Wall clock time and date at job start Mon Mar 30 2020 06:41:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.43201 * 179.97438 * 2 1 4 4 N 1.33199 * 119.44746 * 265.77614 * 3 2 1 5 5 C 1.31230 * 121.70770 * 180.24915 * 4 3 2 6 6 Cl 1.73602 * 119.80679 * 179.75791 * 5 4 3 7 7 C 1.41315 * 120.37835 * 359.47601 * 5 4 3 8 8 C 1.40888 * 120.55516 * 180.23316 * 7 5 4 9 9 H 1.08001 * 119.99828 * 24.53991 * 8 7 5 10 10 C 1.40237 * 120.00097 * 204.54089 * 8 7 5 11 11 N 1.30663 * 120.00219 * 14.96776 * 10 8 7 12 12 Si 1.86800 * 119.99915 * 194.96592 * 10 8 7 13 13 H 1.48498 * 109.47416 * 359.97438 * 12 10 8 14 14 H 1.48500 * 109.47127 * 120.00130 * 12 10 8 15 15 H 1.48508 * 109.47142 * 239.99865 * 12 10 8 16 16 C 1.41223 * 118.89029 * 0.25905 * 7 5 4 17 17 C 1.36707 * 118.42588 * 359.97438 * 16 7 5 18 18 C 1.50705 * 120.25519 * 179.97438 * 17 16 7 19 19 F 1.39902 * 109.46711 * 299.99811 * 18 17 16 20 20 F 1.39899 * 109.46925 * 59.99503 * 18 17 16 21 21 H 0.96997 * 120.00095 * 184.96617 * 11 10 8 22 22 H 1.08003 * 120.78788 * 179.97438 * 16 7 5 23 23 H 1.08992 * 109.47131 * 179.97438 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 7 3.2228 0.0864 1.1568 5 6 4.5341 0.0956 1.2080 6 17 5.3368 0.2154 2.7426 7 6 5.2963 0.0026 0.0217 8 6 6.7042 0.0072 0.0728 9 1 7.2131 -0.3116 0.9705 10 6 7.4450 0.4258 -1.0420 11 7 6.8575 1.0796 -2.0088 12 14 9.2716 0.0488 -1.1447 13 1 9.6924 -0.6963 0.0690 14 1 9.5398 -0.7759 -2.3502 15 1 10.0351 1.3194 -1.2344 16 6 4.6231 -0.0945 -1.2160 17 6 3.2561 -0.0951 -1.2149 18 6 2.4958 -0.1963 -2.5122 19 9 2.8295 0.8857 -3.3338 20 9 2.8306 -1.3920 -3.1568 21 1 7.3523 1.3061 -2.8117 22 1 5.1753 -0.1667 -2.1414 23 1 1.4253 -0.1814 -2.3080 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC000238643537.mol2 23 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:41:08 Heat of formation + Delta-G solvation = -74.774102 kcal Electronic energy + Delta-G solvation = -16327.801060 eV Core-core repulsion = 13029.632953 eV Total energy + Delta-G solvation = -3298.168106 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 258.007 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -50.01292 -47.99779 -40.77258 -37.69574 -37.06224 -36.32873 -33.63927 -32.69141 -28.49459 -27.30702 -24.84562 -22.87208 -20.28442 -19.80650 -18.69208 -18.25337 -17.79891 -17.24687 -16.83522 -15.74740 -15.53604 -14.90567 -14.89361 -14.38986 -14.34696 -14.15203 -13.99749 -13.90542 -13.72511 -13.42401 -13.04617 -12.76075 -12.26323 -12.22903 -11.95521 -11.64816 -11.41916 -10.63138 -10.49855 -9.82094 -9.05062 -6.77959 -0.12230 0.53285 1.15936 1.37417 1.43410 1.61846 1.72949 1.90632 2.12387 2.57305 2.71457 2.92140 3.19479 3.23270 3.59587 4.04376 4.31573 4.43869 4.69263 4.84133 5.13610 5.26758 5.51103 6.03211 6.23409 6.30022 6.47369 7.03821 7.85349 Molecular weight = 258.01amu Principal moments of inertia in cm(-1) A = 0.018107 B = 0.009588 C = 0.006619 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1545.966230 B = 2919.725245 C = 4229.522105 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.465 5.465 2 C 0.303 3.697 3 C 0.022 3.978 4 N -0.423 5.423 5 C 0.061 3.939 6 Cl -0.045 7.045 7 C 0.059 3.941 8 C -0.380 4.380 9 H 0.115 0.885 10 C 0.033 3.967 11 N -0.764 5.764 12 Si 0.994 3.006 13 H -0.246 1.246 14 H -0.258 1.258 15 H -0.262 1.262 16 C -0.103 4.103 17 C -0.140 4.140 18 C 0.324 3.676 19 F -0.201 7.201 20 F -0.201 7.201 21 H 0.312 0.688 22 H 0.144 0.856 23 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.875 -1.557 -1.895 5.457 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.145 5.145 2 C -0.009 4.009 3 C -0.114 4.114 4 N -0.134 5.134 5 C -0.115 4.115 6 Cl -0.017 7.017 7 C 0.051 3.949 8 C -0.406 4.406 9 H 0.133 0.867 10 C -0.192 4.192 11 N -0.385 5.385 12 Si 0.812 3.188 13 H -0.169 1.169 14 H -0.182 1.182 15 H -0.186 1.186 16 C -0.127 4.127 17 C -0.146 4.146 18 C 0.270 3.730 19 F -0.182 7.182 20 F -0.182 7.182 21 H 0.124 0.876 22 H 0.161 0.839 23 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 2.718 -1.300 -1.271 3.270 hybrid contribution 1.429 -0.003 -0.694 1.589 sum 4.148 -1.303 -1.965 4.771 Atomic orbital electron populations 1.81133 1.11648 1.13645 1.08068 1.25071 0.91589 0.91728 0.92536 1.14876 0.84657 1.23846 0.88063 1.66047 1.10218 1.08651 1.28456 1.21464 0.87889 1.15096 0.87073 1.98259 1.77479 1.96874 1.29119 1.18453 0.95326 0.91211 0.89882 1.20531 0.90485 1.28430 1.01106 0.86680 1.27191 1.07329 0.91080 0.93552 1.69661 1.42462 1.20327 1.06037 0.84924 0.73509 0.79701 0.80695 1.16917 1.18178 1.18617 1.21208 0.91362 1.01000 0.99154 1.20477 0.95623 1.05219 0.93247 1.20257 0.99105 0.71180 0.82498 1.92990 1.94649 1.55932 1.74640 1.92973 1.94636 1.47240 1.83393 0.87606 0.83888 0.85954 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 20. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -18.88 18.54 19.00 0.35 -18.53 14 2 C 0.30 12.38 13.70 88.33 1.21 13.59 14 3 C 0.02 0.96 6.60 40.60 0.27 1.23 14 4 N -0.42 -19.25 10.24 -177.65 -1.82 -21.07 14 5 C 0.06 2.69 7.35 85.54 0.63 3.32 14 6 Cl -0.05 -1.74 27.75 -2.72 -0.08 -1.82 14 7 C 0.06 2.62 5.60 -21.14 -0.12 2.50 14 8 C -0.38 -15.67 8.55 23.40 0.20 -15.47 14 9 H 0.12 4.45 7.10 -2.91 -0.02 4.43 14 10 C 0.03 1.23 5.22 85.35 0.45 1.68 14 11 N -0.76 -30.75 10.81 21.88 0.24 -30.52 14 12 Si 0.99 28.28 29.59 68.60 2.03 30.31 14 13 H -0.25 -6.83 7.11 99.48 0.71 -6.12 14 14 H -0.26 -7.10 7.11 99.48 0.71 -6.40 14 15 H -0.26 -7.31 7.11 99.48 0.71 -6.60 14 16 C -0.10 -4.55 8.29 22.64 0.19 -4.36 14 17 C -0.14 -5.85 5.38 -19.81 -0.11 -5.95 14 18 C 0.32 11.80 5.30 71.24 0.38 12.18 14 19 F -0.20 -7.60 17.26 44.97 0.78 -6.82 14 20 F -0.20 -7.31 17.26 44.97 0.78 -6.53 14 21 H 0.31 10.98 8.30 -92.71 -0.77 10.22 14 22 H 0.14 6.37 6.14 -2.91 -0.02 6.35 14 23 H 0.12 4.00 6.44 -2.39 -0.02 3.98 14 Total: -1.00 -47.07 246.73 6.67 -40.41 By element: Atomic # 1 Polarization: 4.56 SS G_CDS: 1.30 Total: 5.86 kcal Atomic # 6 Polarization: 5.62 SS G_CDS: 3.09 Total: 8.71 kcal Atomic # 7 Polarization: -68.89 SS G_CDS: -1.23 Total: -70.12 kcal Atomic # 9 Polarization: -14.91 SS G_CDS: 1.55 Total: -13.36 kcal Atomic # 14 Polarization: 28.28 SS G_CDS: 2.03 Total: 30.31 kcal Atomic # 17 Polarization: -1.74 SS G_CDS: -0.08 Total: -1.82 kcal Total: -47.07 6.67 -40.41 kcal The number of atoms in the molecule is 23 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000238643537.mol2 23 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.368 kcal (2) G-P(sol) polarization free energy of solvation -47.073 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.441 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.666 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.406 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.774 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds