.281 3.719 3 C 0.089 3.911 4 C -0.256 4.256 5 C 0.223 3.777 6 Cl -0.049 7.049 7 N -0.490 5.490 8 C 0.259 3.741 9 C -0.412 4.412 10 H 0.100 0.900 11 C 0.026 3.974 12 N -0.724 5.724 13 Si 0.982 3.018 14 H -0.260 1.260 15 H -0.262 1.262 16 H -0.256 1.256 17 C -0.309 4.309 18 C 0.340 3.660 19 F -0.205 7.205 20 F -0.208 7.208 21 H 0.152 0.848 22 H 0.291 0.709 23 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.475 0.171 -0.024 1.485 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.104 5.104 2 C -0.034 4.034 3 C 0.079 3.921 4 C -0.283 4.283 5 C 0.047 3.953 6 Cl -0.021 7.021 7 N -0.204 5.204 8 C 0.137 3.863 9 C -0.440 4.440 10 H 0.118 0.882 11 C -0.200 4.200 12 N -0.343 5.343 13 Si 0.802 3.198 14 H -0.184 1.184 15 H -0.186 1.186 16 H -0.180 1.180 17 C -0.318 4.318 18 C 0.286 3.714 19 F -0.187 7.187 20 F -0.189 7.189 21 H 0.170 0.830 22 H 0.102 0.898 23 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges -1.994 0.272 -0.123 2.016 hybrid contribution 0.283 -0.253 0.150 0.409 sum -1.711 0.018 0.027 1.711 Atomic orbital electron populations 1.81206 1.11733 1.08610 1.08883 1.25462 0.92158 0.92830 0.92940 1.15424 0.83565 0.95530 0.97611 1.21074 0.91782 1.04331 1.11066 1.21747 0.88267 0.91398 0.93931 1.98321 1.77655 1.51719 1.74431 1.67890 1.38600 1.03126 1.10820 1.18190 0.87427 0.90540 0.90113 1.20276 0.92795 1.10277 1.20678 0.88180 1.26981 0.99003 0.98488 0.95523 1.70104 1.11642 1.28219 1.24320 0.85172 0.77577 0.77803 0.79290 1.18436 1.18624 1.17976 1.21047 0.95618 1.02524 1.12602 1.19897 0.97579 0.78960 0.74987 1.92953 1.93305 1.44519 1.87899 1.92949 1.94989 1.96207 1.34756 0.83004 0.89794 0.86669 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -14.66 18.54 19.00 0.35 -14.31 14 2 C 0.28 9.55 13.71 88.33 1.21 10.76 14 3 C 0.09 3.33 5.75 -21.26 -0.12 3.21 14 4 C -0.26 -9.49 9.63 22.87 0.22 -9.27 14 5 C 0.22 9.39 7.27 84.87 0.62 10.01 14 6 Cl -0.05 -1.79 29.10 -2.72 -0.08 -1.87 14 7 N -0.49 -23.86 7.85 -180.23 -1.41 -25.27 14 8 C 0.26 12.54 6.53 40.20 0.26 12.80 14 9 C -0.41 -19.88 8.16 23.49 0.19 -19.69 14 10 H 0.10 4.71 5.56 -2.92 -0.02 4.69 14 11 C 0.03 1.19 5.49 85.30 0.47 1.66 14 12 N -0.72 -34.52 11.49 21.84 0.25 -34.27 14 13 Si 0.98 34.63 29.56 68.60 2.03 36.65 14 14 H -0.26 -8.93 7.11 99.48 0.71 -8.22 14 15 H -0.26 -8.74 7.11 99.48 0.71 -8.03 14 16 H -0.26 -8.95 7.11 99.48 0.71 -8.25 14 17 C -0.31 -13.05 5.48 -19.00 -0.10 -13.15 14 18 C 0.34 12.95 4.80 71.24 0.34 13.30 14 19 F -0.21 -8.24 16.01 44.97 0.72 -7.52 14 20 F -0.21 -8.28 16.09 44.97 0.72 -7.55 14 21 H 0.15 4.67 8.06 -2.91 -0.02 4.65 14 22 H 0.29 12.46 8.29 -92.71 -0.77 11.69 14 23 H 0.12 3.73 6.56 -2.39 -0.02 3.72 14 Total: -1.00 -51.24 245.24 6.96 -44.28 By element: Atomic # 1 Polarization: -1.05 SS G_CDS: 1.30 Total: 0.25 kcal Atomic # 6 Polarization: 6.53 SS G_CDS: 3.09 Total: 9.62 kcal Atomic # 7 Polarization: -73.04 SS G_CDS: -0.81 Total: -73.85 kcal Atomic # 9 Polarization: -16.51 SS G_CDS: 1.44 Total: -15.07 kcal Atomic # 14 Polarization: 34.63 SS G_CDS: 2.03 Total: 36.65 kcal Atomic # 17 Polarization: -1.79 SS G_CDS: -0.08 Total: -1.87 kcal Total: -51.24 6.96 -44.28 kcal The number of atoms in the molecule is 23 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000238556291.mol2 23 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.754 kcal (2) G-P(sol) polarization free energy of solvation -51.241 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.995 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.964 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.277 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.031 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds