Wall clock time and date at job start Mon Mar 30 2020 07:04:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.50704 * 109.62345 * 2 1 4 4 C 1.34488 * 125.77465 * 89.61113 * 3 2 1 5 5 C 1.41412 * 106.84905 * 180.02562 * 4 3 2 6 6 C 1.34657 * 106.82996 * 359.97438 * 5 4 3 7 7 Cl 1.73599 * 125.79963 * 180.02562 * 6 5 4 8 8 O 1.34305 * 108.39491 * 0.26870 * 6 5 4 9 9 O 1.43748 * 109.50780 * 120.31695 * 2 1 3 10 10 C 1.44786 * 104.81532 * 95.49880 * 9 2 1 11 11 C 1.54911 * 101.72126 * 36.10216 * 10 9 2 12 12 H 1.08992 * 110.69722 * 82.83890 * 11 10 9 13 13 C 1.50701 * 110.84121 * 205.97498 * 11 10 9 14 14 H 1.08007 * 119.99997 * 355.19172 * 13 11 10 15 15 C 1.37875 * 120.00462 * 175.19459 * 13 11 10 16 16 N 1.31522 * 119.99338 * 359.97438 * 15 13 11 17 17 Si 1.86793 * 120.00386 * 179.97438 * 15 13 11 18 18 H 1.48501 * 109.47155 * 0.02562 * 17 15 13 19 19 H 1.48501 * 109.47144 * 120.00138 * 17 15 13 20 20 H 1.48498 * 109.47062 * 239.99807 * 17 15 13 21 21 O 1.43368 * 109.63350 * 239.60844 * 2 1 3 22 22 H 1.09001 * 109.47217 * 60.00621 * 1 2 3 23 23 H 1.09000 * 109.46889 * 179.97438 * 1 2 3 24 24 H 1.08996 * 109.47200 * 299.99474 * 1 2 3 25 25 H 1.07997 * 126.58093 * 0.04891 * 4 3 2 26 26 H 1.08005 * 126.58679 * 180.02562 * 5 4 3 27 27 H 1.08996 * 110.97543 * 277.98703 * 10 9 2 28 28 H 1.09002 * 111.00783 * 154.22435 * 10 9 2 29 29 H 0.97002 * 119.99138 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0361 1.4195 0.0000 4 6 2.2932 2.1625 1.0911 5 6 2.7448 3.4217 0.6325 6 6 2.7371 3.3722 -0.7132 7 17 3.2041 4.6601 -1.7794 8 8 2.3016 2.1589 -1.0901 9 8 2.0100 -0.6840 1.1697 10 6 2.2601 -2.0403 0.7289 11 6 2.7857 -1.8116 -0.7102 12 1 3.8485 -1.5702 -0.6984 13 6 2.5252 -3.0186 -1.5742 14 1 2.1017 -3.9123 -1.1400 15 6 2.8276 -2.9822 -2.9189 16 7 3.3429 -1.8938 -3.4477 17 14 2.5054 -4.4785 -3.9896 18 1 1.9255 -5.5652 -3.1601 19 1 1.5520 -4.1183 -5.0696 20 1 3.7821 -4.9414 -4.5905 21 8 2.0117 -0.6831 -1.1648 22 1 -0.3634 0.5137 -0.8900 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5137 0.8900 25 1 2.1774 1.8563 2.1203 26 1 3.0401 4.2615 1.2440 27 1 1.3395 -2.6237 0.7202 28 1 3.0174 -2.5194 1.3494 29 1 3.5559 -1.8683 -4.3937 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000258908301.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:04:41 Heat of formation + Delta-G solvation = -69.453411 kcal Electronic energy + Delta-G solvation = -17478.887429 eV Core-core repulsion = 14395.577905 eV Total energy + Delta-G solvation = -3083.309525 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 258.049 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -42.35501 -39.40742 -36.81622 -34.17920 -32.99424 -32.76181 -31.37724 -28.35220 -27.95412 -24.88070 -22.58852 -21.85464 -21.00293 -19.94684 -17.70498 -16.87263 -16.22670 -16.04898 -15.61773 -14.76762 -14.08567 -13.95846 -13.18268 -13.06258 -12.74230 -12.61169 -12.53537 -12.16183 -11.97023 -11.86386 -11.60248 -11.29264 -11.10566 -10.98650 -10.57940 -10.33337 -9.72442 -9.53538 -9.31199 -8.75780 -8.37960 -8.14461 -6.15618 -4.33006 1.38203 1.81051 2.73661 3.22857 3.31053 3.33895 3.46561 4.29521 4.47712 4.72868 5.13590 5.18730 5.31524 5.69866 5.77369 5.84876 5.93977 5.97004 6.00106 6.06941 6.23609 6.34265 6.47720 6.56587 6.60453 7.21437 7.35798 7.71822 7.99398 8.26461 8.76912 9.39905 10.91501 Molecular weight = 258.05amu Principal moments of inertia in cm(-1) A = 0.024225 B = 0.006681 C = 0.005584 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1155.575644 B = 4189.724469 C = 5013.334918 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C 0.324 3.676 3 C 0.024 3.976 4 C -0.196 4.196 5 C -0.179 4.179 6 C 0.015 3.985 7 Cl 0.014 6.986 8 O -0.141 6.141 9 O -0.382 6.382 10 C 0.022 3.978 11 C 0.184 3.816 12 H 0.044 0.956 13 C -0.544 4.544 14 H 0.070 0.930 15 C 0.080 3.920 16 N -0.855 5.855 17 Si 0.898 3.102 18 H -0.270 1.270 19 H -0.281 1.281 20 H -0.281 1.281 21 O -0.343 6.343 22 H 0.071 0.929 23 H 0.075 0.925 24 H 0.066 0.934 25 H 0.158 0.842 26 H 0.156 0.844 27 H 0.069 0.931 28 H 0.095 0.905 29 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.601 8.174 7.061 11.110 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.214 4.214 2 C 0.244 3.756 3 C -0.028 4.028 4 C -0.215 4.215 5 C -0.200 4.200 6 C -0.062 4.062 7 Cl 0.043 6.957 8 O -0.038 6.038 9 O -0.303 6.303 10 C -0.054 4.054 11 C 0.130 3.870 12 H 0.061 0.939 13 C -0.581 4.581 14 H 0.088 0.912 15 C -0.127 4.127 16 N -0.490 5.490 17 Si 0.724 3.276 18 H -0.194 1.194 19 H -0.207 1.207 20 H -0.207 1.207 21 O -0.263 6.263 22 H 0.090 0.910 23 H 0.094 0.906 24 H 0.084 0.916 25 H 0.175 0.825 26 H 0.174 0.826 27 H 0.088 0.912 28 H 0.113 0.887 29 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -2.529 8.430 6.487 10.933 hybrid contribution 0.037 -0.492 -0.665 0.828 sum -2.492 7.937 5.822 10.154 Atomic orbital electron populations 1.22279 0.92994 1.03667 1.02440 1.21174 0.92039 0.83121 0.79236 1.22828 1.02348 0.94320 0.83327 1.21467 1.07032 0.93078 0.99960 1.21450 1.07085 0.99930 0.91500 1.22411 1.08624 0.85140 0.89989 1.98394 1.89854 1.40539 1.66946 1.84066 1.64080 1.20634 1.34975 1.89038 1.86513 1.23543 1.31255 1.24658 1.00797 0.82057 0.97872 1.21417 0.92308 0.84991 0.88325 0.93851 1.20970 1.45975 0.96952 0.94196 0.91164 1.25092 0.93462 0.96032 0.98148 1.70063 1.39370 1.26685 1.12855 0.86463 0.78146 0.82512 0.80446 1.19441 1.20665 1.20707 1.89385 1.69669 1.42824 1.24453 0.90964 0.90632 0.91551 0.82482 0.82623 0.91238 0.88716 0.92566 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.79 9.17 37.16 0.34 -2.45 15 2 C 0.32 6.89 1.40 -27.88 -0.04 6.85 15 3 C 0.02 0.48 6.11 -35.63 -0.22 0.27 15 4 C -0.20 -3.34 10.38 -39.70 -0.41 -3.75 15 5 C -0.18 -2.77 10.88 -39.64 -0.43 -3.20 15 6 C 0.02 0.26 7.94 29.46 0.23 0.50 15 7 Cl 0.01 0.20 29.30 -51.86 -1.52 -1.32 15 8 O -0.14 -3.01 10.60 -0.99 -0.01 -3.02 15 9 O -0.38 -7.77 10.62 -59.04 -0.63 -8.40 15 10 C 0.02 0.45 7.33 38.17 0.28 0.73 15 11 C 0.18 4.70 3.50 -26.87 -0.09 4.60 15 12 H 0.04 1.20 8.14 -51.93 -0.42 0.78 15 13 C -0.54 -14.64 8.84 -34.44 -0.30 -14.94 15 14 H 0.07 1.79 7.78 -52.48 -0.41 1.38 15 15 C 0.08 2.21 5.42 -17.82 -0.10 2.12 15 16 N -0.85 -25.15 12.95 55.43 0.72 -24.43 15 17 Si 0.90 20.72 29.54 -169.99 -5.02 15.70 15 18 H -0.27 -6.03 7.11 56.52 0.40 -5.63 15 19 H -0.28 -6.50 7.11 56.52 0.40 -6.10 15 20 H -0.28 -6.41 7.11 56.52 0.40 -6.01 15 21 O -0.34 -8.97 10.06 -62.81 -0.63 -9.60 15 22 H 0.07 1.28 8.14 -51.93 -0.42 0.85 15 23 H 0.07 1.32 8.14 -51.93 -0.42 0.89 15 24 H 0.07 1.00 8.14 -51.93 -0.42 0.58 15 25 H 0.16 2.34 8.06 -52.49 -0.42 1.92 15 26 H 0.16 1.84 8.06 -52.48 -0.42 1.42 15 27 H 0.07 1.34 8.04 -51.93 -0.42 0.92 15 28 H 0.09 1.70 8.14 -51.93 -0.42 1.27 15 29 H 0.26 7.32 8.31 -40.82 -0.34 6.98 15 LS Contribution 276.32 15.07 4.16 4.16 Total: -1.00 -30.33 276.32 -6.59 -36.92 By element: Atomic # 1 Polarization: 2.19 SS G_CDS: -2.92 Total: -0.73 kcal Atomic # 6 Polarization: -8.54 SS G_CDS: -0.74 Total: -9.28 kcal Atomic # 7 Polarization: -25.15 SS G_CDS: 0.72 Total: -24.43 kcal Atomic # 8 Polarization: -19.76 SS G_CDS: -1.27 Total: -21.03 kcal Atomic # 14 Polarization: 20.72 SS G_CDS: -5.02 Total: 15.70 kcal Atomic # 17 Polarization: 0.20 SS G_CDS: -1.52 Total: -1.32 kcal Total LS contribution 4.16 Total: 4.16 kcal Total: -30.33 -6.59 -36.92 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000258908301.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.536 kcal (2) G-P(sol) polarization free energy of solvation -30.328 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.864 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.589 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.917 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.453 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds