Wall clock time and date at job start Mon Mar 30 2020 06:40:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13606 * 1 3 3 C 1.43196 * 179.97438 * 2 1 4 4 N 1.33213 * 119.46825 * 255.70336 * 3 2 1 5 5 C 1.31078 * 121.74045 * 180.02562 * 4 3 2 6 6 C 1.41151 * 120.45626 * 359.97438 * 5 4 3 7 7 C 1.40980 * 120.54082 * 180.02562 * 6 5 4 8 8 H 1.08002 * 119.99968 * 154.75407 * 7 6 5 9 9 C 1.40220 * 119.99861 * 334.74647 * 7 6 5 10 10 N 1.30659 * 119.99798 * 343.22466 * 9 7 6 11 11 Si 1.86798 * 119.99843 * 163.21568 * 9 7 6 12 12 H 1.48502 * 109.47086 * 60.00570 * 11 9 7 13 13 H 1.48498 * 109.47163 * 180.02562 * 11 9 7 14 14 H 1.48498 * 109.47346 * 300.00695 * 11 9 7 15 15 C 1.41193 * 118.92055 * 359.97438 * 6 5 4 16 16 C 1.50695 * 120.79909 * 180.02562 * 15 6 5 17 17 F 1.39901 * 109.47561 * 300.00220 * 16 15 6 18 18 F 1.39905 * 109.47045 * 60.00438 * 16 15 6 19 19 C 1.36856 * 118.39806 * 359.72916 * 15 6 5 20 20 Cl 1.73603 * 120.29008 * 180.28670 * 19 15 6 21 21 H 1.08004 * 119.77262 * 180.02562 * 5 4 3 22 22 H 0.97013 * 119.99515 * 179.97438 * 10 9 7 23 23 H 1.08999 * 109.47559 * 180.02562 * 16 15 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 7 3.2232 0.2873 1.1239 5 6 4.5330 0.3012 1.1741 6 6 5.2962 0.0084 0.0235 7 6 6.7050 0.0223 0.0756 8 1 7.2772 -0.5677 -0.6251 9 6 7.3633 0.8022 1.0371 10 7 6.7187 1.7530 1.6598 11 14 9.1616 0.4817 1.4279 12 1 9.9754 0.6648 0.1992 13 1 9.6188 1.4343 2.4713 14 1 9.3202 -0.9089 1.9240 15 6 4.6259 -0.2998 -1.1804 16 6 5.3988 -0.6195 -2.4339 17 9 6.2033 0.4723 -2.7771 18 9 6.2050 -1.7411 -2.2114 19 6 3.2573 -0.3072 -1.1798 20 17 2.3832 -0.6868 -2.6308 21 1 5.0316 0.5376 2.1025 22 1 7.1741 2.2923 2.3253 23 1 4.7030 -0.8274 -3.2468 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000238559404.mol2 23 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:40:26 Heat of formation + Delta-G solvation = -64.099619 kcal Electronic energy + Delta-G solvation = -16514.135062 eV Core-core repulsion = 13216.429836 eV Total energy + Delta-G solvation = -3297.705226 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 258.007 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -48.21209 -46.17620 -39.09266 -36.26503 -35.71421 -34.55324 -32.35248 -30.39869 -27.33088 -25.37314 -22.78126 -21.82309 -18.34252 -18.22390 -17.21215 -16.45590 -15.88814 -15.26371 -15.03899 -14.85843 -13.84945 -13.53522 -13.11506 -12.90248 -12.58359 -12.25787 -12.19836 -12.08535 -12.00783 -11.58620 -11.56485 -11.45054 -11.22143 -10.91813 -10.65563 -10.32158 -9.90593 -8.95699 -8.59030 -8.07894 -7.58370 -5.19465 1.64652 2.04145 2.48366 2.73388 2.77159 2.80270 3.42336 3.45913 3.57576 4.22811 4.44807 4.66656 4.97316 5.05706 5.33035 5.83050 5.96265 6.02255 6.37710 6.43433 6.60258 6.79549 7.27154 7.66445 7.88233 7.95042 8.29515 8.97979 9.34116 Molecular weight = 258.01amu Principal moments of inertia in cm(-1) A = 0.024055 B = 0.008878 C = 0.006862 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1163.741228 B = 3153.020628 C = 4079.463096 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.465 5.465 2 C 0.303 3.697 3 C -0.001 4.001 4 N -0.418 5.418 5 C 0.075 3.925 6 C 0.098 3.902 7 C -0.378 4.378 8 H 0.105 0.895 9 C 0.068 3.932 10 N -0.741 5.741 11 Si 0.928 3.072 12 H -0.255 1.255 13 H -0.270 1.270 14 H -0.253 1.253 15 C -0.271 4.271 16 C 0.333 3.667 17 F -0.199 7.199 18 F -0.205 7.205 19 C 0.058 3.942 20 Cl -0.086 7.086 21 H 0.169 0.831 22 H 0.302 0.698 23 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.857 -2.063 -3.027 6.083 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.144 5.144 2 C -0.011 4.011 3 C -0.129 4.129 4 N -0.126 5.126 5 C -0.101 4.101 6 C 0.091 3.909 7 C -0.405 4.405 8 H 0.123 0.877 9 C -0.159 4.159 10 N -0.362 5.362 11 Si 0.750 3.250 12 H -0.179 1.179 13 H -0.194 1.194 14 H -0.177 1.177 15 C -0.278 4.278 16 C 0.279 3.721 17 F -0.181 7.181 18 F -0.186 7.186 19 C 0.026 3.974 20 Cl -0.057 7.057 21 H 0.185 0.815 22 H 0.114 0.886 23 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 2.456 -1.713 -2.325 3.791 hybrid contribution 1.714 -0.143 -0.662 1.843 sum 4.170 -1.856 -2.986 5.455 Atomic orbital electron populations 1.81056 1.11907 1.12823 1.08636 1.25051 0.91756 0.91933 0.92330 1.15289 0.85270 1.21947 0.90438 1.67210 1.11549 1.09195 1.24686 1.23152 0.86626 1.01614 0.98671 1.18328 0.94606 0.88339 0.89660 1.20182 0.91192 1.18178 1.10970 0.87703 1.26361 1.03182 0.92828 0.93504 1.69643 1.40079 1.10391 1.16046 0.85963 0.78911 0.80326 0.79800 1.17901 1.19391 1.17716 1.19735 0.90925 1.20809 0.96283 1.19927 0.84005 0.72833 0.95325 1.92972 1.76378 1.55622 1.93087 1.92937 1.76468 1.53081 1.96153 1.20991 0.91312 0.98779 0.86280 1.98316 1.76594 1.92751 1.38076 0.81467 0.88616 0.87940 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -10.30 18.54 41.84 0.78 -9.52 14 2 C 0.30 6.64 14.55 -22.47 -0.33 6.32 14 3 C 0.00 -0.02 6.60 -84.66 -0.56 -0.57 14 4 N -0.42 -9.63 10.26 -10.34 -0.11 -9.74 14 5 C 0.08 1.70 9.88 -16.77 -0.17 1.53 14 6 C 0.10 2.20 5.57 -106.63 -0.59 1.60 14 7 C -0.38 -8.14 7.92 -37.80 -0.30 -8.44 14 8 H 0.11 2.23 6.19 -52.49 -0.32 1.90 14 9 C 0.07 1.35 5.17 -17.31 -0.09 1.26 14 10 N -0.74 -15.11 10.95 55.56 0.61 -14.50 14 11 Si 0.93 14.90 29.59 -169.99 -5.03 9.87 14 12 H -0.26 -4.16 7.11 56.52 0.40 -3.76 14 13 H -0.27 -4.17 7.11 56.52 0.40 -3.77 14 14 H -0.25 -4.05 7.11 56.52 0.40 -3.65 14 15 C -0.27 -5.75 5.41 -104.00 -0.56 -6.32 14 16 C 0.33 6.34 4.87 36.00 0.18 6.51 14 17 F -0.20 -4.01 16.61 2.25 0.04 -3.97 14 18 F -0.21 -3.95 15.81 2.25 0.04 -3.91 14 19 C 0.06 1.21 6.31 -39.40 -0.25 0.96 14 20 Cl -0.09 -1.53 26.13 -51.86 -1.36 -2.89 14 21 H 0.17 3.67 6.19 -52.48 -0.32 3.35 14 22 H 0.30 5.44 8.29 -40.81 -0.34 5.10 14 23 H 0.10 1.70 6.26 -51.93 -0.32 1.37 14 LS Contribution 242.44 15.07 3.65 3.65 Total: -1.00 -23.45 242.44 -4.16 -27.61 By element: Atomic # 1 Polarization: 0.66 SS G_CDS: -0.11 Total: 0.55 kcal Atomic # 6 Polarization: 5.52 SS G_CDS: -2.67 Total: 2.85 kcal Atomic # 7 Polarization: -35.04 SS G_CDS: 1.28 Total: -33.76 kcal Atomic # 9 Polarization: -7.96 SS G_CDS: 0.07 Total: -7.88 kcal Atomic # 14 Polarization: 14.90 SS G_CDS: -5.03 Total: 9.87 kcal Atomic # 17 Polarization: -1.53 SS G_CDS: -1.36 Total: -2.89 kcal Total LS contribution 3.65 Total: 3.65 kcal Total: -23.45 -4.16 -27.61 kcal The number of atoms in the molecule is 23 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000238559404.mol2 23 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.490 kcal (2) G-P(sol) polarization free energy of solvation -23.450 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.940 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.159 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.610 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.100 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds