Wall clock time and date at job start Mon Mar 30 2020 06:41:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13606 * 1 3 3 C 1.43193 * 179.97438 * 2 1 4 4 N 1.32727 * 119.99130 * 64.35437 * 3 2 1 5 5 C 1.31702 * 121.70197 * 180.27244 * 4 3 2 6 6 Cl 1.73602 * 119.24920 * 179.97438 * 5 4 3 7 7 C 1.39219 * 121.50034 * 359.97438 * 5 4 3 8 8 C 1.50700 * 120.10236 * 180.02562 * 7 5 4 9 9 F 1.39896 * 109.46808 * 29.98057 * 8 7 5 10 10 F 1.39905 * 109.47073 * 149.98044 * 8 7 5 11 11 C 1.36740 * 119.79844 * 0.02562 * 7 5 4 12 12 C 1.41264 * 118.41030 * 359.97438 * 11 7 5 13 13 C 1.40763 * 120.71579 * 180.02562 * 12 11 7 14 14 H 1.07995 * 119.99886 * 155.31809 * 13 12 11 15 15 C 1.40259 * 119.99582 * 335.32295 * 13 12 11 16 16 N 1.30655 * 120.00127 * 343.84343 * 15 13 12 17 17 Si 1.86801 * 119.99739 * 163.84806 * 15 13 12 18 18 H 1.48500 * 109.47099 * 59.99907 * 17 15 13 19 19 H 1.48503 * 109.46889 * 179.97438 * 17 15 13 20 20 H 1.48497 * 109.47078 * 299.99411 * 17 15 13 21 21 H 1.09000 * 109.46708 * 269.97636 * 8 7 5 22 22 H 1.08004 * 120.79458 * 180.02562 * 11 7 5 23 23 H 0.97004 * 119.99814 * 185.17748 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 7 3.2317 -0.4966 -1.0363 5 6 4.5481 -0.5178 -1.0694 6 17 5.3510 -1.1840 -2.4570 7 6 5.3104 -0.0182 -0.0171 8 6 6.8152 -0.0578 -0.0884 9 9 7.2212 0.0334 -1.4240 10 9 7.3448 1.0166 0.6345 11 6 4.6896 0.5086 1.0815 12 6 3.2774 0.5283 1.1106 13 6 2.5884 1.0597 2.2170 14 1 1.5845 1.4391 2.0966 15 6 3.2058 1.0965 3.4759 16 7 4.2680 0.3708 3.7040 17 14 2.5091 2.1829 4.8264 18 1 1.1137 1.7705 5.1230 19 1 3.3372 2.0426 6.0510 20 1 2.5224 3.5988 4.3788 21 1 7.1745 -0.9946 0.3375 22 1 5.2652 0.9010 1.9069 23 1 4.6508 0.3379 4.5947 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000238641079.mol2 23 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:41:06 Heat of formation + Delta-G solvation = -54.010832 kcal Electronic energy + Delta-G solvation = -16357.402506 eV Core-core repulsion = 13060.134762 eV Total energy + Delta-G solvation = -3297.267743 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 258.007 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -48.45850 -46.46592 -39.11331 -35.88586 -35.33415 -34.68094 -32.16832 -30.92062 -26.46800 -26.03165 -22.77989 -21.78050 -18.45304 -18.00987 -17.01257 -16.94113 -16.32852 -15.69702 -15.23235 -14.05167 -13.80922 -13.49005 -13.28291 -12.96065 -12.79863 -12.34780 -12.21617 -12.12788 -12.06735 -11.69081 -11.57131 -11.27548 -10.99751 -10.62537 -10.41869 -10.11490 -9.83766 -9.01266 -8.77288 -8.13195 -7.52110 -5.16391 1.53603 2.21678 2.72589 2.76389 2.77627 2.81161 3.43982 3.61403 3.69157 4.12080 4.26190 4.62035 4.90585 5.06676 5.17570 5.44090 5.95342 6.14446 6.34928 6.42110 6.71771 6.92502 7.13779 7.62477 7.87713 7.93031 8.47425 8.75029 9.35376 Molecular weight = 258.01amu Principal moments of inertia in cm(-1) A = 0.020787 B = 0.008853 C = 0.006391 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1346.682548 B = 3161.932995 C = 4380.401804 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.471 5.471 2 C 0.316 3.684 3 C 0.036 3.964 4 N -0.409 5.409 5 C 0.077 3.923 6 Cl -0.066 7.066 7 C -0.164 4.164 8 C 0.318 3.682 9 F -0.195 7.195 10 F -0.203 7.203 11 C -0.070 4.070 12 C 0.094 3.906 13 C -0.397 4.397 14 H 0.099 0.901 15 C 0.071 3.929 16 N -0.753 5.753 17 Si 0.927 3.073 18 H -0.257 1.257 19 H -0.269 1.269 20 H -0.253 1.253 21 H 0.116 0.884 22 H 0.154 0.846 23 H 0.300 0.700 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.511 0.388 1.225 6.636 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.151 5.151 2 C 0.003 3.997 3 C -0.103 4.103 4 N -0.119 5.119 5 C -0.096 4.096 6 Cl -0.038 7.038 7 C -0.169 4.169 8 C 0.264 3.736 9 F -0.176 7.176 10 F -0.184 7.184 11 C -0.095 4.095 12 C 0.086 3.914 13 C -0.424 4.424 14 H 0.117 0.883 15 C -0.155 4.155 16 N -0.374 5.374 17 Si 0.748 3.252 18 H -0.181 1.181 19 H -0.193 1.193 20 H -0.177 1.177 21 H 0.133 0.867 22 H 0.171 0.829 23 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 4.576 0.000 0.581 4.612 hybrid contribution 0.826 0.611 1.085 1.494 sum 5.401 0.610 1.666 5.685 Atomic orbital electron populations 1.81047 1.11987 1.12105 1.09939 1.24825 0.91505 0.91870 0.91518 1.15935 0.85014 1.13644 0.95666 1.66073 1.08022 1.12085 1.25712 1.19985 0.88406 1.10728 0.90522 1.98303 1.77078 1.85081 1.43348 1.20461 0.93921 1.05694 0.96780 1.20181 0.89792 0.88726 0.74893 1.93035 1.91793 1.97020 1.35772 1.92964 1.87799 1.59840 1.77818 1.21373 0.94328 0.97789 0.96042 1.18127 0.91793 0.89508 0.91943 1.19911 1.01520 1.29107 0.91840 0.88349 1.26295 0.93606 0.94437 1.01164 1.69574 1.15826 1.27025 1.24943 0.85993 0.80347 0.80811 0.78010 1.18068 1.19336 1.17732 0.86702 0.82852 0.88761 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -10.97 18.54 41.84 0.78 -10.20 14 2 C 0.32 7.32 14.30 -22.47 -0.32 7.00 14 3 C 0.04 0.83 6.66 -84.14 -0.56 0.27 14 4 N -0.41 -9.41 10.24 -7.52 -0.08 -9.49 14 5 C 0.08 1.63 7.23 -17.24 -0.12 1.51 14 6 Cl -0.07 -1.23 25.91 -51.86 -1.34 -2.57 14 7 C -0.16 -3.29 5.72 -104.80 -0.60 -3.89 14 8 C 0.32 5.38 5.46 36.01 0.20 5.57 14 9 F -0.20 -3.38 14.15 2.25 0.03 -3.35 14 10 F -0.20 -3.54 16.50 2.25 0.04 -3.51 14 11 C -0.07 -1.49 8.08 -38.97 -0.31 -1.80 14 12 C 0.09 2.13 5.61 -106.37 -0.60 1.54 14 13 C -0.40 -8.75 8.51 -37.87 -0.32 -9.07 14 14 H 0.10 2.15 7.28 -52.49 -0.38 1.77 14 15 C 0.07 1.42 5.20 -17.29 -0.09 1.33 14 16 N -0.75 -15.24 10.90 55.56 0.61 -14.63 14 17 Si 0.93 15.31 29.60 -169.99 -5.03 10.28 14 18 H -0.26 -4.34 7.11 56.52 0.40 -3.93 14 19 H -0.27 -4.26 7.11 56.52 0.40 -3.85 14 20 H -0.25 -4.20 7.11 56.52 0.40 -3.80 14 21 H 0.12 1.58 8.14 -51.93 -0.42 1.16 14 22 H 0.15 3.23 5.79 -52.48 -0.30 2.93 14 23 H 0.30 5.40 8.30 -40.82 -0.34 5.06 14 LS Contribution 243.44 15.07 3.67 3.67 Total: -1.00 -23.70 243.44 -4.31 -28.01 By element: Atomic # 1 Polarization: -0.42 SS G_CDS: -0.24 Total: -0.66 kcal Atomic # 6 Polarization: 5.18 SS G_CDS: -2.73 Total: 2.45 kcal Atomic # 7 Polarization: -35.62 SS G_CDS: 1.30 Total: -34.32 kcal Atomic # 9 Polarization: -6.92 SS G_CDS: 0.07 Total: -6.86 kcal Atomic # 14 Polarization: 15.31 SS G_CDS: -5.03 Total: 10.28 kcal Atomic # 17 Polarization: -1.23 SS G_CDS: -1.34 Total: -2.57 kcal Total LS contribution 3.67 Total: 3.67 kcal Total: -23.70 -4.31 -28.01 kcal The number of atoms in the molecule is 23 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000238641079.mol2 23 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.006 kcal (2) G-P(sol) polarization free energy of solvation -23.697 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.703 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.308 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.005 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.011 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds